BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492259
Length=1201
Score E
Sequences producing significant alignments: (Bits) Value
AT4G25672.1 | Symbols: CPuORF12 | conserved peptide upstream op... 1805 0.0
AT4G25670.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1805 0.0
AT4G25692.1 | Symbols: CPuORF13 | conserved peptide upstream op... 893 0.0
AT4G25690.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 893 0.0
> AT4G25672.1 | Symbols: CPuORF12 | conserved peptide upstream
open reading frame 12 | chr4:13085218-13087090 REVERSE LENGTH=1213
Length=1213
Score = 1805 bits (977), Expect = 0.0
Identities = 1138/1212 (94%), Gaps = 25/1212 (2%)
Strand=Plus/Plus
Query 1 TCCTTCTATTATCCTCCCTCTCGTCTTCTTCTTCGTCT-Ct-tttttttAATTATCTCTC 58
|||||||||||||||| ||||| || |||||||||||| || || |||| |||||||||
Sbjct 13 TCCTTCTATTATCCTCTCTCTC-TCGTCTTCTTCGTCTGCTCTTCTTTT--TTATCTCTC 69
Query 59 GAAATTCCTCTTTCTCTTCTTCGTCTGCATCAAACCAGCAACTTTACTTCTGTATTTTTG 118
||||||||||| ||| ||| || ||||||||||| ||||||||||||||||| ||||||
Sbjct 70 GAAATTCCTCTCTCT-TTC-TC-TCTGCATCAAAACAGCAACTTTACTTCTGCGTTTTTG 126
Query 119 TTtctctctctct-ctctctctATTAATTTGAAGGAGTTCTTTGAAAGGCAGCTGCTTCT 177
||| ||||||| | | || | |||||||| ||||||||||||| |||||||||||||||
Sbjct 127 TTTATCTCTCTGTATTATC-CGATTAATTTAAAGGAGTTCTTTG-AAGGCAGCTGCTTCT 184
Query 178 ATGCCATATTGCAGAGAAAATGGGCGAGTCTAAGGGGTGCGGGAATGTTGGACGAATGAT 237
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 ATGCCATATTGCCGAGAAAATGGGCGAGTCTAAGGGGTGCGGGAATGTTGGACGAATGAT 244
Query 238 TCCAAAGAATAAGTCTGCTAACTCTTATAACGTCTCTCTTCGGTTGTCGCCTGTTGTTTC 297
| | |||||||||||||| || ||||||||| ||||||||| |||||| |||||||||||
Sbjct 245 TTCGAAGAATAAGTCTGCGAATTCTTATAACCTCTCTCTTCAGTTGTCTCCTGTTGTTTC 304
Query 298 TTTTTGGGATTGTATTGTCCGCACCATGAGGTATTCCTATATACCAGAGTGGGTGTAGTT 357
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 305 TTTCTGGGATTGTATTGTCCGCACCATGAGGTATTCCTATATACCAGAGTGGGTGTAGTT 364
Query 358 CTTGAGTTACTCTACGACATCATCGAGTTTAGTGCAGTTATTTTAGTTAG-AA-TTATAG 415
|||||||| |||||| ||||||||||||||||||||||| |||||||||| || ||||||
Sbjct 365 CTTGAGTTCCTCTACAACATCATCGAGTTTAGTGCAGTT-TTTTAGTTAGAAATTTATAG 423
Query 416 TCAAGCAATAATGGATCACACGGTGTGCAAGCAAGTTCAGCCAGTCGTTAGGAAAGC-AA 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 424 TCAAGCAATAATGGATCACACGGTGTGCAAGCAAGTTCAGCCAGTCGTTAGGAAAGCGAA 483
Query 475 GGAAGAAACATGGTAATGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGAC 534
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 -GAAGAAGCATGGTAAAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGAC 542
Query 535 GTTTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAGC 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 GTTTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAGC 602
Query 595 AGAAGAGATTGGAAGAACAACAGAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTG 654
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 603 AGAAGAGATTGGAAGAACAACAAAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTG 662
Query 655 TCGCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGGGCCATACTT-GGT 713
| |||||||||||||||||||||||||||||||||||||||||||| | || | || |||
Sbjct 663 TTGCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGAGTCA-AGTTTGGT 721
Query 714 GAAGAAAAGGGTTTCACAATTGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGC 773
|||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 722 GAAGAAAAGGGTTTCACAATGGATCTGTTTAGAGATGAAAGAACTAACTACGTTCCTCGC 781
Query 774 CAGAGTTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTA 833
|| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 782 CAAAGCTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGCTATGGACTA 841
Query 834 GGAGATAGTAACTGGTCGCCATTCACGAGAAA---TGCTTGGGATAACAACATGGGAATA 890
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 842 GGAGATAGTAACTGGTCGCCATTCACGAGGAGGGGTGCTTGGGATAACAACATGGGAATA 901
Query 891 TCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATATCTGAAAATGCTGAC 950
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 TCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATATCTGAAAATGCTGAT 961
Query 951 GGGAACGCCTTTGTGTTCAATGGGATGTTCCGGGGTTGACAAAATGCCACGACTCGTCCT 1010
||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct 962 GGGAACGCCTTTGTGTTCAATGGGATGTTCCGGGGATGACAGA-TGCCACGACTCGTCCT 1020
Query 1011 CATTTGGTTTCTAAAATAAACATTTGCCTTCTGCT-GCTTTGGTGTGAATGCTCTGTTGT 1069
|||| ||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |
Sbjct 1021 CATTCGGTTTTTAAAATAAACATTTGCCTTCTGCTTGCTTTGGTGTCAATGCTCTGTT-T 1079
Query 1070 TTTTCTCTTGACGTTAGACATTATACTCTGTTTTCGTTCTCTGTAATATTACAGACGCAT 1129
||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1080 TTTTCTCTTGACGTTAGACCTTATACTCTGTTTTCGTTCGCTGTAATATTAAAGACGCAT 1139
Query 1130 TTTGAGTTGTATCTATCATACATGTTGAAGTCTCTTCATATCTGCATTGTTGCTTATCTT 1189
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1140 TTTGAGTTGTATCTATTATACATGTTGAAGTCTCTTCATA-CTGCATTGTTGCTTATCTT 1198
Query 1190 ATATCACATTCT 1201
||||||||||||
Sbjct 1199 ATATCACATTCT 1210
> AT4G25670.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G25690.2);
Has 30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr4:13085218-13087090 REVERSE LENGTH=1213
Length=1213
Score = 1805 bits (977), Expect = 0.0
Identities = 1138/1212 (94%), Gaps = 25/1212 (2%)
Strand=Plus/Plus
Query 1 TCCTTCTATTATCCTCCCTCTCGTCTTCTTCTTCGTCT-Ct-tttttttAATTATCTCTC 58
|||||||||||||||| ||||| || |||||||||||| || || |||| |||||||||
Sbjct 13 TCCTTCTATTATCCTCTCTCTC-TCGTCTTCTTCGTCTGCTCTTCTTTT--TTATCTCTC 69
Query 59 GAAATTCCTCTTTCTCTTCTTCGTCTGCATCAAACCAGCAACTTTACTTCTGTATTTTTG 118
||||||||||| ||| ||| || ||||||||||| ||||||||||||||||| ||||||
Sbjct 70 GAAATTCCTCTCTCT-TTC-TC-TCTGCATCAAAACAGCAACTTTACTTCTGCGTTTTTG 126
Query 119 TTtctctctctct-ctctctctATTAATTTGAAGGAGTTCTTTGAAAGGCAGCTGCTTCT 177
||| ||||||| | | || | |||||||| ||||||||||||| |||||||||||||||
Sbjct 127 TTTATCTCTCTGTATTATC-CGATTAATTTAAAGGAGTTCTTTG-AAGGCAGCTGCTTCT 184
Query 178 ATGCCATATTGCAGAGAAAATGGGCGAGTCTAAGGGGTGCGGGAATGTTGGACGAATGAT 237
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 ATGCCATATTGCCGAGAAAATGGGCGAGTCTAAGGGGTGCGGGAATGTTGGACGAATGAT 244
Query 238 TCCAAAGAATAAGTCTGCTAACTCTTATAACGTCTCTCTTCGGTTGTCGCCTGTTGTTTC 297
| | |||||||||||||| || ||||||||| ||||||||| |||||| |||||||||||
Sbjct 245 TTCGAAGAATAAGTCTGCGAATTCTTATAACCTCTCTCTTCAGTTGTCTCCTGTTGTTTC 304
Query 298 TTTTTGGGATTGTATTGTCCGCACCATGAGGTATTCCTATATACCAGAGTGGGTGTAGTT 357
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 305 TTTCTGGGATTGTATTGTCCGCACCATGAGGTATTCCTATATACCAGAGTGGGTGTAGTT 364
Query 358 CTTGAGTTACTCTACGACATCATCGAGTTTAGTGCAGTTATTTTAGTTAG-AA-TTATAG 415
|||||||| |||||| ||||||||||||||||||||||| |||||||||| || ||||||
Sbjct 365 CTTGAGTTCCTCTACAACATCATCGAGTTTAGTGCAGTT-TTTTAGTTAGAAATTTATAG 423
Query 416 TCAAGCAATAATGGATCACACGGTGTGCAAGCAAGTTCAGCCAGTCGTTAGGAAAGC-AA 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 424 TCAAGCAATAATGGATCACACGGTGTGCAAGCAAGTTCAGCCAGTCGTTAGGAAAGCGAA 483
Query 475 GGAAGAAACATGGTAATGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGAC 534
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 -GAAGAAGCATGGTAAAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGAC 542
Query 535 GTTTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAGC 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 GTTTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAGC 602
Query 595 AGAAGAGATTGGAAGAACAACAGAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTG 654
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 603 AGAAGAGATTGGAAGAACAACAAAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTG 662
Query 655 TCGCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGGGCCATACTT-GGT 713
| |||||||||||||||||||||||||||||||||||||||||||| | || | || |||
Sbjct 663 TTGCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGAGTCA-AGTTTGGT 721
Query 714 GAAGAAAAGGGTTTCACAATTGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGC 773
|||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 722 GAAGAAAAGGGTTTCACAATGGATCTGTTTAGAGATGAAAGAACTAACTACGTTCCTCGC 781
Query 774 CAGAGTTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTA 833
|| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 782 CAAAGCTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGCTATGGACTA 841
Query 834 GGAGATAGTAACTGGTCGCCATTCACGAGAAA---TGCTTGGGATAACAACATGGGAATA 890
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 842 GGAGATAGTAACTGGTCGCCATTCACGAGGAGGGGTGCTTGGGATAACAACATGGGAATA 901
Query 891 TCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATATCTGAAAATGCTGAC 950
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 TCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATATCTGAAAATGCTGAT 961
Query 951 GGGAACGCCTTTGTGTTCAATGGGATGTTCCGGGGTTGACAAAATGCCACGACTCGTCCT 1010
||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct 962 GGGAACGCCTTTGTGTTCAATGGGATGTTCCGGGGATGACAGA-TGCCACGACTCGTCCT 1020
Query 1011 CATTTGGTTTCTAAAATAAACATTTGCCTTCTGCT-GCTTTGGTGTGAATGCTCTGTTGT 1069
|||| ||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |
Sbjct 1021 CATTCGGTTTTTAAAATAAACATTTGCCTTCTGCTTGCTTTGGTGTCAATGCTCTGTT-T 1079
Query 1070 TTTTCTCTTGACGTTAGACATTATACTCTGTTTTCGTTCTCTGTAATATTACAGACGCAT 1129
||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1080 TTTTCTCTTGACGTTAGACCTTATACTCTGTTTTCGTTCGCTGTAATATTAAAGACGCAT 1139
Query 1130 TTTGAGTTGTATCTATCATACATGTTGAAGTCTCTTCATATCTGCATTGTTGCTTATCTT 1189
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1140 TTTGAGTTGTATCTATTATACATGTTGAAGTCTCTTCATA-CTGCATTGTTGCTTATCTT 1198
Query 1190 ATATCACATTCT 1201
||||||||||||
Sbjct 1199 ATATCACATTCT 1210
> AT4G25692.1 | Symbols: CPuORF13 | conserved peptide upstream
open reading frame 13 | chr4:13090209-13091797 REVERSE LENGTH=1589
Length=1589
Score = 893 bits (483), Expect = 0.0
Identities = 728/839 (87%), Gaps = 46/839 (5%)
Strand=Plus/Plus
Query 192 AGAAAATGGGCGAGTCTAAGGGGTGCGGGAATGTTGGACGAATGATTCCAAAGAATAAGT 251
|||||||||| ||||||| |||||| ||||| | |||| |||||||||||| ||||||
Sbjct 563 AGAAAATGGGAGAGTCTACGGGGTGTGGGAAAGGAGGACTAATGATTCCAAATCATAAGT 622
Query 252 CTGCTAACTCTTATAACGTCTCTCTTCG-GTTGTCGCCTGTTGTTTCTTTTTGGGATTGT 310
||||||| ||||||||| |||| ||| | |||||| | ||||| ||| |||||||||||
Sbjct 623 CTGCTAATTCTTATAACCTCTCCCTT-GAGTTGTCTCTTGTTGACTCTGTTTGGGATTGT 681
Query 311 ATTGTCCGCACCATGAGGTATTCCTATATACCAGAGTGGGTGTAGTTC-TTGAGTTACTC 369
| ||| || ||||||||||||||||||||||| |||||| ||||| || |||| | |||
Sbjct 682 AATGTTCGGACCATGAGGTATTCCTATATACCTGAGTGGTTGTAG-TCTTTGAAATCCTC 740
Query 370 -TACGACATCATCGAGTTTAGTGCA-GTTATTTTAG-T----T---AGAATTATAGTCAA 419
|| |||| | ||||||||||||| ||| ||||| | | ||| |||||| |||
Sbjct 741 TTA-GACA--A-CGAGTTTAGTGCATTTTACTTTAGTTGGAATCAAAGAGTTATAG-CAA 795
Query 420 GCAATAATGGATCACACGGTGTGCAAGCAA---GTTCAGCCAGTCGTTAGGAAAGCAAGG 476
|||||||||||||||||| ||||||||||| ||||||||||| |||||||| |
Sbjct 796 GCAATAATGGATCACACGTTGTGCAAGCAAGTTGTTCAGCCAGTTACTAGGAAAG---TG 852
Query 477 AAGAAACATGGTAATGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGT 536
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 AAGAAGCATGGTAAAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGT 912
Query 537 TTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAGCAG 596
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 913 TTGGAGAAAGCTCTTGCTACTTCTGCAGCCATTCGGGCTGAGCTTGAAAAGAAGAAGCAG 972
Query 597 AAGAGATTGGAAGAACAACAGAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTC 656
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 973 AAGAGATTGGAAGAACAACAAAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTC 1032
Query 657 GCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGGGCCATACTT-GGTGA 715
|||||||||||||||||||||||||||||||||||||||||||| | || | || || ||
Sbjct 1033 GCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGAGTCA-AGTTTGGCGA 1091
Query 716 AGAAAAGGGTTTCACAATTGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCA 775
||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1092 AGAAACGGGTTTCGGAATGGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCA 1151
Query 776 GAGTTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGG 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 AAGTTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGG 1211
Query 836 AGATAGTAACTGGTC-GC--CAT-TCA-CGA-----GAA--ATG-CTTGGGATAACAACA 882
||||||||||||||| | ||| | | | | ||| ||| || ||||||||||||
Sbjct 1212 AGATAGTAACTGGTCAGTGTCATATAAGCCATTCATGAAGGATGTCT-GGGATAACAACA 1270
Query 883 TGGGAATATCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATATCTGAAA 942
||| |||||| || ||||||||||||||||||||||| ||| | ||||||||||||||
Sbjct 1271 TGGTAATATCTGCAGATTTGATTGCTGCTCAGGCTGTTTCGTCACTACAGATATCTGAGG 1330
Query 943 ATGCTGACGGGAACGCCTT-TGTGTTCAATGG-GATGTTCCGGGGTTGACAAAATGCCA 999
| ||||| ||||||| || ||| ||| | | ||||||| |||| |||||||| ||||
Sbjct 1331 ACGCTGATAGGAACGC-TTATGTCTTCGA-GACGATGTTCGGGGGATGACAAAA-GCCA 1386
> AT4G25690.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G25670.2);
Has 73 Blast hits to 60 proteins in 13 species: Archae - 0;
Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 67; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:13090209-13091798
REVERSE LENGTH=1590
Length=1590
Score = 893 bits (483), Expect = 0.0
Identities = 728/839 (87%), Gaps = 46/839 (5%)
Strand=Plus/Plus
Query 192 AGAAAATGGGCGAGTCTAAGGGGTGCGGGAATGTTGGACGAATGATTCCAAAGAATAAGT 251
|||||||||| ||||||| |||||| ||||| | |||| |||||||||||| ||||||
Sbjct 564 AGAAAATGGGAGAGTCTACGGGGTGTGGGAAAGGAGGACTAATGATTCCAAATCATAAGT 623
Query 252 CTGCTAACTCTTATAACGTCTCTCTTCG-GTTGTCGCCTGTTGTTTCTTTTTGGGATTGT 310
||||||| ||||||||| |||| ||| | |||||| | ||||| ||| |||||||||||
Sbjct 624 CTGCTAATTCTTATAACCTCTCCCTT-GAGTTGTCTCTTGTTGACTCTGTTTGGGATTGT 682
Query 311 ATTGTCCGCACCATGAGGTATTCCTATATACCAGAGTGGGTGTAGTTC-TTGAGTTACTC 369
| ||| || ||||||||||||||||||||||| |||||| ||||| || |||| | |||
Sbjct 683 AATGTTCGGACCATGAGGTATTCCTATATACCTGAGTGGTTGTAG-TCTTTGAAATCCTC 741
Query 370 -TACGACATCATCGAGTTTAGTGCA-GTTATTTTAG-T----T---AGAATTATAGTCAA 419
|| |||| | ||||||||||||| ||| ||||| | | ||| |||||| |||
Sbjct 742 TTA-GACA--A-CGAGTTTAGTGCATTTTACTTTAGTTGGAATCAAAGAGTTATAG-CAA 796
Query 420 GCAATAATGGATCACACGGTGTGCAAGCAA---GTTCAGCCAGTCGTTAGGAAAGCAAGG 476
|||||||||||||||||| ||||||||||| ||||||||||| |||||||| |
Sbjct 797 GCAATAATGGATCACACGTTGTGCAAGCAAGTTGTTCAGCCAGTTACTAGGAAAG---TG 853
Query 477 AAGAAACATGGTAATGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGT 536
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 854 AAGAAGCATGGTAAAGATGAATTTGATCGTATCAAACAAGCTGAGAAGAAAAAGAGACGT 913
Query 537 TTGGAGAAAGCTCTTGCTACTTCTGCAGCCATCCGGGCTGAGCTTGAAAAGAAGAAGCAG 596
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 914 TTGGAGAAAGCTCTTGCTACTTCTGCAGCCATTCGGGCTGAGCTTGAAAAGAAGAAGCAG 973
Query 597 AAGAGATTGGAAGAACAACAGAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTC 656
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 974 AAGAGATTGGAAGAACAACAAAGGTTAGATGAAGAAGGAGCTGCAATTGCAGAAGCTGTC 1033
Query 657 GCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGGGCCATACTT-GGTGA 715
|||||||||||||||||||||||||||||||||||||||||||| | || | || || ||
Sbjct 1034 GCTCTGCACGTCCTACTGGGCGAAGATTCTGATGATTCATCTCGAGTCA-AGTTTGGCGA 1092
Query 716 AGAAAAGGGTTTCACAATTGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCA 775
||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1093 AGAAACGGGTTTCGGAATGGATCTGTTTAGAGATGAAAGAACCAACTATGTTCCTCGCCA 1152
Query 776 GAGTTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGG 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1153 AAGTTGTGCTAGCTATGCGGTTCAAGGGATTGGGTTTGTGTCAAATGGTTATGGACTAGG 1212
Query 836 AGATAGTAACTGGTC-GC--CAT-TCA-CGA-----GAA--ATG-CTTGGGATAACAACA 882
||||||||||||||| | ||| | | | | ||| ||| || ||||||||||||
Sbjct 1213 AGATAGTAACTGGTCAGTGTCATATAAGCCATTCATGAAGGATGTCT-GGGATAACAACA 1271
Query 883 TGGGAATATCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATATCTGAAA 942
||| |||||| || ||||||||||||||||||||||| ||| | ||||||||||||||
Sbjct 1272 TGGTAATATCTGCAGATTTGATTGCTGCTCAGGCTGTTTCGTCACTACAGATATCTGAGG 1331
Query 943 ATGCTGACGGGAACGCCTT-TGTGTTCAATGG-GATGTTCCGGGGTTGACAAAATGCCA 999
| ||||| ||||||| || ||| ||| | | ||||||| |||| |||||||| ||||
Sbjct 1332 ACGCTGATAGGAACGC-TTATGTCTTCGA-GACGATGTTCGGGGGATGACAAAA-GCCA 1387
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58985640375
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5