BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492160
Length=1397
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26520.1 | Symbols: | Aldolase superfamily protein | chr4:1... 1984 0.0
AT4G26530.1 | Symbols: | Aldolase superfamily protein | chr4:1... 1524 0.0
> AT4G26520.1 | Symbols: | Aldolase superfamily protein | chr4:13388386-13390374
FORWARD LENGTH=1550
Length=1550
Score = 1984 bits (1074), Expect = 0.0
Identities = 1186/1241 (96%), Gaps = 3/1241 (0%)
Strand=Plus/Plus
Query 158 ATGTCTGCTTTTGTTGGCAAATACGCAGATGAGCTGATCAAGACGGCCAAGTACATTGCA 217
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 291 ATGTCTGCTTTTGTCAGCAAATACGAAGATGAGCTGATCAAGACGGCCAAGTACATTGCA 350
Query 218 ACGCCGGGAAGGGGCATTTTGGCGGCAGACGAGAGCACAGAAACCATCGGGAAACGATTC 277
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 351 ACGCCGGGAAGGGGCATTTTGGCGGCAGATGAGAGCACAGAAACCATTGGGAAACGATTC 410
Query 278 GCTGGAATCAATGTTGAGAACATTGTGTCCAACCGCCAAGCTTACCGAGAGCTCCTCTTC 337
|| ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||
Sbjct 411 GCCGGAATCAATGTTGAGAACACTGAGTCCAACCGCCAAGCTTACCGTGAGCTCCTCTTC 470
Query 338 ACTTCCCCTGGCAGTTACCCTTGCCTCTCTGGTGTTATACTCTTCGAGGAAACCCTCTAC 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 471 ACTTCCCCTGGCAGTTACCCTTGCCTCTCTGGTGTTATACTCTTCGAGGAAACCCTCTAC 530
Query 398 CAGAAAACCTCTGATGGAAAACCCTTCGTCGATCTCCTCATGGAGAACGGCGTTATCCCC 457
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 531 CAGAAAACCTCTGATGGCAAACCCTTCGTCGATCTCCTCATGGAGAACGGTGTTATCCCC 590
Query 458 GGAATCAAAGTGGACAAGGGTTTGGTTGATCTAGCAGGAACCAACGGCGAGACCACTACT 517
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 591 GGAATCAAAGTGGACAAGGGTTTGGTTGATCTAGCAGGGACCAACGGCGAGACCACTACT 650
Query 518 CAGGGTCTAGACTCGCTTGGTGCACGGTGCCAGGAGTATTACAAGGCAGGAGCCCGGTTT 577
|| |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct 651 CAAGGTCTAGACTCGCTTGGTGCACGGTGTCAGCAGTATTACGAGGCAGGAGCCCGGTTT 710
Query 578 GCTAAATGGCGTGCATTCTTCAAGATTGGGGCCACTGAGCCAAGCGCTCTCTCGATCCAA 637
||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||
Sbjct 711 GCTAAATGGCGTGCATTCTTCAAGATTGGGGCCACCGAGCCAAGCGTTCTCTCCATCCAA 770
Query 638 GAGGACGCCAAGGTGCTAGCCCGCTATGCCATCATCTGCCAGGAGAACGGACTTGTCCCG 697
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 771 GAGGACGCCAGGGTGCTAGCCCGCTATGCCATCATCTGCCAGGAGAATGGACTTGTCCCG 830
Query 698 ATCGTCGAGCCAGAGGTGCTGACCGGTGGGAGCCACGACATCAAGAAATGTGCGGCGGTG 757
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 831 ATCGTCGAGCCAGAGGTGCTGACAGGTGGGAGCCACGACATCAAGAAATGTGCGGCGGTG 890
Query 758 ACCGAGACGGTTCTTGCTGCCGTGTTCAAGGCCTTGAACGACCACCATGTCCTCCTCGAA 817
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 891 ACTGAGACGGTTCTTGCTGCCGTGTTCAAGGCCTTGAACTACCACCATGTCCTCCTCGAA 950
Query 818 GGCACTCTGCTTAAACCTAACATGGTCACTCCCGGCTCCGACAGCCCAAAGGTTGCACCG 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 GGCACTCTGCTTAAACCTAACATGGTCACTCCCGGCTCCGACAGCCCAAAGGTTGCACCG 1010
Query 878 GAAGTAATCGCAGAATACACGGTGACTGCTCTGCGCCGCACAGTCCCACCAGCTATTCCG 937
||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 GAACTAATTGCGGAATACACGGTGACTGCTCTGCGCCGCACAGTCCCACCAGCTATTCCG 1070
Query 938 GGAATCGTGTTCCTCTCAGGCGTACAGCGGGAAGAGCAAGCGACACTAAATCTAAACGCA 997
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 1071 GGAATCGTGTTCCTCTCAGGCATACAGCGCGAAGAGCAAGCGACACTAAATCTAAACGCA 1130
Query 998 ATGAACAAGCTTGATGTGTTGAAGCCATGGACGCTCACTTTCTCTTTTGGCGGAGCCCTC 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 ATGAACAAGCTTGATGTGTTGAAGCCATGGACGCTCACTTTCTCTTTTGGCGGAGCCCTC 1190
Query 1058 CAGCAAAGCGCTCTCAAGGCTTGGGCCGGTAAGACCGAGAACGTAGCCAAAGCTCAAGCC 1117
|||||||| ||| |||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 1191 CAGCAAAGTGCTATCAAGGCTTGGGCCGGTAAGCCCGAGAACGTAGCCAAAGCTCAGGCC 1250
Query 1118 AAGTTCCTGACCAGGTGCAAGGCTAACTCGGATGCTACCCTCGGGAAATACACCGGCTGG 1177
||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 1251 AAGTTCCTGACCAGGTGCAAGGCTAACAAGGACGCTACCCTCGGGAAATACACCGGCTGG 1310
Query 1178 GCTTCTGGTGACTCAGCCGCCTCCGAGAACTTGGTTGTGATAGGATACAGGTACTAGGAT 1237
|||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1311 GCTTCTGGTGACTCGGCCGCTTTCGAGAACTTGGTTGTGATAGGATACAGGTACTAGGAT 1370
Query 1238 TGTTTGAGAACGGGCGTTCGCCTTTGATGCGGTTTGAGTATATGTCTAATATTTCGT-TG 1296
|||||||||||||||| ||||||||||||||||||||| || |||||| |||||| ||
Sbjct 1371 CCTTTGAGAACGGGCGTTTGCCTTTGATGCGGTTTGAGTAGATATCTAATGTTTCGTGTG 1430
Query 1297 GTGTTGTAACTGTTTGAATGTTCAGTTTTGCAAATTGCTAATAATTGTTATTTTTCCTGT 1356
|||| |||||||||||||||||| ||||||| | ||||||||||||||||||| || ||
Sbjct 1431 -TGTTTTAACTGTTTGAATGTTCAATTTTGCAGACTGCTAATAATTGTTATTTT-CCGGT 1488
Query 1357 TACTGTCAAGCTATCCATGTGAGATTCACGTTTTGAAAAGC 1397
||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1489 TACTGTCAAACTATCCATGTGAAATTCACGTTTTGAAAAGC 1529
Score = 224 bits (121), Expect = 2e-57
Identities = 138/146 (95%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 1 TCTTCTCCACATATCCAAGACTTTGGAGATAAAGCTGGTATCCTTGGCTGGCATTTGGTA 60
||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 101 TCTCCTCCACATATCCAAGACTTTGGAGATAATGCTGGTATCCTTGGCTAGCATTTGGTA 160
Query 61 GTGTCGAAGCAATCATTCATCGGGCTCTCCTTTCTAACTGTATATTCCTAGAAGATATTA 120
|||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct 161 GTGTCGAAGCAATCATTCCTCGGGCTCTCCTTTCTAACTG--CATTCCTAGAAAATATTA 218
Query 121 CCCTAAAGGCCTTTGTCTTGGCATCC 146
||||||||||||||||||||||||||
Sbjct 219 CCCTAAAGGCCTTTGTCTTGGCATCC 244
> AT4G26530.1 | Symbols: | Aldolase superfamily protein | chr4:13391344-13393107
FORWARD LENGTH=1372
Length=1372
Score = 1524 bits (825), Expect = 0.0
Identities = 1068/1186 (90%), Gaps = 14/1186 (1%)
Strand=Plus/Plus
Query 136 TCTTGGCA-TCCAAACAGCAACGATGTCTGCTTTTGTTGGCAAATACGCAGATGAGCTGA 194
|||| ||| |||||| |||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 104 TCTT-GCACTCCAAAAAGCAACCATGTCTGCTTTTGTCGGCAAATACGCAGATGAGCTGA 162
Query 195 TCAAGACGGCCAAGTACATTGCAACGCCGGGAAGGGGCATTTTGGCGGCAGACGAGAGCA 254
| |||||||| ||||||||||| || ||||||| |||||||||||| |||||||||||||
Sbjct 163 TAAAGACGGCTAAGTACATTGCCACACCGGGAAAGGGCATTTTGGCAGCAGACGAGAGCA 222
Query 255 CAGAAACCATCGGGAAACGATTCGCTGGAATCAATGTTGAGAACATTGTGTCCAACCGCC 314
| | ||| || |||||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct 223 CGGGAACTATTGGGAAACGATTCGCCAGCATCAATGTTGAGAACATTGAGTCCAACCGCC 282
Query 315 AAGCT-TACCGAGAGCTCCTCTTCACTTCCCCTGGCAGTTACCCTTGCCTCTCTGGTGTT 373
||||| | ||| |||||||||||||| |||||||||| || |||||||||||| ||||||
Sbjct 283 AAGCTCT-CCGTGAGCTCCTCTTCACGTCCCCTGGCACTTTCCCTTGCCTCTCCGGTGTT 341
Query 374 ATACTCTTCGAGGAAACCCTCTACCAGAAAACCTCTGATGGAAAACCCTTCGTCGATCTC 433
|| |||||||||||||||||||||||||||||| | ||||| ||||||||||| || |||
Sbjct 342 ATCCTCTTCGAGGAAACCCTCTACCAGAAAACCACGGATGGCAAACCCTTCGTTGAGCTC 401
Query 434 CTCATGGAGAACGGCGTTATCCCCGGAATCAAAGTGGACAAGGGTTTGGTTGATCTAGCA 493
|||||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 402 CTCATGGAAAACGGAGTTATCCCTGGAATCAAAGTGGACAAGGGTGTGGTTGATCTAGCA 461
Query 494 GGAACCAACGGCGAGACCACTACTCAGGGTCTAGACTCGCTTGGTGCACGGTGCCAGGAG 553
|||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct 462 GGAACCAATGGCGAGACCACTACTCAGGGTCTAGATTCACTTGGTGCACGTTGCCAGGAG 521
Query 554 TATTACAAGGCAGGAGCCCGGTTTGCTAAATGGCGTGCATTCTTCAAGATTGGGGCCACT 613
||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||
Sbjct 522 TATTACAAGGCAGGAGCTCGGTTTGCAAAATGGCGTGCAGTCCTCAAGATTGGGGCCACC 581
Query 614 GAGCCAAGCGCTCTCTCGATCCAAGAGGACGCCAAGGTGCTAGCCCGCTATGCCATCATC 673
|||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 582 GAGCCAAGCGAGCTCTCTATCCAAGAGAACGCCAAGGGGCTAGCCCGCTATGCCATCATC 641
Query 674 TGCCAGGAGAACGGACTTGTCCCGATCGTCGAGCCAGAGGTGCTGACCGGTGGGAGCCAC 733
||||||||||| ||||| ||||| ||||||||||||||||| ||||||| ||||||||
Sbjct 642 TGCCAGGAGAATGGACTCGTCCCAATCGTCGAGCCAGAGGTACTGACCGACGGGAGCCAT 701
Query 734 GACATCAAGAAATGTGCGGCGGTGACCGAGACGGTTCTTGCTGCCGTGTTCAAGGCCTTG 793
||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||
Sbjct 702 GACATCAAGAAATGTGCAGCGGTGACCGAGACCGTTCTTGCTGCCGTGTACAAGGCCTTG 761
Query 794 AACGACCACCATGTCCTCCTCGAAGGCACTCTGCTTAAACCTAACATGGTCACTCCCGGC 853
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 762 AACGACCACCATGTCCTCCTCGAAGGCACTCTGCTTAAACCGAACATGGTCACTCCCGGC 821
Query 854 TCCGACAGCCCAAAGGTTGCACCGGAAGTAATCGCAGAATACACGGTGACTGCTCTGCGC 913
|| |||||||||||||||||||||||||| || || |||||||| |||||||||||||||
Sbjct 822 TCTGACAGCCCAAAGGTTGCACCGGAAGTGATAGCGGAATACACAGTGACTGCTCTGCGC 881
Query 914 CGCACAGTCCCACCAGCTA-TTCCGGGAATCGTGTTCCTCTCAGGCGTACAGCGGGAAGA 972
|||||||||||||| || | |||| |||||||||||||||||||||| |||| | |||||
Sbjct 882 CGCACAGTCCCACCTGC-AGTTCCAGGAATCGTGTTCCTCTCAGGCGGACAGAGTGAAGA 940
Query 973 GCAAGCGACACTAAATCTAAACGCAATGAACAAGCTTGATGTGTTGAAGCCATGGACGCT 1032
| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 941 GGAAGCAACACTAAATCTGAACGCAATGAACAAGCTCGATGTGTTGAAGCCATGGACTCT 1000
Query 1033 CACTTTCTCTTTTGGCGGAGCCCTCCAGCAAAGCGCTCTCAAGGCTTGGGCCGGTAAGAC 1092
||||||||| |||||| |||||||||| |||||| |||||||||||||||| ||||||||
Sbjct 1001 CACTTTCTCATTTGGCCGAGCCCTCCAACAAAGCACTCTCAAGGCTTGGGCAGGTAAGAC 1060
Query 1093 CGAGAACGTAGCCAAAGCTCAAGCCAAGTTCCTGACCAGGTGCAAGGCTAACTCGGATGC 1152
||||| |||||||||||||| |||| ||||||||||||||||||| ||||||||| ||
Sbjct 1061 AGAGAATGTAGCCAAAGCTCAGGCCACTTTCCTGACCAGGTGCAAGGGTAACTCGGACGC 1120
Query 1153 TACCCTCGGGAAATACACCGGCTGGGCTTCTGGTGACTCAGCCGCCTCCGAGAACTTGGT 1212
|||||||||||||||||||||| |||||||||||||||| |||||||| |||| |||| |
Sbjct 1121 TACCCTCGGGAAATACACCGGCGGGGCTTCTGGTGACTCGGCCGCCTCTGAGAGCTTG-T 1179
Query 1213 -TGTG-ATAGGATACAGGTACTAGGATTGTTTGAGA-ACGGGCGTTCGCCTTTGATGCGG 1269
|| | | |||||||| ||| ||||| |||| | | ||||| || ||||||| || ||
Sbjct 1180 ATGAGGA-AGGATACAAGTATTAGGAGCGTTTAA-ATACGGGTGT-CGCCTTTTATACGA 1236
Query 1270 TTTGAGTATATGTCTAATATTTCGTTGGTGTTGTAACTGTTTGAAT 1315
||||| |||||||| ||| |||||| || ||| ||||||||| |||
Sbjct 1237 TTTGAATATATGTCAAATGTTTCGTAGGCGTT-TAACTGTTTAAAT 1281
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68824947195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5