BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492268 Length=655 Score E Sequences producing significant alignments: (Bits) Value AT4G25590.1 | Symbols: ADF7 | actin depolymerizing factor 7 | c... 974 0.0 > AT4G25590.1 | Symbols: ADF7 | actin depolymerizing factor 7 | chr4:13058936-13060107 REVERSE LENGTH=672 Length=672 Score = 974 bits (527), Expect = 0.0 Identities = 626/671 (93%), Gaps = 18/671 (3%) Strand=Plus/Plus Query 1 AACAACAAATCTTGCCATCTTCCTCAAGTCTTATCATAGAAACTAGACAAAAGCCATGGC 60 ||||||||||||| | ||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 3 AACAACAAATCTTTCGATCTTCCTCAAGTCTTATCATAGAACCTAGACAAAAGCAATGGC 62 Query 61 TAACGCGGCGTCGGGGATGGCTGTGGAGGACGAATGCAAGCTGAAGTTTTTGGAGCTAAA 120 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || Sbjct 63 GAACGCGGCGTCGGGGATGGCAGTGGAGGACGAGTGCAAGCTGAAGTTTTTGGAGCTCAA 122 Query 121 GTCGAAAAGAAACTATCGATTCATAATATTCAGGATAGACGGGCAACAAGTGGTGGTCGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GTCGAAAAGAAACTATCGATTCATAATATTCAGGATAGACGGGCAACAAGTGGTGGTCGA 182 Query 181 AAAGTTAGGAAACCCGGAAGAGACTTACGGA-GATTTCACAGCCTCCCTCCCTGCGAACG 239 ||||||||||||||| || ||||||||| || |||||||| ||||||||||||||||||| Sbjct 183 AAAGTTAGGAAACCCCGATGAGACTTAC-GATGATTTCACCGCCTCCCTCCCTGCGAACG 241 Query 240 AGTGCCGCTATGCAGTCTTCGATTTTGACTTCATCACCGATGAAAATTGCCAGAAGAGCA 299 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 242 AGTGCCGCTATGCAGTCTTCGACTTTGACTTCATCACCGATGAAAATTGCCAGAAGAGCA 301 Query 300 AAATCTTCTTCATCGCATGGTCACCAGATTCATCAAGGGTGAGGATGAAGATGGTGTATG 359 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 AAATCTTCTTCATTGCATGGTCACCAGATTCATCAAGGGTGAGGATGAAGATGGTGTATG 361 Query 360 CAAGCTCTAAGGATAGATTCAAGAGAGAATTGGATGGCATTCAGGTGGAGTTACAAGCCA 419 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 362 CAAGCTCTAAGGATAGATTTAAGAGAGAATTGGACGGCATTCAGGTGGAGTTACAAGCCA 421 Query 420 CTGATCCTAGCGAGATGAGCTTCGACATTATCAAAAGCCGAGCTCTCTAGATCATTTTCA 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 422 CTGATCCTAGCGAGATGAGCTTCGACATTATCAAAAGCCGAGCTCTCTAGATCCTTTTCA 481 Query 480 ACGATCTATATCTCTATCATCGATCCTGATCTTCACCCCAAAAAATTACCATGTTAT-T- 537 |||||||||||||||||||||||||||||||||||| ||||||||||||||| || | Sbjct 482 ACGATCTATATCTCTATCATCGATCCTGATCTTCACAA-AAAAAATTACCATGTCATCTG 540 Query 538 -T-G------G--TT-TT-ATCTGTCTTATTCATTTTATAAAAATTCTTTTCTATCCACT 585 | | | || || ||||||||||||||||||||||| |||||||||| || ||| Sbjct 541 GTTGAAAACTGAATTCTTTATCTGTCTTATTCATTTTATAAACATTCTTTTCTTTCTACT 600 Query 586 TCCGTTTGGAAGGGAGGTTGAAACCATGTAGCTT-GTTGTGTAACTCTCAAATAAACGAA 644 ||||||||| || || ||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct 601 TCCGTTTGGGAGAGAAGTTCAAACCTTGTAGCTTTGTTGTGTAACTCTCAAATAAACGAA 660 Query 645 TAATATTTCCT 655 ||||||||||| Sbjct 661 TAATATTTCCT 671 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31647512610 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5