BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492300 Length=712 Score E Sequences producing significant alignments: (Bits) Value AT4G25315.1 | Symbols: | Expressed protein | chr4:12951360-129... 1160 0.0 > AT4G25315.1 | Symbols: | Expressed protein | chr4:12951360-12952870 REVERSE LENGTH=719 Length=719 Score = 1160 bits (628), Expect = 0.0 Identities = 684/712 (96%), Gaps = 0/712 (0%) Strand=Plus/Plus Query 1 CTGACCCGTTTCTTCTTCCGGCACTGAGCAGACAGGATGAGCTCGGAGAACGAAGACTCT 60 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 1 CTGACCCGTTTCTTCTTCCGGCACTAAGCAGACACGATGAGCTCGGAGAACGAAGACTCT 60 Query 61 TCAGCTGTGCGACGGCGCGTGTCCTGCACTAAATGCTTCGACGCTCTCTGGTTCTGCTAC 120 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCATCTGTGCGACGGCGCGTGTCCTGCACTAAATGCTTCGACGCTCTCTGGTTCTGCTAT 120 Query 121 TGGATGTCTAGATGGTCCAACATAACCAGCAATGGCGATGACACAGGAAAAGATTTGGCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 121 TGGATGTCTAGATGGTCCAACATAACCAGCAATGGCGATGACACAGGAAACGATTTGGCA 180 Query 181 CCGTTTTACCAAATGCAGCAGTATTACCGGGTTGGAAAACTTGATGATTGTACTAAGAAG 240 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CCATTTTATCAAATGCAGCAGTATTACCGGGTTGGAAAACTTGATGATTGTACTAAGAAG 240 Query 241 TTCTCTGATCTCTTTGATTGTCTTTCCTTGAAGACAAAAATAGCTTCTGAAGTCGAGAAA 300 |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| | Sbjct 241 TTCTCTGACCTCTTTGATTGTCTTTCCTTGAAGACAAAAAGAGCTTCTGAAGCCGAGAGA 300 Query 301 ATTCTGGAAGAGCAAGAGAAAGCTGCTGCGGAAAAACATATTTGGGTTATGCGAACACAA 360 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 301 ATTCTGGAAGAGCAAGAGAAAGCTGCTGCGGAAAAACATATCTGGATTATGCGAACACAG 360 Query 361 GAAGAAGCTGTAAGTCATTGGAATGAGACTTTTGGGCATTTGGATGATCCAAATTCTTAG 420 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 361 GAAGAAGCTGTAAGCCATTGGAATGAGACTTTTGGGCATTTGGAAGATCCAAATTCTTAG 420 Query 421 AAGGTACAGTTTCACGCTTTAGATTCTCTACTGCATTCTTGACGGAGATTTTTACTTCCA 480 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 421 AAGGTACAGTTTCACGCTTTGGATTCTCTGCTGCATTCTTGACGGAGATTTTTACTTCCA 480 Query 481 AGAAACTCGATGTCTGCTAGAGATCTACAGATTATTCTGCCGGATAGAGAAAGCTTTTTG 540 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 481 AGAAACTCGAGGTCTGCTAGAGATCTGCAGATTATTCTGCCGGATAGAGAAAGCTTTTTG 540 Query 541 TCATCGCTTACCATGAACATTTTGAGCAAACTTAAGTTATTCCTCAATCTCCAAAGAAGC 600 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 541 TCATCGCTTACCATGAACATTTTGAGCAAACTTAAGTTATACCTCAATCTCCAAAGAAGC 600 Query 601 GTACCTCGAAAGATGGAGGGATGTTTTGAGACCATTTATTGGACTGTGGATGTATTTGGT 660 |||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||| Sbjct 601 GTACCTCGAAAGATGGGGGGATGTTTTGAGATCATTTATTGGACTGAGAATGTATTTGGT 660 Query 661 TGAATGGTAACAACAGAAAATACATTGCTAAATAAAATCTCACATCTGTTTC 712 ||| ||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 661 TGATTGGTAACAAAAAAAAATACATTGCTAAATAAAATCTCACATCTGTTTC 712 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34510858989 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5