BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492327
Length=2703
Score E
Sequences producing significant alignments: (Bits) Value
AT4G25090.1 | Symbols: | Riboflavin synthase-like superfamily ... 3906 0.0
AT5G51060.1 | Symbols: RHD2, ATRBOHC, RBOHC | NADPH/respiratory... 1321 0.0
> AT4G25090.1 | Symbols: | Riboflavin synthase-like superfamily
protein | chr4:12878775-12883599 REVERSE LENGTH=2705
Length=2705
Score = 3906 bits (2115), Expect = 0.0
Identities = 2529/2721 (93%), Gaps = 59/2721 (2%)
Strand=Plus/Plus
Query 1 ATGCAGAGAGTTAGCTTTGAAGTGACGGATACAGAGGCGGAGAAGAGCAGCAGCGAGACA 60
||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||| |
Sbjct 1 ATGCAGAGAGTGAGCTTTGAAGTAAAGGACACAGAGGCGGAGAAGAGCAGCAGCGAG--A 58
Query 61 GTTCCACTGAGCGGAGCCGGAGCTTTGCCGTCGACCTTCAAAAATCCGGCGATGGAAAAC 120
| ||| ||| |||| ||||||||||||||| | |||||||||||||||||||
Sbjct 59 --T--ACT-----GAG-CGGATCTTTGCCGTCGACCTACCGAAATCCGGCGATGGAAAAC 108
Query 121 GTTGGAAACGCGGCGGATGATGGACCGAGCGTGAAGAACAATCCGAAAC-TGAATGCGCA 179
||||||||||||| |||||||||| |||||||||||||||||||||||| || || |||
Sbjct 109 GTTGGAAACGCGGTGGATGATGGATCGAGCGTGAAGAACAATCCGAAACTTG-ATATGCA 167
Query 180 GAAACAGAACGGTCTGGTGAAGTTGCTCGCCTCAGTTTCTAACCAGCTCATGAAGTGTTT 239
||||||||||||| ||||||| | | | | | | || | |||||| ||
Sbjct 168 GAAACAGAACGGTTTGGTGAA---G-T-G-----G--T-T---CA----A-GAAGTGCTT 206
Query 240 GACATTGGTCA-CTAGAGAGAGTAAGACACCTCGATTGGACCGGTCGAAGTCAACGGCCG 298
|||| |||| | || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 207 GACAATGGT-ATCTGGAGAGAGTAAGGCACCTCGATTGGACCGGTCGAAGTCAACGGCCG 265
Query 299 GTCAGGCCTTGAAAGGGCTCAAGCTCATTAGTAAGACCGACGGCAACGCTGCCTGGACGG 358
||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||| |
Sbjct 266 GTCAGGCCTTGAAAGGGCTCAAGATCATCAGTAAGACCGACGGTAACGCTGCCTGGACCG 325
Query 359 TCGTGGAGAAGCGGTACTTGAAGATCACGGCCAATACTGATGGATTGCTGCTTCGGTCAA 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 326 TCGTGGAGAAGCGGTACTTGAAGATCACGGCCAATACTGATGGATTGCTGCTTCGGTCGA 385
Query 419 AATTCGGTGAATGCATAGGGATGAACTCAAAAGAATTTGCCTTGGAATTGTTCGACGCAT 478
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 386 AATTCGGTGAATGCATAGGGATGAACTCAAAAGAATTTGCCTTGGAATTGTTTGACGCCT 445
Query 479 TAGCTAGAAAAAGTCACCTGAAAGGGGATGTGATTACTGAGACCGAGTTGAAGAAATTTT 538
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 446 TAGCTAGAAAAAGTCACTTGAAAGGGGATGTGATTACTGAGACCGAGTTGAAGAAATTTT 505
Query 539 GGGAACAAATAAATGATAAAAGCTTTGATTCCAGGCTTATCACGTTCTTTGACTTGATGG 598
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 506 GGGAACAAATAAATGATAAAAGCTTTGATTCAAGGCTTATCACGTTCTTTGACTTGATGG 565
Query 599 ATAAAGACGCCGATGGTAGACTAACCGAAGATGAAGTTAGAGAGATCATCAATCTTAGTT 658
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| |||||||
Sbjct 566 ATAAAGACTCGGATGGTAGACTTACGGAAGACGAAGTTAGAGAGATCATCAAGCTTAGTT 625
Query 659 CGTCTGCCAACCATCTGTCATGCATCCAGAAA-AAGGCAGATGAATATGCAGCAATGATA 717
| |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 626 CTTCTGCCAATCATCTGTCATGCATCCA-AAACAAGGCAGATGAATATGCAGCAATGATA 684
Query 718 ATGGAAGAGCTTGACCCTGATCATATGGGATACATCATGATGGAGAGTCTTAAGAAATTG 777
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 685 ATGGAAGAGCTTGACCCTGATCATATGGGATACATCATGATGGAGAGTCTAAAGAAATTG 744
Query 778 CTTCTGCAAGCGGAAACAAAATCTTTAAGCACA-AC-T-AATAGTGAAGAAAGAAAGGAG 834
|||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||
Sbjct 745 CTTCTGCAAGCGGAAACAAAATCTGTAAGCACAGATATTAATAGTGAAGAAAGAAAGGAG 804
Query 835 CTGAGCGATATGCTAAGTGAGAGTCTTAAGCCTACGCGTGACCCTAACCATTTGAGGAGA 894
|||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 805 CTGAGCGACATGCTAACTGAGAGTCTCAAGCCTACACGTGACCCTAACCATTTGAGGAGA 864
Query 895 TGGTACCGTCAACTAAGATTCTTCGTACTGGATAGCTGGCAAAGAATTTGGGTGATAGCG 954
||||| |||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||
Sbjct 865 TGGTATTGTCAACTAAGATTCTTTGTATTGGATAGTTGGCAAAGAGTTTGGGTGATAGCG 924
Query 955 TTATGGCTCGCGATTATGGCCATCCTCTTCGCGTACAAATATATTCAATACAAGAATAGA 1014
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 925 TTATGGCTCACGATTATGGCCATCCTCTTCGCGTACAAGTATATTCAATACAAGAATAGA 984
Query 1015 GCAGTGTATGAAGTCTTGGGGCCTTGTGTGTGCTTGGCTAAAGGTGCAGCAGAGACGTTG 1074
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 985 GCAGTGTATGAAGTGTTGGGGCCTTGTGTGTGCTTGGCTAAAGGTGCAGCAGAGACGCTG 1044
Query 1075 AAGCTAAACATGGCCTTAATTCTGTTACCTGTATGCAGAAATACCATCACATGGCTTAGA 1134
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1045 AAGCTAAACATGGCCCTAATTCTGTTACCTGTTTGCAGAAATACCATCACATGGCTTAGA 1104
Query 1135 AATAAGACTAGCTGGTTGGGTGTTTTTGTCCCTTTTGATGACAACCTCAATTTTCATAAG 1194
||||||||||| | |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1105 AATAAGACTAG--G-TTGGGTGTTTTTGTTCCTTTTGATGACAACCTCAATTTTCACAAG 1161
Query 1195 GTTATAGCGGTGGGAATTACGATAGGAGTAGGCATACACTCGGTGGCCCACTTGGCATGT 1254
|||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||| |||
Sbjct 1162 GTTATAGCGGTGGGAATTGCGATAGGAGTAGCCATACACTCTGTGTCCCACTTGGCGTGT 1221
Query 1255 GATTTTCCACGGCTAATCGCAGCAACTCCAGCGCAATACATGCCTCTCGAGAAA-TTCTT 1313
|||||||||| ||||||||| |||||||||||| ||||||||||||||| |||| |||||
Sbjct 1222 GATTTTCCACTGCTAATCGCGGCAACTCCAGCGGAATACATGCCTCTCG-GAAAATTCTT 1280
Query 1314 CGGGGAGGAGCAACCAAAGAGGTACTTGCATTTTGTGAAGTCAACAGAAGGAATAACAGG 1373
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1281 CGGAGAGGAGCAACCAAAGAGATACTTGCATTTTGTGAAGTCAACAGAAGGAATAACAGG 1340
Query 1374 GCTTGTAATGGTCCTCTTGATGGTTATTGCTTTTACACTGGCTATGCCTTGGTTTAGACG 1433
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1341 GCTTGTAATGGTTTTCTTGATGGTTATTGCTTTTACACTGGCTATGCCTTGGTTTAGACG 1400
Query 1434 AGGGAAGCTAGaaaaaaaGCTTCCAGGGCCACTAAAGAAACTCGCGAGCTTCAACGCCTT 1493
||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct 1401 GGGGAAGCTAGAGAAAAAGCTACCAGGGCCACTAAAGAAACTTGCGAGCTTCAATGCCTT 1460
Query 1494 CTGGTACACTCACCATTTGTTTGTTATAGTCTACATTCTACTTGTCCTTCACGGATACTA 1553
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1461 CTGGTACACTCACCATTTGTTCGTTATAGTCTACATTCTCCTTGTCCTTCACGGATACTA 1520
Query 1554 CTTGTACCTCAGTAAGGAATGGTACAAGAAAACGACGTGGATGTACTTGGCAGTACCAGT 1613
| | || |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1521 CATATATCTCAACAAGGAATGGTACAAGAAAACGACGTGGATGTACTTGGCAGTACCAGT 1580
Query 1614 AGCTCTCTATGCATACGAGAGATTGATACGAGCATTCAGGTCCAGCATCAGGACTGTAAA 1673
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1581 AGCTCTTTATGCATACGAGAGATTGATACGAGCATTCAGGTCCAGCATCAGGACAGTAAA 1640
Query 1674 AGTTCTTAAGGTCGCGGCTTATCCGGGAAAAGTATTGACTTTGCAAATGTCAAAGCCTAC 1733
||| |||||| | || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1641 AGTCCTTAAGATGGCAGCTTATCCTGGAAAAGTATTGACTTTGCAGATGTCAAAGCCTAC 1700
Query 1734 AAACTTCAAATACAAGAGCGGTCAATACATGTTTGTAAATTGTCCAGCAGTCTCACCGTT 1793
|||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1701 AAACTTCAAATACATGAGCGGCCAATACATGTTTGTAAATTGTCCAGCAGTTTCACCGTT 1760
Query 1794 TGAGTGGCATCCATTTTCAATAACTTCAACACCACAAGAAGACTATCTGAGCGTTCATAT 1853
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1761 TGAGTGGCATCCATTTTCAATAACTTCTACACCACAAGACGACTATCTGAGCGTTCATAT 1820
Query 1854 AAAATCACTGGGAGATTGGACAGAGGCTATCCAAGGAGTTTTCTCCGAGGTGTCTAAGCC 1913
|||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1821 AAAAGCATTGGGAGATTGGACAGAGGCTATCCAAGGAGTTTTCTCAGAGGTGTCTAAGCC 1880
Query 1914 ACCTCCGGTCGGAGACATGTTGCATGGTGCAAATAGTCCCGGTTTTCCCAAAATTATGAT 1973
|||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct 1881 ACCTCCGGTCGGAGACATGTTGAATGGTGCAAATAGTCCCCGTTTCCCCAAAATTATGAT 1940
Query 1974 TGATGGTCCGTACGGCGCACCAGCTCAAGACTACAAGAAGTACGAGGTGGTTCTGCTGAT 2033
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1941 TGATGGTCCGTACGGCGCACCAGCTCAAGACTACAAGAAGTACGAGGTGGTCCTGCTGAT 2000
Query 2034 CGGTCTTGGCATTGGAGCCACCCCGATGATCAGCATTATCAAGGACATTATCAACAATAC 2093
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2001 AGGTCTTGGCATTGGAGCCACCCCGATGATCAGCATTATCAAGGACATTATTAACAATAC 2060
Query 2094 GGAGACCAAGGAGCAGCTCAGCCAAATGGAGAAGGGGGCTCCACAGGAGCAACAAGTTAA 2153
|||||||||||| || |||||||||||||||||||| | ||||| |||||||||| |||
Sbjct 2061 GGAGACCAAGGAACAACTCAGCCAAATGGAGAAGGGATCGCCACAAGAGCAACAAGGTAA 2120
Query 2154 GAAAGAAACTTTCAAGACGCGAAGGGCTTACTTCTACTGGGTAACAAAGGAGCAGGGTAC 2213
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 2121 TAAAGAAACTTTCAAGACTCGAAGGGCTTACTTCTACTGGGTAACAAAGGAGCAGGGCAC 2180
Query 2214 ATTTGATTGGTTCAAGAACGTCATGAACGAGATTGCAGAACGAGACAAAAGCAAAGTCAT 2273
||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||
Sbjct 2181 ATTTGATTGGTTCAAGAACATCATGAACGAGATCGCAGAACGGGACAAAAGTAAAGTCAT 2240
Query 2274 AGAACTACACAATCATTGCACTAGTGTCTACGAAGAAGGAGACGTTCGTTCCGCACTCAT 2333
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2241 AGAACTACACAATCATTGCACTAGTGTCTACGAAGAAGGAGACGTTCGTTCCGCGCTCAT 2300
Query 2334 ACGGATGCTTCAGTCTCTAAATTATGCCAAGAATGGTTTAGACATTGTTGCTGGGACAAG 2393
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2301 ACGGATGCTTCAGTCTCTTAATTATGCCAAGAATGGTTTAGACATTGTTGCTGGGACAAG 2360
Query 2394 GGTCATGTCCCATTTCGCCAGACCTAATTGGAAAAACGTTTACAAACAGATTGCCATGGA 2453
||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2361 GGTCATGTCCCATTTCGCCCGACCTAATTGGAAAAACGTCTACAAACAGATAGCCATGGA 2420
Query 2454 TCACCCTGGTGCTAATGTTGGAGTGTTCTATTGTGGAGCACCGGTATTGACGAAGGAGTT 2513
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2421 TCACCCTGGCGCTAATGTTGGAGTGTTCTATTGTGGAGCACCGGTATTGACGAAGGAGTT 2480
Query 2514 AAGGCA-TCTAGCTTTGGAATTCACACACAAGACAAGTACTAGATTCTCTTTCCACAAAG 2572
|||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2481 AAGGCAAT-TAGCTTTGGAATTCACACACAAGACCAGTACTAGATTCTCTTTCCACAAAG 2539
Query 2573 AGAACTTCTAAAGACAGTGAAGCTTA---C---A--CCCACATTAATGCTGATAGAGTA- 2623
|||||||||||||||| ||||||||| | | |||||| |||||||||||| |
Sbjct 2540 AGAACTTCTAAAGACATTGAAGCTTATAGCTTTATACCCACAAAAATGCTGATAGACTTC 2599
Query 2624 TGCTGGCCAACAAATTATTGAAATTTGTGG-AGTAAGTGTGTTACGTTTGTGTTTTGAAA 2682
|| ||| |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||
Sbjct 2600 TGATGGTCAACAAATTAATGAAATTTGTGGGAGTAAGTATGTTACATTTGTGTTTTGAAA 2659
Query 2683 ATTAAATTTTGGTGTTGTTTT 2703
|||||||||||||||| ||||
Sbjct 2660 ATTAAATTTTGGTGTTATTTT 2680
> AT5G51060.1 | Symbols: RHD2, ATRBOHC, RBOHC | NADPH/respiratory
burst oxidase protein D | chr5:20757284-20762431 REVERSE
LENGTH=3174
Length=3174
Score = 1321 bits (715), Expect = 0.0
Identities = 1841/2369 (78%), Gaps = 139/2369 (6%)
Strand=Plus/Plus
Query 299 GTCAGGCCTTGAAAGGG-CTCAAGCTCATTAGTAAGACCGACGGCAACGCTGCCTGGACG 357
|||| || ||| ||||| || ||| |||||||||| |||||||| ||| | ||| |
Sbjct 672 GTCAAGCGTTG-AAGGGACTTAAGTTCATTAGTAAAACCGACGGTGGCGCCGGTTGGTCT 730
Query 358 GTCGTGGAGAAGCGGTACTTGA--AGATCACGGCCAATACTGATGGATTGCTGCTTCGGT 415
| |||||||||||||| || | |||| || || | ||| | |||| | || ||||||
Sbjct 731 GCCGTGGAGAAGCGGT--TTAATCAGATTACCGCGACTACCGGTGGACTACTTCTTCGGA 788
Query 416 CAAAATTCGGTGAATGCATAGGGATGAAC-TCAAAAGAATTTGCCTTGGAATTGTTCGAC 474
|||| ||||||||||||||||| ||| || ||||| || ||||| |||||| |||| ||
Sbjct 789 CAAAGTTCGGTGAATGCATAGGAATG-ACTTCAAAGGATTTTGCTTTGGAACTGTTTGAT 847
Query 475 GCATTAGCTAGAAAAAGTCACCTGAA-AGGGGATGTGATT-ACT-GAGACCGAGTTGAAG 531
||||| ||||||| ||| | | || |||||| |||||| | | |||| | | | |||
Sbjct 848 GCATTGGCTAGAAGAAGGAATAT-AACAGGGGAAGTGATTGA-TGGAGATC-AACTAAAG 904
Query 532 AAATTTTGGGAACAAATAAATGATAAAAGCTTTGATTC-CAGGCTTATCACGTTCTTTGA 590
| |||||||||||||| |||||| |||| |||||||| | |||||| || ||||||||
Sbjct 905 GAGTTTTGGGAACAAATTAATGATCAAAGTTTTGATTCTC-GGCTTAAGACATTCTTTGA 963
Query 591 CTTGATGGATAAAGACGCCGATGGTAGACTAACCGAAGATGAAGTTAGAGAGATCATCAA 650
| || |||||||||| || ||||||||||| || ||||| |||||||||||||| ||||
Sbjct 964 CATGGTGGATAAAGATGCTGATGGTAGACTTACAGAAGACGAAGTTAGAGAGATTATCAG 1023
Query 651 TCTTAGTTCGTCTGCCAACCATCTGTCATGC-ATCCAGAAAAAG-GCAGATGAATATGCA 708
||||||| | ||||| || |||| || | | || ||| || || || ||||||||||||
Sbjct 1024 TCTTAGTGCTTCTGCGAATAATCTATC-TACAATACAG-AAGAGAGCTGATGAATATGCA 1081
Query 709 GCAATGATAATGGAAGAGCTT-GACCCTGATC-ATATGGGATACATCATGATGGAGAGTC 766
||| |||| ||||||||| || || || || | |||| |||||||||||| |||||||||
Sbjct 1082 GCATTGATCATGGAAGAG-TTGGATCCAGA-CAATATAGGATACATCATGTTGGAGAGTC 1139
Query 767 TTAAGAAAT-TGCTTCTGCAAGCGGAAACAAAATCTTTAAGCACAACTAA-TAGTGAAGA 824
|| || | | ||||| ||||||||| |||| | ||| | | | ||| || || || ||
Sbjct 1140 TTGAG-ACTCTGCTTTTGCAAGCGGCAACACAGTCTGT--G-ATAAC-AAGTACTGGGGA 1194
Query 825 AAGAAAGGAGCTGAG-CGATATGCTAAGTGAGAGTCTTAAGCCTACGCGTGACC-CTAAC 882
|||||| | ||||| | ||||| | ||| |||| |||||||||||| | ||| | |||
Sbjct 1195 GAGAAAGAATCTGAGTC-ATATGATGAGTCAGAGGCTTAAGCCTACGTTTAACCGC-AAC 1252
Query 883 CATTTGAGGAGATGGTACCGTCAACTAAGATTCTTCGTACTGGATAGCTGGCAAAGAAT- 941
| |||| | ||||||||||| || ||||||||| | | || | ||||||||| ||
Sbjct 1253 CCGTTGAAGCGATGGTACCGTGGTCTTAGATTCTTCTTGTTAGACAACTGGCAAAG-ATG 1311
Query 942 TTGGGTGATAGCGTTATGGCTCGCGA-TTATGGCCATCCTCTTCGCGTACAAATATATTC 1000
|||||| |||| | ||||| || | ||||||| || |||||| | ||||||||||| |
Sbjct 1312 TTGGGTTATAGTGCTATGGTTC-ATAGTTATGGCTATACTCTTCACCTACAAATATATCC 1370
Query 1001 AATACAAGAATAGAGCAGTGTATGAAGTCTTGGG-GCCTTGTGTGTGCTTGGCTAAAGGT 1059
|||||| | ||| | |||||| ||| |||| | |||||||||| |||||||||||
Sbjct 1371 AATACAGGCGTAGCCCTGTGTATCCAGTGATGGGTG-ATTGTGTGTGCATGGCTAAAGGT 1429
Query 1060 GCAGCAGAGAC-GTTGAAGCTAAACATGGCCTTAATTCTGTTACCTGTATGCAGAAATAC 1118
|| ||||| || | ||||||| |||||||| || ||||| |||||||| || ||||| ||
Sbjct 1430 GCTGCAGAAACAG-TGAAGCTGAACATGGCTTTGATTCTCTTACCTGTTTGTAGAAACAC 1488
Query 1119 CATCACATGGCTTAGAAATAAGACTAGCTGGTTGGGT-GTTTTTGTCCCTTTTGATGACA 1177
|||||||||||||||||||||||| | |||||||| | | ||||||| ||||||||||
Sbjct 1489 CATCACATGGCTTAGAAATAAGAC---CAGGTTGGGTCG-TGTTGTCCCATTTGATGACA 1544
Query 1178 ACCTCAATTTTCATAAGGTTATAGCGGTGGGAATTACGA-TAGGAGT-AGGCATACAC-T 1234
| ||||| || || ||||||||||||||||| |||| | | ||||| | | || |||
Sbjct 1545 ATCTCAACTTCCACAAGGTTATAGCGGTGGGGATTA-TAGTTGGAGTAACG-ATGCACGC 1602
Query 1235 CGGTGGCCCACTTGGCATGTGATTTTCCACGGCTAATCGCA-GCAACTCCAG-CGCAATA 1292
||| ||| || || || |||||||| || ||| || | || |||||||||| || |||
Sbjct 1603 CGG-GGCACATTTAGCGTGTGATTTCCCGCGGTTACT-ACATGCAACTCCAGAGGC-ATA 1659
Query 1293 CATGCCTCTCGAGA-AATTCTTCGGGGAGGAGCAACCAAAGAGGTACTTGCATTTTGTGA 1351
| |||| | ||| | || || ||||| |||||||||||||| |||| ||||||||| |
Sbjct 1660 TAGGCCT-TTAAGACAGTTTTTTGGGGATGAGCAACCAAAGAGCTACTGGCATTTTGTAA 1718
Query 1352 AGTCAACAGAAGGAATAACAGGGCTTGTAATGGTCCTCTTGATGGTTATTGCTTTTACAC 1411
| || |||||| ||||| || ||||| ||||| | || |||| ||||| || ||||
Sbjct 1719 ACTCGGTAGAAGGTATAACCGGACTTGTGATGGTTTTGTTAATGGCGATTGCATTCACAC 1778
Query 1412 TGGCTATGCCTTGGTTTAGACGAGGGAAGCTAGaaaaaaaGCTTCCAGGGCCACTAAAGA 1471
| || | ||||||||| ||| |||||||||| ||| | |||||||| ||| ||||||
Sbjct 1779 TAGCCACGCCTTGGTTCAGAAGAGGGAAGCT---AAACTATCTTCCAGGACCATTAAAGA 1835
Query 1472 AACTCGCGAGCTTCAACGCCTTCTGGTACACTCACCATTTGTTTGTTATAGTCTACATTC 1531
|||| || |||||||| ||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1836 AACTAGCTAGCTTCAATGCCTTCTGGTACACTCATCATTTGTTTGTCATAGTCTACATTC 1895
Query 1532 TACTTG-TCCTTCACGGATACTACTTGTACCTCAGTAAG-GAATGGTACAAGAAAACGAC 1589
| |||| | | ||| |||||||||||||| |||| || || ||| |||| ||||||||
Sbjct 1896 TTCTTGTTGC-TCATGGATACTACTTGTATCTCA-CCAGAGACTGGCACAATAAAACGAC 1953
Query 1590 GTGGATGTACTTGGCAGTACCAGTAGCTCTCTATGCATACGAGAGATTGATACGAGCATT 1649
|||||||| |||| |||||||| | ||| || || | || || |||||| |||||||
Sbjct 1954 TTGGATGTATTTGGTGGTACCAGTGGTTCTATACGCGTGTGAAAGGTTGATAAGAGCATT 2013
Query 1650 CAGGTCCAGCATC-AGGACTGT-AAAAGTTCTTAAGGTCGCGGCTTATCCGGGAAAAGTA 1707
|||||| |||||| ||| | || | | || || || || | |||||| ||||| ||
Sbjct 2014 CAGGTCGAGCATCAAGG-CGGTGACTA-TTAGGAAAGTAGCAGTTTATCCAGGAAACGTG 2071
Query 1708 TTGAC-TTTGCAAATGTCAAAGCCTAC-AAACTTCAAATACAAGAGCGGTCAATACATGT 1765
|| | || || |||||| |||| | |||||||||||||||||| |||||||||||||
Sbjct 2072 CTGGCAATT-CACTTGTCAAGGCCT-CAAAACTTCAAATACAAGAGTGGTCAATACATGT 2129
Query 1766 TTGTAAATTGTCCAGCAGTCTCACCGTTTGAGTGGCATCCATTTTCAATAACTTCAACAC 1825
|||| || ||| | || || || || ||||| ||||||||||||||||| || || |||
Sbjct 2130 TTGTTAACTGTGCTGCTGTTTCTCCATTTGAATGGCATCCATTTTCAATCACATCTGCAC 2189
Query 1826 CACAAGAAGACTATCTGAGCGTTCATA-TA-AAATCACTGGGAGATTGGACA-GAGGCTA 1882
||||||| || || || || ||||| | || | || |||| ||||||||| || |||
Sbjct 2190 CACAAGATGATTACCTAAGTGTTCACATTAGAGTTC-TTGGG-GATTGGACACGA-GCTC 2246
Query 1883 TCCAAGGAGTTTTCTCCGAGGTGTCTAAGCCACC-TC--C----------GGTC-G---- 1924
|| ||||||| ||||| ||||||| ||||||||| | | |||| |
Sbjct 2247 TCAAAGGAGTCTTCTCTGAGGTGTGTAAGCCACCACCGGCAGGAGTTAGTGGTCTGCTTA 2306
Query 1925 GA---GACATGTTGCATGGTGCAAATAGTCCCGGTTTTCCCAAAATTAT-GATTGATGGT 1980
|| |||||||||||||||||||||| ||||| || ||| ||| | | ||||||||||
Sbjct 2307 GAGCCGACATGTTGCATGGTGCAAATAATCCCGACTT-CCCGAAAGTCTTGATTGATGGT 2365
Query 1981 CCGTACGGCGCACCAGCTCAAGACTACAAGAAGTACGAGGTGGTTCTGCT-GATCGGTCT 2039
|| || || |||||||| ||||||||||||||||||||||||||||| || | | |||||
Sbjct 2366 CCATATGGTGCACCAGCACAAGACTACAAGAAGTACGAGGTGGTTCTACTAGTT-GGTCT 2424
Query 2040 TGGCATTGGAGCCACCCCGATGATCAGCATTATCAAGGACATTATCAACAATA-CGGAGA 2098
|| ||||||||||| || |||||||| || |||| |||||| | || || | | ||
Sbjct 2425 CGGGATTGGAGCCACACCAATGATCAGTATCGTCAAAGACATTGTTAATAACATCA-AGG 2483
Query 2099 CCAAGGAGCA-GCTCAGCCAAATGGAGAAGGGGGCTCCA-CA-G-GAGC-A-A-C-AAGT 2150
||||||| || || || | ||| || | || | | | || | || | | | | ||||
Sbjct 2484 CCAAGGAACAAGCCCAACTAAACCGA-ATGGAGAATGGAACAAGCGAACCACAACGAAGT 2542
Query 2151 TAAGAAAGAAACTTTCAAGACGCGAAGGGCTTACTTCTACTGGGTAACAAAG-GAGCAGG 2209
|||||||| | ||||| ||| || || ||||||||||| ||||| || | ||||| |
Sbjct 2543 -AAGAAAGAGAGTTTCAGGACCCGTAGAGCTTACTTCTATTGGGTTACGC-GTGAGCAAG 2600
Query 2210 G-TACATTT-GATTGGTTCAAGAACGTCATGAACGAGATT-GCAGAACGAGA--CAAAA- 2263
| | | ||| ||||||||||||||| | |||||||| | | || |||||||| | ||
Sbjct 2601 GCT-C-TTTCGATTGGTTCAAGAACATAATGAACGA-AGTCGCGGAACGAGATGCCAACC 2657
Query 2264 GCAAAGTCATAGAACTACACAA-TCATTGCACTAGTGTCTACGAAGAAGGAGACGTTCGT 2322
|| ||||| ||| | || || | |||| || |||||||| |||||||| |||| ||||
Sbjct 2658 GC---GTCATCGAAATGCATAACT-ATTGTACAAGTGTCTATGAAGAAGGTGACGCTCGT 2713
Query 2323 TCCGCACTCATACGGATGCTTCAGTCTCTAAATTATGCCAAGAATGGTTTAGACATTGT- 2381
|||||||| |||| |||||||| || ||||| |||| ||||| || | ||||||||
Sbjct 2714 TCCGCACTTATACATATGCTTCAATCACTAAACCATGCAAAGAACGGCGTCGACATTGTC 2773
Query 2382 TGCTGGGACAAGGGTCATGTCCCATTTCGCCAGACCTAATTGGAAAAACGTTTACAAACA 2441
| |||| ||||| || |||||||||||||| | ||||||||||| ||| |||||||| |
Sbjct 2774 T-CTGGAACAAGAGTTATGTCCCATTTCGCTAAACCTAATTGGAGAAATGTTTACAAGC- 2831
Query 2442 G-ATTGCCATGGATCACCCTGGTGCTAATGTTGGAGTGTTCTATTGTGGAGCACCGGTAT 2500
| || || |||||||| ||| | || ||||||||||| || ||||||||||| | ||
Sbjct 2832 GTATAGCTATGGATCATCCTAACACCAAAGTTGGAGTGTTTTACTGTGGAGCACCAGCAT 2891
Query 2501 TGACGAAGGAGTTAAGGCATCTAGCTTTGGAATTCACACACAAGACAAGTACTAGATTCT 2560
|||| |||||| |||||||||||||||| || ||||| ||||| ||||| || |||||||
Sbjct 2892 TGACAAAGGAGCTAAGGCATCTAGCTTTAGATTTCACCCACAAAACAAGCACCAGATTCT 2951
Query 2561 CTTTCCACAAAGAGAACTTCTAAAG-ACA 2588
| |||||||||||||| |||||||| |||
Sbjct 2952 CCTTCCACAAAGAGAATTTCTAAAGGACA 2980
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134246739468
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5