BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492167
Length=3770
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26450.1 | Symbols: | unknown protein; Has 614 Blast hits t... 3013 0.0
AT4G26455.1 | Symbols: WIP1 | WPP domain interacting protein 1 ... 2109 0.0
AT5G47818.1 | Symbols: | unknown pseudogene | chr5:19364137-19... 385 2e-105
> AT4G26450.1 | Symbols: | unknown protein; Has 614 Blast hits
to 492 proteins in 137 species: Archae - 0; Bacteria - 94;
Metazoa - 255; Fungi - 76; Plants - 69; Viruses - 0; Other Eukaryotes
- 120 (source: NCBI BLink). | chr4:13362556-13364935
FORWARD LENGTH=2142
Length=2142
Score = 3013 bits (1631), Expect = 0.0
Identities = 1972/2126 (93%), Gaps = 65/2126 (3%)
Strand=Plus/Plus
Query 1 ATGCATGCTAGGCAACGCAATGTTGGGAATGGTTACAGATCTGGTTCTATTGGAATGGGG 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1 ATGCATGCTAGGCAACGCAATGTTGGGAATGGGTACAGATCTGGTTCTATTGGGATGGGT 60
Query 61 ATGTCTGGTTCTAGAATTTCCCCTGAGCGTCCTATGAGAGGACATGGCTTCTA------T 114
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
Sbjct 61 ATGTCTGGTTCTAGAATTTCTCCTGAGCGTCCTATGAGAGGACATGGGTTCTATGGTTCT 120
Query 115 GAACACCAACACCGTGGCTTTAACCGTGGATATGGACGAGGTAGGGGACGCTCTAAATCA 174
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 121 GAACACCAACACCGTGGCTTTAACCGTGGATATGGACGTGGAAGGGGACGCTCTAAATCA 180
Query 175 TACCACAATCAGCTGCCTCCGCCTCTGCCTCCTCCACCGGTGCAGCGTAGAAGCAGTGGC 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TACCACAATCAGCTGCCTCCGCCTCTGCCTCCTCCACCGGTGCAGCGTAGAAGCAGTGGC 240
Query 235 GGTGGTGGTGACGTTTTCATGGAGGCTGGTCGTCTAGCAACAGAGTACTTGGTTTCTCAG 294
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 241 ------GGTGACGTTTTCATGGAGGCAGGTCGTCTAGCAACAGAGTACTTGGTTTCTCAA 294
Query 295 GGTGTTCTACCACAAACTGTGCTTTCCAGTAAATGGCAGAATGGTAATTTTAGGAAGCAA 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 GGTGTTCTACCACAAACTGTGCTTTCCAGTAAATGGCAGAATGGTAATTTTAGGAAGCAA 354
Query 355 GCTGGAGAGTTTCAGAGTTCCAGGTCACAAGAAGCAGCTCGAATGGATGTTTCAGCTCCA 414
|||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct 355 GCTGGAGAGTTTCAGAGTTCCAGGTCTCAAGAAGAAGCCCGAATGGATGTTTCAGCTCCA 414
Query 415 GCCGCAGATAAGAGGAGGTATATTGATGGCTATAGCTCAGCTGGCTCCAGGAATAGCTTG 474
|| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 415 GCTGCAGAGAAAAGGAGGTATATTGATGGCTATAGCTCAGCTGGATCCAGGAATAGCTTG 474
Query 475 AAAGGAAGGAGATCCAACCGTTATGACTCGGATTTCGGGAGGAGCGGATCTTGGTTAGAG 534
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 475 AAAGGAAGGAGATCCCACCGTTATGACTCGGATTTTGGGAGGAGCGGATCTTGGTCAGAG 534
Query 535 AGAACTAAAGCTTTTGAGACCGAGACTGGTGACGACTCTGTGTCTGGGCATCAAGAAGAG 594
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 535 AGAAGTAAAGCTTTTGAGACTGAGACTGGTGACGACTCTGTGTCTGGGCATCAAGAAGAG 594
Query 595 CAGCCGCTTGCTGAAGATATTGCTAGCTCGGTTCAGCGGTCAGCCTCCGGTGAATTTTTG 654
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 595 CAGCCGCTTGCTGAAGATATTGCTAGCTCGGTTCAGCGGTCAGCCTCTGGTGAATTTATG 654
Query 655 AGAAAGTGTGAAGGAGCTGGTGATTCTGAGTCTATGTTGGAAAAGTACAATCTCCAGGAT 714
||||| ||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||
Sbjct 655 AGAAAATGTGAAGGAGCAGGTGATTCCGAGTCTGTGTTGGACAAGTACAATCTCCAGGAT 714
Query 715 GAGGCACAGTCTAAGACAGGATCCTCGAGTGCCGGGAAAGAAATAGTACACGATTGTGAA 774
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct 715 GAGGCACAGTCTAAGACAGGTTCCTCGAGTGCCGGGAAAGATATAGTACAGGATTGTGAA 774
Query 775 ATCTCAAAAGTATCAGAAGGCTCTTCTAGTTTGAGTGCTGGATCAGGAGAGATGAAAGGT 834
||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 775 ATCTCTAAAGTATCCGAAGGCTCTTCTAGCTTGAGTGCTGGATCAGGAGAGATGAAAGGT 834
Query 835 AGGTCTGGTGGTAATGGTGGAGAGAATGAGAACCAGTCTGCTATCGAAGATGGATCTATC 894
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 835 AGGTCTGGTGGTAATGGTGGAGAGGATGAGAACCAGACTGCTATCGAAGATGGATCTATC 894
Query 895 CATCAACGTTCTGAAGATGCATCTATTGATCAACAGTGTGGGGCTGATGAATCATTCACC 954
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 CATCAACGTTGTGAAGATGCATCTATTGATCAACAGTGTGGGGCTGATGAATCATTCACC 954
Query 955 AAGAGTGGTATTGATTTGGCAACGCTGTGTAAATTTGAGAAGGTGCCTACGAGAACACGC 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 955 AAGAGTGGTATTGATTTGGCAACGCTGTGTAAATTTGAGAAGGTGCCTACGAGGACACGC 1014
Query 1015 TCTTCTCTGACTGCAAAGGGCCCAAAGCTTTATTTGAGTCAAAATATCAAGGATAACTCT 1074
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 1015 TCTTCTCTGACTGCAAAAGGCCCAAAGCTTTATTTGAGTCATAATATCAAGGATACCTCT 1074
Query 1075 CATAATTCTGGACTTCTAGAAGAAGATCAAACCGAAAATCGATGTGAGACTCGAGGCCAA 1134
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075 CATAATTCTGGACTTGAAGAAGAAGATCAAACCGAAAATCGATGTGAGACTCGAGGCCAA 1134
Query 1135 TCATCTGGAACGGCCGATAATACTGGTGATGAAAATTTCAATGACCAAGTTGAAGATCTG 1194
|||||||||| |||||||| |||||||||||||||| ||||||||||||||| |
Sbjct 1135 TCATCTGGAAAGGCCGATAGTACTGGTGATGAAAAT------GACCAAGTTGAAGATTTT 1188
Query 1195 GCACTTGTTCAATATGAT-GAGAACAGTAAATGTCATAGGTCTAATTCTTT-CCCTAGTA 1252
|| |||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1189 GCTCTTGTTCAATAT-ATTGAGAACAGTAAATGTCATAGGTCTAATTCTTTTCCC-AGTA 1246
Query 1253 GCATTCTCAGGGATAACAGTGAGAAAGATTCAGGATTAGAATTGCCTAATCTGCACAGAT 1312
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1247 GCATTCTCAGGGATAACAGTGAGAAAGAATCAGGATTAGAATTGCCTAATCTGCACAGAT 1306
Query 1313 CACATTCGGTGGGGAAAGTAGGTGAGAAACGGGCTGGTGAAGGCGGCAGTGACTTGGAGG 1372
||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct 1307 CACATTCGGTGGGGAAAGTAGGTGAGAAAAGGCCTGGTGAAGGC---AGTGACTTGGAGG 1363
Query 1373 AGAAAGCAAAAAGACAGAGAGATTGGGTGCCTTTGCCAGTCCCTGAAGCCAATGAACGCC 1432
|| | ||||||||||||||||||||||| || ||| ||||||| |||||||||
Sbjct 1364 AGGGATCAAAAAGACAGAGAGATTGGGTG-----GC-AGTTTCTGAAGCTAATGAACGCT 1417
Query 1433 TCAACATATTTAAGACAAGCA-AAACCCAATGCAATCCAGAAGAAGAAGAAAAGACAAGC 1491
||||||| ||||| |||||| ||||| ||||| |||| |||||||||| ||||||||||
Sbjct 1418 TCAACATGTTTAAAACAAGCGGAAACC-AATGCGATCCGGAAGAAGAAGGAAAGACAAGC 1476
Query 1492 TCGTTCAACAAAAGACTGATTGATGGTGCTACTGGAAGAAGGGTCAGCCATGAAAATCTG 1551
||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||
Sbjct 1477 TCGTTCAACAAAAGACTGATTGACGGTGCTGCTGGAAAAAGGGTCAGCCATGAAAGTCTG 1536
Query 1552 GTTAATAACTCTACACACAATAGGACACACACTGGCAAAACAGGTCCAGGGTATGCTGAA 1611
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1537 GTTAATAACTCTACATACAATAGGACACACACTGGCAGAACAGGTCCAGGGTATGCTGAA 1596
Query 1612 GAACATCAGCTGTTTCCTGCTTCGTTTAAAATCTGTGACCTAAATCTAGGGGGAGCGTCG 1671
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1597 GAACATCAGCTGTTTCCTGCTTCGTTTAAGATGTGTGACCTAAATCTAGGGGGAGCGTCG 1656
Query 1672 GATGTGAATGATGGCAAAAAGGAATCTCGTCAAGCTGTTGATTTTGATCTCTCAATCAGC 1731
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 GATGTGAATGATGGGATAAAGGAATCTCGTCAAGCTGTTGATTTTGATCTCTCAATCAGC 1716
Query 1732 AGTTCTAGTAAGTCTCTTGAGTTTGGTACGAGTACTCGGATGAGCAATGGTAAAGAGATA 1791
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1717 AGTTCTAGTAAGTCTCTCGAGTTTGGTACGAGTACTCGGATGAGCAATGGTAAAGAGATA 1776
Query 1792 GAAGTGATTGATTTGGATGATGATTCCCCTGAAGTGGTAAAGTCCAGCAATGATCCGGGA 1851
||||||||| |||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct 1777 GAAGTGATTAATTTGGATGATGAT-CAA--GAAGTGGTAAAGTCCAGCAATGATCCAGGA 1833
Query 1852 AGAAAGCAAGAGGCTGCTCCATATATGGGCATCGATGACGTCCCAGGCTACAATGAAGGA 1911
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 1834 AGAAAGCAAGAAGCTGCTCCATATATGGGCATCGATGACGTCCCAGACTACAATGAAAGA 1893
Query 1912 CTCATGATGGTAGAGTTTCTTGATTCCTTTGGAAACATTCCTCCAATAAACCAGGAGA-C 1970
|||||||||||||||| ||||||||||||| | | | || ||||||||||| || |
Sbjct 1894 CTCATGATGGTAGAGTATCTTGATTCCTTT--A--C-T-CC---AATAAACCAGG-GAAC 1943
Query 1971 CAATAGTGTTCCACAGAATAACAACGCTGTTAGCCTTCAAGACAGAGAGGTACTGAAAAC 2030
|| |||||| ||||||||||||||| | ||||||||||||||| | ||
Sbjct 1944 CAGTAGTGTCCCACAGAATAACAACACAGTTAGCCTTCAAGAC---------C-GA---- 1989
Query 2031 GTCACAGGGAGCTATTGGAAATGACCAAGTACCAAATAATACAGACGATGACTCGATCTT 2090
| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1990 G--A--GGGAGCTATTGGAAATGACCAAGTACCAAATAATACAGACGATGATTCGATCTT 2045
Query 2091 CATGTCACTGGGAGAAATACCATTGA 2116
||||||||| ||||||||||||||||
Sbjct 2046 CATGTCACTCGGAGAAATACCATTGA 2071
> AT4G26455.1 | Symbols: WIP1 | WPP domain interacting protein
1 | chr4:13365368-13367497 FORWARD LENGTH=1952
Length=1952
Score = 2109 bits (1142), Expect = 0.0
Identities = 1305/1384 (94%), Gaps = 10/1384 (1%)
Strand=Plus/Plus
Query 2118 tttttttGTGGAGTGTGTAATGGATTTAGAGAGTGAAAGCTCTGCGCTTGAGTCTGTTGA 2177
|||||||||||| || ||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 354 TTTTTTTGTGGA--GT-CAATGGATTTGGAGAGTGAAAGCTCTGCACTTGAGTCTGTTGA 410
Query 2178 TGATAATGGTTTGATTCAACAAAGTGCCAGCAACG-TCGCTGATGATGGTAGGAGTTTGG 2236
|||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct 411 TGATAATGTTTTGATTCAACAAAGTGCCAGCAACGTTTG-TGATGATGGTAGGAGTTTGG 469
Query 2237 ATAACGGGTCTTGCTCTGATGAGAGTGTCAAACTGGTTTCCACTTCTAAATCTGTTGAAA 2296
|||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||
Sbjct 470 ATAACGGGTCTTGCTCTGATGAGAGTGTGAAACTGCTTTCGACTTCTAATTCTGTTGAAC 529
Query 2297 TCGGTAAACCGATGAATTTTGATTCACCA-G-G-TGGTGGTGGTTCTTACACTCCGGTTT 2353
|||||||||| |||| ||||||||||||| | | |||||||||| |||| |||||||||
Sbjct 530 TCGGTAAACCTATGAGTTTTGATTCACCAGGTGATGGTGGTGGTGCTTATTCTCCGGTTT 589
Query 2354 TGAAAGGACAAGGCTTGAGAAAATGGAGGAGGATTAGGAGAGATCTTGTTAAGGACACGT 2413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 TGAAAGGACAAGGCTTGAGAAAATGGAGGAGGATTAGGAGAGATCTTGTTAAGGACACGT 649
Query 2414 CTGCCAATATTGAGAATAGTAAAGCTCTGAAGAGAGTGTTGTC-GGCTGTTGGTCATTCA 2472
|||| ||||| ||||||||||||||||||||||||| |||||| || ||||| |||||||
Sbjct 650 CTGCGAATATGGAGAATAGTAAAGCTCTGAAGAGAGGGTTGTCAGG-TGTTGCTCATTCA 708
Query 2473 CATGGTAAACAAATGCAGTTTCAGTCACCGGAAGTCGAACAAGAGAGTCAGGGATCTGTT 2532
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 709 CATGGTAAACAGATGCAGTTTCAGTCACCGGAAGTTGAACAAGAGAGTCAGGGATCTGTT 768
Query 2533 GGGTCTGTGAATATGTTGAAAAGTACCGGTGATGGTTTTGATATACTAGGGAGTACTGGT 2592
|||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||
Sbjct 769 GGGTCTGTTAATATGTTGAAAAGTAGCGGTGATGGTTTTGATATACTTGGGAGTAGTGGT 828
Query 2593 TATGATTCTAGGTTTGTGGCAGGGATTGGTTTTTCAGCTGGTATGGATTTAGAAATAGAT 2652
|| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 829 TACGATTCTAGGTTTGTGGCAGGGGTTGGTTTTTCAGCTGGTATGGATTTAGAGATAGAT 888
Query 2653 GATGATCGGAGTAGTAAGTCCTCGACGGCTGCAAGAGCTCCCAAGGTTATTAGGTATGAG 2712
|||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||
Sbjct 889 GATGATCGGAGTAGTAAGTCTTCCACGGTTGCAAGAGCTCCCAAGGTTATTAGGTATGAG 948
Query 2713 AAGCCAATGATTAGTTCAGGTCAGGGAGGAAAAATTCGTGTAGAGAATAGTAAGAAACAT 2772
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 949 AAGCCAATGATTAGTTCAGGTCAGGGAGGAAACATTCGTGTAGAGAATAGTAAGAAACAT 1008
Query 2773 AGAGGAGAAAGTGTCGATATCGACAAGGAAAACTCTTATTCCAGCTTGGAATCTGACTCA 2832
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 1009 AGAGGAGAAAGTGTCGATTTCGAGAAGGAAAACTCTTATTCCAGCTTGGAATCTGACTCA 1068
Query 2833 AGAAAGCAGAGTGGAAAAATGATGGACTACAATGGTGAAAATGGGGAAACGTCAATGAGA 2892
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 AGAAAGCAGAGTGGAAGAATGATGGACTACAATGGTGAAAATGGGGAAACGTCAATGAGA 1128
Query 2893 AGAGATGATGCGGGAGGAGAGGGAGGAGAGTCGATAAACACGAACAATCGTTATTCAGAG 2952
| |||||||||||||||||| || |||||||||||||||||| |||||||||| |||||
Sbjct 1129 AAAGATGATGCGGGAGGAGAAGGCGGAGAGTCGATAAACACGGACAATCGTTACTCAGAT 1188
Query 2953 GATCTGGATCCATTAACAGAGGCCATCAACGGTTTCTTGGCCTTGCAAGATGCTATTGAA 3012
|| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1189 GAAATGGATCCATTAACAGAGGCCATCAACGGTTTCTTGGCCTTGCAAGATGCTCTTGAA 1248
Query 3013 AAAGAGGTTCAGCAATTCCAGGAGATCGGGAATGAACCAATGCCACAACATCATGAACAA 3072
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1249 AAAGAGGTTCAGCAATTCCAGGAGATCGGGAATGAACCAATGCCACAGCATCATGAACAA 1308
Query 3073 GTCAGTGACGTAAGTTCACCTCACTCGGAGATTGTAGCCCTGGTAAACAATGTTGAACAA 3132
||||| || | || |||||||||| | ||||||||| |||||||||||||||||||||||
Sbjct 1309 GTCAGCGAAGCAAATTCACCTCACCCCGAGATTGTAACCCTGGTAAACAATGTTGAACAA 1368
Query 3133 CTGGAGAACATGCTAGAAGAAACAAGGTCCATGCTTGAGGTGAAAGAATCACACATCCGT 3192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 CTGGAGAACATGCTAGAAGAAACAAGGTCCATGCTTGAGGTGAAAGAATCACACATCCGT 1428
Query 3193 GAGCTTGAATCCACCACGAACCAAAACAAACACTCGTGGGGAGGAACAGAGACCGCAGTT 3252
|| |||||||||||||||||||||| |||||||||||||||||||||||||| | |||
Sbjct 1429 GACCTTGAATCCACCACGAACCAAAGCAAACACTCGTGGGGAGGAACAGAGATTGTGGTT 1488
Query 3253 GAAGATATCTTTCGGCAGAAGATTGAGGCTGAGATTGAATATCTGATTTATTCAAGATCT 3312
||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1489 GAAGACATCTTCCGGCAGAAGATTGAGGCCGAGATTGAATATCTGATATATTCAAGATCT 1548
Query 3313 ATCGATAACTTAGACAGTCAGATGAAGTTAATTGATGAACAAGAGTCGTTGGCAGAAGAG 3372
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1549 ATCGATAACTTAAACAGTCAGATGAAGTTAATTGATGAACAAGAGTCATTGGCAGAAGAG 1608
Query 3373 CAAAACCATGAGACGCTGAACAAGCTAGGAAGAGTACAAACGAAGGCTGCAAATTTAACA 3432
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1609 CAAACCCATGAGACGCTGAATAAGCTAGGAAGAGTACAAACGAAGGCTGCAAATTTTACA 1668
Query 3433 AACAGAGCTCAAGACCTGCAAAACGAGTGCATAGAAATCACCGGAACCATCAAGAAGAGA 3492
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1669 AACAGAGCTCAAGACCTGCAAAACGATTGCATAGAAATCACCGGGACCATCAAGAAGAGA 1728
Query 3493 GCAT 3496
||||
Sbjct 1729 GCAT 1732
> AT5G47818.1 | Symbols: | unknown pseudogene | chr5:19364137-19364679
REVERSE LENGTH=364
Length=364
Score = 385 bits (208), Expect = 2e-105
Identities = 254/276 (92%), Gaps = 4/276 (1%)
Strand=Plus/Plus
Query 2906 GAGGAGAGGGAGGAGAGTCGATAAACACGAAC-AATCGTTATTCAGAGGATCTGGATCCA 2964
||||||| ||||||||||||||||||||| || |||||||| || ||||| |||||| ||
Sbjct 91 GAGGAGAAGGAGGAGAGTCGATAAACACG-ACGAATCGTTACTCCGAGGAACTGGATTCA 149
Query 2965 TTAACAGAGGCCATCAACGGTTTCTTGGCCTTGCAAGATGCTATTGAAAAAGAGGTTCAG 3024
|||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 150 TTAACAGAAGCCATCGACGGTTTCTTGGCCTTGCAAGATGCTCTTGAAAAAGAGGTTCAG 209
Query 3025 CAATTCCAGGAGATCGGGAATGAACCAATGCCACAACATCATGAACAAGTCAGTGACGTA 3084
||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 210 TAATTCCAAGAGGTCGGGAATGAACCAATGCCACAACATCATGAACAAGTCAGCGACGCA 269
Query 3085 AGTTCACCTCA-CTCGGAGATTGTAGCCCTGGTAAACAATGTTGAACAACTGGAGAACAT 3143
||||||||||| | | ||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct 270 AGTTCACCTCACCAC-GAGATTGTAACCCTGTTAACCAATGTTGAACAACTGGAGAACAT 328
Query 3144 GCTAGAAGAAACAAGGTCCATGCTTGAGGTGAAAGA 3179
|||||||||||||||||| |||||||||||||||||
Sbjct 329 GCTAGAAGAAACAAGGTCTATGCTTGAGGTGAAAGA 364
Score = 135 bits (73), Expect = 2e-30
Identities = 93/102 (91%), Gaps = 3/102 (3%)
Strand=Plus/Plus
Query 2569 TTTGATATACTAGGGAGTACTGGTTATGATTCTAGGTTTGTGGCAGGGATTGGTTTTTCA 2628
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 1 TTTGATATACTAGGGAGTAGTGGTTATAATTCTAGGTTTGTGGCAGGGATTGGTTTTTCA 60
Query 2629 GCTGGTATGGATTTAGAAATAGATGATGATCGGAGTAGTAAG 2670
||||||||||||||||| | | ||||| ||| ||| || |||
Sbjct 61 GCTGGTATGGATTTAGAGA-A-ATGATAATCAGAGGAG-AAG 99
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 187774867649
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5