BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492220
Length=2345
Score E
Sequences producing significant alignments: (Bits) Value
AT4G25970.1 | Symbols: PSD3 | phosphatidylserine decarboxylase ... 3779 0.0
AT5G57190.1 | Symbols: PSD2 | phosphatidylserine decarboxylase ... 1807 0.0
> AT4G25970.1 | Symbols: PSD3 | phosphatidylserine decarboxylase
3 | chr4:13184114-13189435 FORWARD LENGTH=2330
Length=2330
Score = 3779 bits (2046), Expect = 0.0
Identities = 2255/2352 (96%), Gaps = 29/2352 (1%)
Strand=Plus/Plus
Query 1 TCGGTGACACAGGTATTTTG----CAAATAGAAA-GACTCCGGTCACTGCCGCTCACTGA 55
|||||||||||| ||||||| |||||| ||| || ||||||||||| ||||||||||
Sbjct 1 TCGGTGACACAGATATTTTGCTTCCAAATA-AAACGAGTCCGGTCACTGGCGCTCACTGA 59
Query 56 CTTCTTCTTCCTCCATCTCCGAATTTCCGATCCACAGGATTACCAAGCGCGTGAGGTCTA 115
|||| |||||||||||||||| | ||| || || ||| ||||||||||||| | |
Sbjct 60 CTTCGTCTTCCTCCATCTCCG-A--TCC-AT----TGGTTTAACAAGCGCGTGAGGGCCA 111
Query 116 GAGAGTTCGAGAACCATGGGAAACGGAAACTCCACGGAGGCGAAAGAGTCGCGCCGATCA 175
|| || |||||| |||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 112 GATAGACCGAGAATCATGGGAAACGGAAACTCAACGGAGACGAAAGAGTCGCGCCGATCA 171
Query 176 AAGATGCG-ACAGAAGATTCAGAACTTTCGCAGCCGCCGCCGTCTTAGTCGTCCAGGATC 234
|||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 172 AAGATGCGTA-AGAAGATTCAAAACTTTCGCAGCCGCCGCCGTCTTAGTCGTCCAGGATC 230
Query 235 CGGAAGCGTCTCCGGATTGGTTAGTCAGAGATCTGTTAGCGCAGATGATTTCGCCGGCAT 294
|||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 231 CGGAAGCGTCTCTGGATTGGCTAGTCAGAGATCTGTGAGCGCAGATGATTTCGCCGGCAT 290
Query 295 TGCTCTTCTCACTCTCATCGGCGCGGAGATGAAGTTCAAGGACAAGTGGCTCGCCTGTGT 354
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 TGCTCTTCTCACTCTTATCGGCGCGGAGATGAAGTTCAAGGACAAGTGGCTCGCCTGTGT 350
Query 355 TTCCTTCGGGGAACAAACTTTCCGTTCGCAGATTTCAGATTCCACAGAGAAGCCGATTTG 414
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 351 TTCCTTCGGGGAACAAACTTTCCGTTCGGAAATTTCAGATTCCACAGAGAAGCCGATTTG 410
Query 415 GAATTCGGAAAAGAAGCTTCTCCTGGAGAAAAATGGACCAAGTCTGGCTAGAATCTCTGT 474
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 GAACTCGGAAAAGAAGCTTCTCCTGGAGAAAAATGGACCAAGTCTGGCTAGAATCTCTGT 470
Query 475 ATTTGAGACCAATAGACTCTCGAAGAACAATATCGTTGGTTATTGTGAGCTTGATCTACT 534
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 471 ATTTGAGACCAATAGACTCTTGAAGAACAATATCGTTGGTTATTGTGAGCTTGATCTACT 530
Query 535 TGAATTCGTAGTGCAGGAACCTGACTCTGCTTGCAAATCATTTGACCTGTTAGACCCTGC 594
||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||
Sbjct 531 TGATTTCGTAGTACAGGAACCTGACTCTACTTGCAAGTCATTTGACCTGTTAGACCCGGC 590
Query 595 CTCATCTAATGTTGTTGGCAGCATGTTTGTCTCATGCTCCGTTGAGGATCCTGTTGAAAC 654
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 591 CTCATCTAACGTTGTTGGCAGCATGTTTGTTTCATGCTCCGTTGAGGATCCTGTTGAAAC 650
Query 655 CGAGACATGTTTCGCAAAGCGTATTTTGTCCATAGTGGACTATGACGAAGATGGAAAACT 714
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 651 CGAGACATGTTTCGCGAAGCGTATTTTGTCCATAGTGGATTATGACGAAGATGGAAAACT 710
Query 715 CTCATTCTCAGAGTTCTCTGATCTGGTGAATGCTTTTGGGAATATAGTGGCTGCTAACAA 774
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 711 CTCATTCTCAGAGTTCTCTGATCTGATGAATGCTTTTGGGAATGTAGTGGCTGCTAACAA 770
Query 775 GAAAGAGGAGTTGTTCAAAGCCGCTGACCTGAATGGGGATGGTGTTGTTACAATTGATGA 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 GAAAGAGGAGTTGTTCAAAGCCGCTGACCTGAATGGGGATGGTGTTGTTACAATTGATGA 830
Query 835 GTTGGCTGCACTTCTTGCCGTTCAACAGGAACAGGAGCCAATTATAAATAGTTGTCCGGT 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 GTTGGCTGCACTTCTTGCCGTTCAACAGGAACAGGAGCCAATTATAAATAGTTGTCCGGT 890
Query 895 TTGCGGTGAGGCTCTTCAACTTGACAAGCTCAATGCAATGATCCATATGACTCTCTGTTT 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 TTGCGGTGAGGCTCTTCAACTTGACAAGCTCAATGCAATGATCCATATGACTCTCTGTTT 950
Query 955 TGACGAAGGAACTGGTAATCAAACGATGACCGGAGGGTTCTTGACTGATAGGCAGGCTTC 1014
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 951 TGACGAAGGAACTGGTAATCAAA---TGACCGGAGGGTTCTTGACTGATAGGCAGGCTTC 1007
Query 1015 ATATGGATGGATGTTCAAACTAAGTGAATGGACTCATCTATCAACTTATGATGTTGGTTT 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1008 ATATGGATGGATGTTCAAACTAAGTGAATGGACTCATCTATCAACTTATGATGTTGGTTT 1067
Query 1075 GAATACTGGTTCAAGTGCTTCACATATTGTGGTGATTGATCGGAAGACTAAGAGGCTCGT 1134
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1068 GAATACTGGTTCAAGTGCTTCACATATTGTGGTGATTGATAGGAAGACTAAGAGGCTCGT 1127
Query 1135 GGAAGAGTTGATTGATTCAAAGATTGTTATGTCGATGAGAGCTATTTACCAGTCAAAAAT 1194
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1128 GGAAGAGTTGATTGATTCAAAGATTGTTATGTCTATGAGAGCTATTTACCAGTCAAAAAT 1187
Query 1195 CGGACTCCGGCTTATGGACCAAGGAGCAAAAGAGATTTTGCAGAACCTTTCTGAGAAACA 1254
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1188 AGGACTCCGGCTTATGGACCAAGGAGCAAAAGAGATTTTGCAGAACCTTTCTGAGAAACA 1247
Query 1255 GGGGAAGAAGATGAACACAGTTGAATCTGCCCAAAATATACCCAGCTTTCTCGAGTTTTT 1314
|||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1248 GGGGAAAAAAATGAACTCAGTTGAATCTGCCCAAAATATTCCCAGCTTTCTCGAGTTTTT 1307
Query 1315 CAAGGATCAAATAAACATGGCCGAAGTCAAGTATCCTCTGGACCATTTTAAGACGTTCAA 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 CAAGGATCAAATAAACATGGCCGAAGTCAAGTATCCTCTGGACCATTTTAAGACGTTCAA 1367
Query 1375 TGAATTCTTCGTACGGGAGTTAAAGCCTGGTGCAAGACCAATTGCGTGCATGGATCAGGA 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1368 TGAATTCTTCGTACGGGAGTTAAAGCCTGGTGCAAGACCAATTGCGTGCATGGATCAGGA 1427
Query 1435 TGATGTTGCTGTATCTGCTGCTGATTGTCGATTAATGGCGTTTCAATCGGTGGATGATAG 1494
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1428 TGATGTTGCTGTATCTGCTGCTGATTGTCGATTAATGGCATTTCAATCGGTTGATGATAG 1487
Query 1495 CACGCGGTTCTGGATCAAGGGCCGTAAGTTTTCAATCAAAGGTCTCCTTGGGAATGATGT 1554
||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1488 CACACGGTTCTGGATCAAGGGCCGTAAGTTTTCAATCAAAGGCCTCCTTGGAAATGATGT 1547
Query 1555 GCAGTCAGATGCTTTTATTGATGGATCTTTGGTGATATTCCGATTGGCTCCACAGGACTA 1614
|||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1548 GCAGTCGGATGCTTTCCTTGATGGATCTTTGGTGATATTCCGATTGGCGCCACAGGACTA 1607
Query 1615 TCATCGTTTTCATTCTCCTGTCTCTGGTGTCATTGAAAAGTTTGTCAATGTTTCTGGAAG 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1608 TCATCGTTTTCATTCTCCTGTCTCTGGTGTCATTGAAAAGTTTGTCAATGTTTCTGGAAG 1667
Query 1675 CTTATATACAGTTAATCCGATAGCTGTCAATAGCAAGTACTGTAATGTGTTCACTGAGAA 1734
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1668 CTTATATACGGTTAATCCGATTGCTGTCAATAGCAAGTACTGTAATGTGTTCACTGAGAA 1727
Query 1735 TAAACGGACAATCGTAATTATATCAACAGCAGAGTTTGGAAAGGTCGCATTTGTTGCGAT 1794
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1728 TAAACGGACCATCGTAATTATATCAACAGCAGAGTTTGGAAAGGTCGCATTTGTTGCGAT 1787
Query 1795 TGGAGCGACAATGGTTGGTAGTATCACCTTTGTTAGGCAAGAGGGAGACCATGTGAAGAA 1854
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1788 TGGAGCAACAATGGTTGGTAGTATCAGCTTTGTTAGGCAAGAGGGAGACCATGTGAAGAA 1847
Query 1855 AGGGGACGAGCTTGGTTACTTTTCATTTGGTGGAAGCACAGTTATAAGCGTCTTTGAAAA 1914
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1848 AGGGGACGAGCTTGGTTACTTTTCATTTGGTGGAAGCACAGTTATATGCGTCTTTGAAAA 1907
Query 1915 GGACTCGATTAAGATTGATGAGGATCTCTTAGCTAACAGTGCTAGGTCCTTGGAGACATT 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1908 GGACTCGATTAAGATTGATGAGGATCTCTTAGCTAACAGTGCTAGGTCCTTGGAGACATT 1967
Query 1975 AGTTACTGTTGGAATGCAACTAGGTGTCTCCTTTCCAAAGATAGAAAACTGTGTTA-TTG 2033
||||||||||||||||||||| |||||||||||||||||| | ||||||||||| | |||
Sbjct 1968 AGTTACTGTTGGAATGCAACTTGGTGTCTCCTTTCCAAAGCTGGAAAACTGTGT-ACTTG 2026
Query 2034 AACCCTGAACTGCTTCAAACTATGTGAGTTAGTACGAAACGACAGATGAttttctttggt 2093
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2027 AGCCCTGAACTGCTTCAAACTATGTGAGTTAGTACGAAACGACAGATGATTTTCTATGGT 2086
Query 2094 ttggtttggtttgatttgatttagttttctctttttATCAAGAAAGAACTCAATTCCTCT 2153
|||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 2087 TTGGTTTG-----ATTTGATTTAGTTTTCACTTTTCATCAAGAAAGAACTCAATTCCTCT 2141
Query 2154 CTGTTTGATACACAATGACTTTGCTCTGTATATATAAACACCAGTAATATGTCCTGGGCA 2213
|||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||
Sbjct 2142 CTGTTTAATACACAATGACTTTGCTCTGTATATATAAACACCAGTA-T--GTCCCGGGCA 2198
Query 2214 GTGATACTTGTTAATGTTTACGGTATTTCGCtttttttGTTGAGTGTTTTTGCTAGGTGA 2273
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2199 GTGATACTTGTTAATGTTTACGGTATTTCGCTTTTTTTGTTGAGTGTTTTTCCTAGGTGA 2258
Query 2274 CAATTTTACATGCAAATAAGGTTAAACACATGTCTGTCTCTATTCCTGTCTTAATGAAGA 2333
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2259 CAATTTTACATGCAAATAAGGTTAAACACATGTCTGTCTCTATTCCGGTCTTAATGAAGA 2318
Query 2334 GACTTTGTCTGT 2345
||||||||||||
Sbjct 2319 GACTTTGTCTGT 2330
> AT5G57190.1 | Symbols: PSD2 | phosphatidylserine decarboxylase
2 | chr5:23171531-23175364 REVERSE LENGTH=1908
Length=1908
Score = 1807 bits (978), Expect = 0.0
Identities = 1604/1903 (84%), Gaps = 56/1903 (3%)
Strand=Plus/Plus
Query 131 ATGGGAAACGGAAACTCCACGGAGGCGAAAGAGTCGCGCCGATCAAAGATGCGACAGAAG 190
||||||||||||||||| | |||||| || || ||| | || |||| | | ||||| |||
Sbjct 1 ATGGGAAACGGAAACTCAAGGGAGGCTAAGGAATCGAGACGGTCAAGGCTACGACATAAG 60
Query 191 ATTCAGAACTTTCGCAGCCGCCGCCGTCTTAGTCGTCCAGGATC-CGGAAGCGTC-TCCG 248
| || || ||||||| | ||| |||| | |||| | | || | ||| | || | |
Sbjct 61 CTACAAAAGTTTCGCATTCACCGTCGTCATCTTCGT--A-GTTCTC-GAAAC-TCGGCAG 115
Query 249 GATTGGTTAGT-CAGA-GATCTGTTAGCGCAGATGATTTCGCCGGCATTGCTCTTCTCAC 306
|| |||| | | || | || ||||| ||| || |||||| |||||||||| ||||||||
Sbjct 116 GAATGGTGA-TACA-ACGAACTGTTTCCGCCGAGGATTTCTCCGGCATTGCGCTTCTCAC 173
Query 307 TCTCATCGGCGCGGAGATGAAGTTCAAGGACAAGTGGCTCGCCTGTGTTTCCTTCGGGGA 366
|||||| |||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct 174 TCTCATTGGCGCGGAAATGAAGTTTAAGGACAAGTGGCTCGCTTGTGTTTCTTTCGGTGA 233
Query 367 ACAAACTTTCCGTTC-GCAGATTTCAGATTCCACAGAGAAGCCGATTTGGAATTCGGAAA 425
||| |||||| | | | | || |||||| | ||| ||||||| |||||||| || || |
Sbjct 234 ACAGACTTTCAGAACTG-AAATCTCAGATACTACACAGAAGCCAATTTGGAACTCAGAGA 292
Query 426 AGAAGCTTCTCCTGGAGAAAAATGGACCAAGTCTGGCTAGAATCTCTGTATTTGAGACCA 485
|||||||| | |||||||||||||||||||||| ||||| |||| |||||||||||||
Sbjct 293 AGAAGCTTTTGTTGGAGAAAAATGGACCAAGTCTTGCTAGGGTCTCAGTATTTGAGACCA 352
Query 486 ATAGACTCTCGAAGAACAATATCGTTGGTTATTGTGAGCTTGATCTACTT-GAATTCGTA 544
|||| | ||| |||||| ||| | |||||||||||||||||| || || || || |||
Sbjct 353 ATAGGGTAGCGAGGAACAAAATCATCGGTTATTGTGAGCTTGATATA-TTCGATTTTGTA 411
Query 545 GTGCAGGAACCTGACTCTG-CTTGCAAATCATTTGACCTGTTAGA-CCCTGCCTCATCTA 602
|||||||||||||| || | |||| || |||||| || ||||||| ||| | ||||| |
Sbjct 412 GTGCAGGAACCTGAGTC-GACTTGTAAGTCATTTAACTTGTTAGATCCC-ACATCATCCA 469
Query 603 ATGTTGTTGGCAGCATGTTT-GTCTCATGCTCCGTTGAGGATCCTGTTGAAACCGAGA-- 659
||||||||||| ||| ||| | || ||| | ||||||||||||||||||| ||||
Sbjct 470 ATGTTGTTGGCTCCAT-TTTCCTTTCTTGCGCTATTGAGGATCCTGTTGAAACTGAGAGG 528
Query 660 CATGTTTCGCAAAGCGTATTTTGTCCATAGTGGACTATGACGAAGATGGAAAACTCTCAT 719
| |||| ||||||||||| ||||||||||||||||| | ||||||||| ||||||| |
Sbjct 529 C-GGTTT-GCAAAGCGTATCTTGTCCATAGTGGACTACAATGAAGATGGACAACTCTCGT 586
Query 720 TCTCAGAGTTCTCTGATCTGGTGAATGCTTTTGGGAA-TATAGTGGCTGCTAACAAGAAA 778
| || |||||||||||||| | || |||||||| || | |||||||||| |||||||||
Sbjct 587 TTTCGGAGTTCTCTGATCTAATAAAGGCTTTTGGAAACT-TAGTGGCTGCGAACAAGAAA 645
Query 779 GAGGAGTTGTTCAAAGCCGCTGACCTGAATGGGGATGGTGTTGTTACAATTGATGAGTTG 838
||||||||||| ||||| ||||||||||||||||| |||||||| || ||||| |||||
Sbjct 646 GAGGAGTTGTTTAAAGCTGCTGACCTGAATGGGGACGGTGTTGTGACGATTGACGAGTTA 705
Query 839 GCTGCACTTCTTGC-CGTTCAACAGGAACAGGAGCCAATTATAAATAGTTGTCCGGTTTG 897
||||| |||||||| | ||||||| ||||| |||||||||||||| | ||||||||| ||
Sbjct 706 GCTGCGCTTCTTGCTC-TTCAACAAGAACAAGAGCCAATTATAAACAATTGTCCGGTGTG 764
Query 898 CGGTGAGGCTCTTCA--ACT-TGACAAGCTCAATGCAATGATCCATATGACTCTCTGTTT 954
|||||||||||||| || |||||||||||| || ||||| ||||||||||| |||||
Sbjct 765 TGGTGAGGCTCTTCAGGTCTCTGACAAGCTCAACGCGATGATTCATATGACTCTTTGTTT 824
Query 955 TGACGAAGGAACTGGTAATCAAACGATGACCGGAGGGTTCTTGACTGATAGGCAGGCTTC 1014
|||||||||||| ||||||||| ||||||||||||||| ||||||||||| || |||||
Sbjct 825 TGACGAAGGAACGGGTAATCAAGTGATGACCGGAGGGTTTTTGACTGATAGACAAGCTTC 884
Query 1015 ATATGGATGGATGTTCAAACTAAGTGAATGGACTCATCT-ATCAACTTATGATGTTGGTT 1073
|||||||||||||||||||||||||||||||| || || |||||||||||| |||||||
Sbjct 885 TTATGGATGGATGTTCAAACTAAGTGAATGGACACA-CTTATCAACTTATGACGTTGGTT 943
Query 1074 TGAATACTGGTTCAAGTGCTTCACATATTGTGGTGATTGATCGGAAGACTAAGAGGCTCG 1133
||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| || || |
Sbjct 944 TGAATACTGGTTCAAGTGCTTCATATATTGTGGTAATTGACCGGAAGAGTAAAAGACTTG 1003
Query 1134 TGGAAGAGTTGATTGATTCAAAGATTGTTATGTCGATGAGAGCTATTTACCAGTCAAAAA 1193
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 1004 TGGAAGAGTTGATTGATTCAAAGATTGTTCTGTCCATGAGAGCTATTTACCAGTCAAAAA 1063
Query 1194 TCGGACTCCGGCTTATGGACCAAGGAGCAAAAGAGATTTTGCAGA-ACCTTTCTGAGAAA 1252
| ||||| | |||||||| ||||| ||||| |||||| |||||| || ||||||||||
Sbjct 1064 TTGGACTAAGACTTATGGATCAAGGGGCAAAGGAGATTCTGCAGAGAC-TTTCTGAGAAG 1122
Query 1253 CAGGGGAAGAAGATGAACACAGTTGAATCTGCCCAAAATATACC-CAGCTTTCTCGAGTT 1311
||||||||||| |||| | |||||||||| || ||||| ||||| | |||||||||||||
Sbjct 1123 CAGGGGAAGAAAATGAGCTCAGTTGAATCCGCACAAAAAATACCAC-GCTTTCTCGAGTT 1181
Query 1312 -TTTCAAGGATCAAATAAACATGGCCGAAGTCAAGTATCCTCTGGACCATTTTAAGACGT 1370
||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||
Sbjct 1182 CTTT-AAGGATCAAATAAACATGGCTGAAGTCAAGTATCCTCTGCAGCATTTTAAGACGT 1240
Query 1371 TCAATGAATTCTTCGTACGGGAGTT-AAAGCCTGGTGCAAGACCAATTGCGTGCATGGAT 1429
||||||| ||||| | || ||||| ||| |||||||||||||||||||| |||||| |
Sbjct 1241 TCAATGAGTTCTTTATCCGAGAGTTGAAA-CCTGGTGCAAGACCAATTGCTTGCATGAAC 1299
Query 1430 CAGGA-TGATGTTGCTGTATCTGCTGCTGATTGTCGATTAATGGCGTTTCAATCGGTGGA 1488
| | | |||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||
Sbjct 1300 C-GCAATGATGTTGCTGTATGTGCCGCTGATTGTCGATTAATGGCATTTCAGTCGGTGGA 1358
Query 1489 TGATAGCACGCGG-TTCTGGATCAAGGGCCGTAAGTTTTCAATCAA-AGGTCTCCTTGGG 1546
||||| || | | ||||||||||||||| ||||||||||| || ||| |||||||||
Sbjct 1359 AGATAGTAC-CAGATTCTGGATCAAGGGCAAAAAGTTTTCAAT-AAGAGGCCTCCTTGGG 1416
Query 1547 AATGA-TGTGCAGTC-AGATGCTTTTATTGATGGATCTTTGGTGATATTCCGATTGGCTC 1604
|| || |||| | || | |||| || |||||||||||||||| |||||| || | || |
Sbjct 1417 AA-GAATGTGAA-TCCAAATGCCTTCCTTGATGGATCTTTGGTTATATTCAGACTAGCAC 1474
Query 1605 CACAGGACTATCATCGTTTTCAT-TCTCCTGTCTCTGGTGTCATTGAAAAGTTTGTCAAT 1663
||||||| |||||||| |||||| || ||||||||||| ||||||||| ||||||| ||
Sbjct 1475 CACAGGATTATCATCGGTTTCATGTC-CCTGTCTCTGGAGTCATTGAACAGTTTGTGGAT 1533
Query 1664 GTTTCTGGAAGCTTATATACAGTTAATCCGATAGCTGTCAATAGCAAGTACTGTAATGTG 1723
||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct 1534 GTTTCTGGAAGCTTATATACAGTTAATCCAATTGCGGTCAATAGCAAGTACTGTAATGTA 1593
Query 1724 TTCACTGAGAATAAACGGACAATCGTAATTATATCAACAGCAGAGTTTGGAAAGGTCGCA 1783
||||| || |||||||| || | | |||||||||||||||||| ||||||||||| ||
Sbjct 1594 TTCACGGAAAATAAACGAACCGTTGCAATTATATCAACAGCAGAATTTGGAAAGGTTGCT 1653
Query 1784 TTTGTTGCGATTGGAGCGACAATGGTTGGTAGTATCACCTTTGTTAGGCAAG-AGGGAGA 1842
|||||||| || || || |||||||||||||| || | |||||||| ||| | |||||
Sbjct 1654 TTTGTTGCAATCGGTGCAACAATGGTTGGTAGCATAAATTTTGTTAGA-AAGGAAGGAGA 1712
Query 1843 CCATGTGAAGAAAGGGGACGAGCTTGGTTACTTTTCATTTGGTGGAAGCACAGTTATAAG 1902
|||||||||||||| || || |||||||| ||||| ||||||||||||||||||||| |
Sbjct 1713 GCATGTGAAGAAAGGAGATGAACTTGGTTATTTTTCGTTTGGTGGAAGCACAGTTATATG 1772
Query 1903 CGTCTTTGAAAAGGACTCGATTAAGATTGATGAGGATCTCTTAGCTAACAGTGCTAGGTC 1962
||||||||||||||| |||| ||| ||| | |||||||| | |||||||| ||||||
Sbjct 1773 TGTCTTTGAAAAGGACGCGATCGGGATCGATAATGATCTCTTGGTTAACAGTGGTAGGTC 1832
Query 1963 CTTGGAGACATTAGTTACTGTTGGAATGCAACTAGGTGTCTCC 2005
|| ||||||||||| | ||||||||||||| |||||||||||
Sbjct 1833 TTTAGAGACATTAGTGAGTGTTGGAATGCAATTAGGTGTCTCC 1875
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116415063855
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5