BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492255
Length=1432
Score E
Sequences producing significant alignments: (Bits) Value
AT4G25692.1 | Symbols: CPuORF13 | conserved peptide upstream op... 1491 0.0
AT4G25690.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1491 0.0
AT4G25672.1 | Symbols: CPuORF12 | conserved peptide upstream op... 926 0.0
AT4G25670.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 926 0.0
> AT4G25692.1 | Symbols: CPuORF13 | conserved peptide upstream
open reading frame 13 | chr4:13090209-13091797 REVERSE LENGTH=1589
Length=1589
Score = 1491 bits (807), Expect = 0.0
Identities = 920/975 (94%), Gaps = 6/975 (1%)
Strand=Plus/Plus
Query 426 GGCTTCTGTGTTTCTCCTTTGCAACTTCTAAAAGCTAATCAAGTAATCGTCAATGCAGAA 485
||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 507 GGCTTATCTGTTTCTCCTTTGCAACTACTATAAGCTAATCAAGTAATCGTCAATGCAGAA 566
Query 486 AATGGGAGAGTCTACTGGGTTTGGGAAAGGAGGACGAATGATTCCAAATCATAAGTCTGC 545
||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 567 AATGGGAGAGTCTACGGGGTGTGGGAAAGGAGGACTAATGATTCCAAATCATAAGTCTGC 626
Query 546 AAATTCCTATAACCTCTCCCTTCAGTTGTCTCCTGTTGACTCTGTTTGGGATTGTATTGT 605
||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||
Sbjct 627 TAATTCTTATAACCTCTCCCTTGAGTTGTCTCTTGTTGACTCTGTTTGGGATTGTAATGT 686
Query 606 TCGGACCATGAGGTATTCCTATATACCTGAGTGGTTGTAGTCTTTGAAATCATCTAAGAC 665
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 687 TCGGACCATGAGGTATTCCTATATACCTGAGTGGTTGTAGTCTTTGAAATCCTCTTAGAC 746
Query 666 AACGAGTTTTAGTGCATTTTAC-TTAGTTAGAATTATAGAGTTATACCAAGCAATAATGG 724
|||||| ||||||||||||||| |||||| |||| | ||||||||| |||||||||||||
Sbjct 747 AACGAG-TTTAGTGCATTTTACTTTAGTTGGAATCAAAGAGTTATAGCAAGCAATAATGG 805
Query 725 ATCACACGGTGTGCAAGCAAGTTGTTCAGCCAGTTACTAGGAAAGTGAAGAAGCATGGTA 784
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 ATCACACGTTGTGCAAGCAAGTTGTTCAGCCAGTTACTAGGAAAGTGAAGAAGCATGGTA 865
Query 785 AAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGTTTGGAGAAAGCTC 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 866 AAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGTTTGGAGAAAGCTC 925
Query 845 TTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAACAGAAGAGATTGGAAG 904
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 926 TTGCTACTTCTGCAGCCATTCGGGCTGAGCTTGAAAAGAAGAAGCAGAAGAGATTGGAAG 985
Query 905 AACAACAGAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTCGCTCTGCACGTCC 964
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 986 AACAACAAAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTCGCTCTGCACGTCC 1045
Query 965 TACTGGGCGAAGATTCTGATGATTCATCTCGGGCCATGCTTGGTGAAGAAAAGGGTTTCA 1024
||||||||||||||||||||||||||||||| | || | |||| ||||||| |||||||
Sbjct 1046 TACTGGGCGAAGATTCTGATGATTCATCTCGAGTCAAGTTTGGCGAAGAAACGGGTTTCG 1105
Query 1025 CAATGGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCAGAGTTGTGCTAGCT 1084
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1106 GAATGGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCAAAGTTGTGCTAGCT 1165
Query 1085 ATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGGAGATAGTAATTGGT 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1166 ATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGGAGATAGTAACTGGT 1225
Query 1145 CAGTGTCATATAAGCCATTCATGAAGGATGTTTGGGATAGCAACATGGTAATATCTGCGG 1204
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |
Sbjct 1226 CAGTGTCATATAAGCCATTCATGAAGGATGTCTGGGATAACAACATGGTAATATCTGCAG 1285
Query 1205 ATTTGATTGCTGCTCAGGCTGTTTCGTCACTACAGATATCTGAGGACGCTGATAGGAACG 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1286 ATTTGATTGCTGCTCAGGCTGTTTCGTCACTACAGATATCTGAGGACGCTGATAGGAACG 1345
Query 1265 CGTT-TGTCTTCGAAACAATGTTCCAGGGATGACAAAAGCCGTGGTTCCAAATTTGGCTG 1323
| || ||||||||| || |||||| ||||||||||||||| | || ||||| |||||||
Sbjct 1346 C-TTATGTCTTCGAGACGATGTTCGGGGGATGACAAAAGCCATCGTGCCAAACTTGGCTG 1404
Query 1324 CAGAAAGAAGTGTTTGCTATTAGAAGAGTTGCAGCTTTATTCTCTT-TTCTAGAAGCCCT 1382
|||||| ||||||||||||| || |||||||||| ||| |||| || |||||||| ||||
Sbjct 1405 CAGAAACAAGTGTTTGCTATGAGTAGAGTTGCAGTTTTTTTCT-TTATTCTAGAACCCCT 1463
Query 1383 TTTGGTGTGAAAATT 1397
|||||||||||||||
Sbjct 1464 TTTGGTGTGAAAATT 1478
Score = 514 bits (278), Expect = 9e-145
Identities = 388/437 (89%), Gaps = 24/437 (5%)
Strand=Plus/Plus
Query 2 TCCAGAAAGCTACGTTtctctctctctctctGTATTATCCGATTAAA--TTAGAGTAGTT 59
||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct 1 TCCAGAAAGCTACGTTTCTCTTTCTCTCTTTGTATTATCCGATTAAATTTTAGAGTAGTT 60
Query 60 CTTTGAGGCAGCTGCTTCTATGCCATTTTCTAAAGGTTTGGATCCAATTTCATCTTCATC 119
||||||| |||||||||||||||||||||||| |||||||||||| | | || ||
Sbjct 61 CTTTGAGTCAGCTGCTTCTATGCCATTTTCTAGAGGTTTGGATCC-A----A--TT--TC 111
Query 120 ATCATCTTGTTGATCCGTTTATCTTCAATTTCCATAGA----TT-T--TTGAATTGACTT 172
|||||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct 112 ATCATCTTGTTGATCCGTTTATCTTCAATTTCCATAGATTTTTTCTAATTGAATTGACTT 171
Query 173 CTTTCGAGAAAAGTTTTTTCGATTAGCTTCATTTGTTCCTCAGATTTAATGGTTAATTAT 232
||||||||||||| |||||||| || ||||||||||| |||||||||||| ||||||||
Sbjct 172 CTTTCGAGAAAAG-TTTTTCGAGCAGTTTCATTTGTTCATCAGATTTAATGCTTAATTAT 230
Query 233 GGGTTTTTGAGGCAGATCTTGTCTCTGTCGATTGATTGCTTCTAGGCTTGCACTTCATTG 292
|||||| |||||||||||| ||| || ||||||||||||||||| | ||||| | |||||
Sbjct 231 GGGTTTCTGAGGCAGATCTGGTCACTCTCGATTGATTGCTTCTA-GTTTGCA-TCCATTG 288
Query 293 AAATTATCAGGCTTTAGCTTGTTTAATGTATCTTCTATCTTGCCTTGTTGTTGACTGTTG 352
|||| ||||||| ||||||||||| |||||||||||||||| || |||||||||||||
Sbjct 289 AAATGATCAGGCATTAGCTTGTTTGTTGTATCTTCTATCTTGTGTTATTGTTGACTGTTG 348
Query 353 AAATCGTTA---GATTTATGTTTGACCACTTTCTTTGGACTTGGTGTCTTTTTAAGTACC 409
||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 349 AAATCGTTAGTTGATTTATGTTTGACCACTTTCTTTGGACTTGGTGTCTTTTTATGTTCC 408
Query 410 TTGAATAAAGTGGCATG 426
||||||||||||| |||
Sbjct 409 TTGAATAAAGTGGAATG 425
> AT4G25690.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G25670.2);
Has 73 Blast hits to 60 proteins in 13 species: Archae - 0;
Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 67; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:13090209-13091798
REVERSE LENGTH=1590
Length=1590
Score = 1491 bits (807), Expect = 0.0
Identities = 920/975 (94%), Gaps = 6/975 (1%)
Strand=Plus/Plus
Query 426 GGCTTCTGTGTTTCTCCTTTGCAACTTCTAAAAGCTAATCAAGTAATCGTCAATGCAGAA 485
||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 508 GGCTTATCTGTTTCTCCTTTGCAACTACTATAAGCTAATCAAGTAATCGTCAATGCAGAA 567
Query 486 AATGGGAGAGTCTACTGGGTTTGGGAAAGGAGGACGAATGATTCCAAATCATAAGTCTGC 545
||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 568 AATGGGAGAGTCTACGGGGTGTGGGAAAGGAGGACTAATGATTCCAAATCATAAGTCTGC 627
Query 546 AAATTCCTATAACCTCTCCCTTCAGTTGTCTCCTGTTGACTCTGTTTGGGATTGTATTGT 605
||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||
Sbjct 628 TAATTCTTATAACCTCTCCCTTGAGTTGTCTCTTGTTGACTCTGTTTGGGATTGTAATGT 687
Query 606 TCGGACCATGAGGTATTCCTATATACCTGAGTGGTTGTAGTCTTTGAAATCATCTAAGAC 665
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 688 TCGGACCATGAGGTATTCCTATATACCTGAGTGGTTGTAGTCTTTGAAATCCTCTTAGAC 747
Query 666 AACGAGTTTTAGTGCATTTTAC-TTAGTTAGAATTATAGAGTTATACCAAGCAATAATGG 724
|||||| ||||||||||||||| |||||| |||| | ||||||||| |||||||||||||
Sbjct 748 AACGAG-TTTAGTGCATTTTACTTTAGTTGGAATCAAAGAGTTATAGCAAGCAATAATGG 806
Query 725 ATCACACGGTGTGCAAGCAAGTTGTTCAGCCAGTTACTAGGAAAGTGAAGAAGCATGGTA 784
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 ATCACACGTTGTGCAAGCAAGTTGTTCAGCCAGTTACTAGGAAAGTGAAGAAGCATGGTA 866
Query 785 AAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGTTTGGAGAAAGCTC 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 AAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGTTTGGAGAAAGCTC 926
Query 845 TTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAACAGAAGAGATTGGAAG 904
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 927 TTGCTACTTCTGCAGCCATTCGGGCTGAGCTTGAAAAGAAGAAGCAGAAGAGATTGGAAG 986
Query 905 AACAACAGAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTCGCTCTGCACGTCC 964
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 AACAACAAAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTCGCTCTGCACGTCC 1046
Query 965 TACTGGGCGAAGATTCTGATGATTCATCTCGGGCCATGCTTGGTGAAGAAAAGGGTTTCA 1024
||||||||||||||||||||||||||||||| | || | |||| ||||||| |||||||
Sbjct 1047 TACTGGGCGAAGATTCTGATGATTCATCTCGAGTCAAGTTTGGCGAAGAAACGGGTTTCG 1106
Query 1025 CAATGGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCAGAGTTGTGCTAGCT 1084
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1107 GAATGGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCAAAGTTGTGCTAGCT 1166
Query 1085 ATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGGAGATAGTAATTGGT 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1167 ATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGGAGATAGTAACTGGT 1226
Query 1145 CAGTGTCATATAAGCCATTCATGAAGGATGTTTGGGATAGCAACATGGTAATATCTGCGG 1204
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |
Sbjct 1227 CAGTGTCATATAAGCCATTCATGAAGGATGTCTGGGATAACAACATGGTAATATCTGCAG 1286
Query 1205 ATTTGATTGCTGCTCAGGCTGTTTCGTCACTACAGATATCTGAGGACGCTGATAGGAACG 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1287 ATTTGATTGCTGCTCAGGCTGTTTCGTCACTACAGATATCTGAGGACGCTGATAGGAACG 1346
Query 1265 CGTT-TGTCTTCGAAACAATGTTCCAGGGATGACAAAAGCCGTGGTTCCAAATTTGGCTG 1323
| || ||||||||| || |||||| ||||||||||||||| | || ||||| |||||||
Sbjct 1347 C-TTATGTCTTCGAGACGATGTTCGGGGGATGACAAAAGCCATCGTGCCAAACTTGGCTG 1405
Query 1324 CAGAAAGAAGTGTTTGCTATTAGAAGAGTTGCAGCTTTATTCTCTT-TTCTAGAAGCCCT 1382
|||||| ||||||||||||| || |||||||||| ||| |||| || |||||||| ||||
Sbjct 1406 CAGAAACAAGTGTTTGCTATGAGTAGAGTTGCAGTTTTTTTCT-TTATTCTAGAACCCCT 1464
Query 1383 TTTGGTGTGAAAATT 1397
|||||||||||||||
Sbjct 1465 TTTGGTGTGAAAATT 1479
Score = 516 bits (279), Expect = 3e-145
Identities = 389/438 (89%), Gaps = 24/438 (5%)
Strand=Plus/Plus
Query 1 ATCCAGAAAGCTACGTTtctctctctctctctGTATTATCCGATTAAA--TTAGAGTAGT 58
|||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct 1 ATCCAGAAAGCTACGTTTCTCTTTCTCTCTTTGTATTATCCGATTAAATTTTAGAGTAGT 60
Query 59 TCTTTGAGGCAGCTGCTTCTATGCCATTTTCTAAAGGTTTGGATCCAATTTCATCTTCAT 118
|||||||| |||||||||||||||||||||||| |||||||||||| | | || |
Sbjct 61 TCTTTGAGTCAGCTGCTTCTATGCCATTTTCTAGAGGTTTGGATCC-A----A--TT--T 111
Query 119 CATCATCTTGTTGATCCGTTTATCTTCAATTTCCATAGA----TT-T--TTGAATTGACT 171
||||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct 112 CATCATCTTGTTGATCCGTTTATCTTCAATTTCCATAGATTTTTTCTAATTGAATTGACT 171
Query 172 TCTTTCGAGAAAAGTTTTTTCGATTAGCTTCATTTGTTCCTCAGATTTAATGGTTAATTA 231
|||||||||||||| |||||||| || ||||||||||| |||||||||||| |||||||
Sbjct 172 TCTTTCGAGAAAAG-TTTTTCGAGCAGTTTCATTTGTTCATCAGATTTAATGCTTAATTA 230
Query 232 TGGGTTTTTGAGGCAGATCTTGTCTCTGTCGATTGATTGCTTCTAGGCTTGCACTTCATT 291
||||||| |||||||||||| ||| || ||||||||||||||||| | ||||| | ||||
Sbjct 231 TGGGTTTCTGAGGCAGATCTGGTCACTCTCGATTGATTGCTTCTA-GTTTGCA-TCCATT 288
Query 292 GAAATTATCAGGCTTTAGCTTGTTTAATGTATCTTCTATCTTGCCTTGTTGTTGACTGTT 351
||||| ||||||| ||||||||||| |||||||||||||||| || ||||||||||||
Sbjct 289 GAAATGATCAGGCATTAGCTTGTTTGTTGTATCTTCTATCTTGTGTTATTGTTGACTGTT 348
Query 352 GAAATCGTTA---GATTTATGTTTGACCACTTTCTTTGGACTTGGTGTCTTTTTAAGTAC 408
|||||||||| |||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 349 GAAATCGTTAGTTGATTTATGTTTGACCACTTTCTTTGGACTTGGTGTCTTTTTATGTTC 408
Query 409 CTTGAATAAAGTGGCATG 426
|||||||||||||| |||
Sbjct 409 CTTGAATAAAGTGGAATG 426
> AT4G25672.1 | Symbols: CPuORF12 | conserved peptide upstream
open reading frame 12 | chr4:13085218-13087090 REVERSE LENGTH=1213
Length=1213
Score = 926 bits (501), Expect = 0.0
Identities = 725/828 (88%), Gaps = 35/828 (4%)
Strand=Plus/Plus
Query 482 AGAAAATGGGAGAGTCTACTGGGTTTGGGAAAGGAGGACGAATGATTCCAAATCATAAGT 541
|||||||||| ||||||| |||| ||||| | |||||||||||| | || ||||||
Sbjct 199 AGAAAATGGGCGAGTCTAAGGGGTGCGGGAATGTTGGACGAATGATTTCGAAGAATAAGT 258
Query 542 CTGCAAATTCCTATAACCTCTCCCTTCAGTTGTCTCCTGTTGACTCTGTT-TGGGATTGT 600
|||| ||||| ||||||||||| ||||||||||||||||||| ||| || |||||||||
Sbjct 259 CTGCGAATTCTTATAACCTCTCTCTTCAGTTGTCTCCTGTTGTTTCT-TTCTGGGATTGT 317
Query 601 ATTGTTCGGACCATGAGGTATTCCTATATACCTGAGTGGTTGTAG-TCTTTGAAATCATC 659
||||| || ||||||||||||||||||||||| |||||| ||||| || |||| || ||
Sbjct 318 ATTGTCCGCACCATGAGGTATTCCTATATACCAGAGTGGGTGTAGTTC-TTGAGTTCCTC 376
Query 660 T--AAGA-CAACGAGTTTTAGTGCA-TTTTACTTAGTTAG-AATTATAGAGTTATACCAA 714
| || | || |||| ||||||||| |||| |||||||| |||| || || | |||
Sbjct 377 TACAACATCATCGAG-TTTAGTGCAGTTTT--TTAGTTAGAAATT-TATAG---T--CAA 427
Query 715 GCAATAATGGATCACACGGTGTGCAAGCAAGTTGTTCAGCCAGTTACTAGGAAA--G-TG 771
|||||||||||||||||||||||||||||| ||||||||||| ||||||| | |
Sbjct 428 GCAATAATGGATCACACGGTGTGCAAGCAA---GTTCAGCCAGTCGTTAGGAAAGCGAAG 484
Query 772 AAGAAGCATGGTAAAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGT 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 485 AAGAAGCATGGTAAAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGT 544
Query 832 TTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAACAG 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 545 TTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAGCAG 604
Query 892 AAGAGATTGGAAGAACAACAGAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTC 951
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 605 AAGAGATTGGAAGAACAACAAAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTT 664
Query 952 GCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGGGCCATGCTTGGTGAA 1011
|||||||||||||||||||||||||||||||||||||||||||| | || | ||||||||
Sbjct 665 GCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGAGTCAAGTTTGGTGAA 724
Query 1012 GAAAAGGGTTTCACAATGGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCAG 1071
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 725 GAAAAGGGTTTCACAATGGATCTGTTTAGAGATGAAAGAACTAACTACGTTCCTCGCCAA 784
Query 1072 AGTTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGGA 1131
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 785 AGCTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGCTATGGACTAGGA 844
Query 1132 GATAGTAATTGGTCAGTGTCATATAAGCCATTCATGAAGGATGTTTGGGATAGCAACATG 1191
|||||||| ||||| | ||| | | | | | | || || |||||||| |||||||
Sbjct 845 GATAGTAACTGGTC-GC--CAT-TCA-CGAGG-AGG--GG-TGCTTGGGATAACAACATG 895
Query 1192 GTAATATCTGCGGATTTGATTGCTGCTCAGGCTGTTTCGTCACTACAGATATCTGAGGAC 1251
| |||||| || ||||||||||||||||||||||| ||| | |||||||||||||| |
Sbjct 896 GGAATATCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATATCTGAAAAT 955
Query 1252 GCTGATAGGAACGCGTTTGTCTTCGAAACA-ATGTTCCAGGGATGACA 1298
|||||| ||||||| ||||| ||| || ||||||| |||||||||
Sbjct 956 GCTGATGGGAACGCCTTTGTGTTC-AATGGGATGTTCCGGGGATGACA 1002
> AT4G25670.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G25690.2);
Has 30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr4:13085218-13087090 REVERSE LENGTH=1213
Length=1213
Score = 926 bits (501), Expect = 0.0
Identities = 725/828 (88%), Gaps = 35/828 (4%)
Strand=Plus/Plus
Query 482 AGAAAATGGGAGAGTCTACTGGGTTTGGGAAAGGAGGACGAATGATTCCAAATCATAAGT 541
|||||||||| ||||||| |||| ||||| | |||||||||||| | || ||||||
Sbjct 199 AGAAAATGGGCGAGTCTAAGGGGTGCGGGAATGTTGGACGAATGATTTCGAAGAATAAGT 258
Query 542 CTGCAAATTCCTATAACCTCTCCCTTCAGTTGTCTCCTGTTGACTCTGTT-TGGGATTGT 600
|||| ||||| ||||||||||| ||||||||||||||||||| ||| || |||||||||
Sbjct 259 CTGCGAATTCTTATAACCTCTCTCTTCAGTTGTCTCCTGTTGTTTCT-TTCTGGGATTGT 317
Query 601 ATTGTTCGGACCATGAGGTATTCCTATATACCTGAGTGGTTGTAG-TCTTTGAAATCATC 659
||||| || ||||||||||||||||||||||| |||||| ||||| || |||| || ||
Sbjct 318 ATTGTCCGCACCATGAGGTATTCCTATATACCAGAGTGGGTGTAGTTC-TTGAGTTCCTC 376
Query 660 T--AAGA-CAACGAGTTTTAGTGCA-TTTTACTTAGTTAG-AATTATAGAGTTATACCAA 714
| || | || |||| ||||||||| |||| |||||||| |||| || || | |||
Sbjct 377 TACAACATCATCGAG-TTTAGTGCAGTTTT--TTAGTTAGAAATT-TATAG---T--CAA 427
Query 715 GCAATAATGGATCACACGGTGTGCAAGCAAGTTGTTCAGCCAGTTACTAGGAAA--G-TG 771
|||||||||||||||||||||||||||||| ||||||||||| ||||||| | |
Sbjct 428 GCAATAATGGATCACACGGTGTGCAAGCAA---GTTCAGCCAGTCGTTAGGAAAGCGAAG 484
Query 772 AAGAAGCATGGTAAAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGT 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 485 AAGAAGCATGGTAAAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGT 544
Query 832 TTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAACAG 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 545 TTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAGCAG 604
Query 892 AAGAGATTGGAAGAACAACAGAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTC 951
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 605 AAGAGATTGGAAGAACAACAAAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTT 664
Query 952 GCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGGGCCATGCTTGGTGAA 1011
|||||||||||||||||||||||||||||||||||||||||||| | || | ||||||||
Sbjct 665 GCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGAGTCAAGTTTGGTGAA 724
Query 1012 GAAAAGGGTTTCACAATGGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCAG 1071
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 725 GAAAAGGGTTTCACAATGGATCTGTTTAGAGATGAAAGAACTAACTACGTTCCTCGCCAA 784
Query 1072 AGTTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGGA 1131
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 785 AGCTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGCTATGGACTAGGA 844
Query 1132 GATAGTAATTGGTCAGTGTCATATAAGCCATTCATGAAGGATGTTTGGGATAGCAACATG 1191
|||||||| ||||| | ||| | | | | | | || || |||||||| |||||||
Sbjct 845 GATAGTAACTGGTC-GC--CAT-TCA-CGAGG-AGG--GG-TGCTTGGGATAACAACATG 895
Query 1192 GTAATATCTGCGGATTTGATTGCTGCTCAGGCTGTTTCGTCACTACAGATATCTGAGGAC 1251
| |||||| || ||||||||||||||||||||||| ||| | |||||||||||||| |
Sbjct 896 GGAATATCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATATCTGAAAAT 955
Query 1252 GCTGATAGGAACGCGTTTGTCTTCGAAACA-ATGTTCCAGGGATGACA 1298
|||||| ||||||| ||||| ||| || ||||||| |||||||||
Sbjct 956 GCTGATGGGAACGCCTTTGTGTTC-AATGGGATGTTCCGGGGATGACA 1002
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70581966270
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5