BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492333 Length=725 Score E Sequences producing significant alignments: (Bits) Value AT4G25040.1 | Symbols: | Uncharacterised protein family (UPF04... 1160 0.0 > AT4G25040.1 | Symbols: | Uncharacterised protein family (UPF0497) | chr4:12868174-12869457 FORWARD LENGTH=797 Length=797 Score = 1160 bits (628), Expect = 0.0 Identities = 696/728 (96%), Gaps = 7/728 (1%) Strand=Plus/Plus Query 1 CCCACTTCTTTCCTCTTTCTCTTGTCTCCGTGGAGTTTT-GGAATCTTACACAACAATAT 59 ||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 4 CCCACTTCTTTTCTCTTTCTCTTGTCTTCGTGGAGTTTTCGG-ATCTTACACAACAATAT 62 Query 60 CTTTGTCTTTACTGCATTT-TTGGTCCTTTGTCTTCTTACCTTTCTAACAATTATTAAGA 118 ||||||| |||||| |||| || ||||||| ||||||||||||||||||||||||||||| Sbjct 63 CTTTGTC-TTACTGTATTTCTT-GTCCTTTTTCTTCTTACCTTTCTAACAATTATTAAGA 120 Query 119 AAAGTAAAGCTTGAATTTAAATAAAAATGATGGGAGACAATGAAGGAAGAAGAACGCCGC 178 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 121 AGAGTAAAGCTTGAATTTAAATAAAAATGATGGGAGACAATGAAGGAAGAAGAACTCCGT 180 Query 179 TATTGAATCTTGGGGTTCAAGTGTCGATGAGAGTGTTAATCATCGGAGCTGCAATGGCCT 238 |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 181 TATTGAATCTTGGGGTTCAAGTATCGATGAGAGTGTTAACCATCGGAGCTGCAATGGCCT 240 Query 239 CGATGTGGGTCATGATCACTAACCGTGAAGTCGCCTCTGTTTATGGCATCGCTTTTGAGG 298 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 241 CGATGTGGGTCATGATCACTAACCGTGAAGTCGCATCTGTTTATGGCATCGCTTTTGAGG 300 Query 299 CTAAATACAGCTACTCCTCTGCCTTTAGGTATTTGGTGTACGCACAGATAGCTGTCTGCG 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CTAAATACAGCTACTCCTCTGCCTTTAGGTATTTGGTGTACGCACAGATAGCTGTCTGCG 360 Query 359 CCGCGACATTGTTTAC-CTTGGTATGGGCTTGTTTAGCAGTCCGCAGAAGAGGACTTGTT 417 |||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||| Sbjct 361 CCGCGACATTGTTTACGCTTG-TATGGGCTTGTTTGGCAGTCCGCAGAAGAGGACTTGTT 419 Query 418 TTTGCACTCTTCTTCTTTGATTTGCTTACGACTTTGACGGCGATATCTGCTTTCTCTGCG 477 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 420 TTTGCACTCTTCTTCTTTGATTTGCTTACGACTTTGACGGCGATATCAGCTTTCTCTGCT 479 Query 478 GCCTTCGCGGAAGGTTACGTTGGGAAGTACGGTAACAAACAAGCCGGTTGGCTTCCGATC 537 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 480 GCCTTCGCGGAAGGTTACGTAGGGAAGTACGGTAACAAACAGGCCGGTTGGCTTCCGATC 539 Query 538 TGCGGTTATGTGCATGTTTATTGCAGTCGTGTCACCATCTCACTCGCTATGTCCTTCGCC 597 |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||| Sbjct 540 TGCGGTTATGTGCATGGTTATTGCAGTCGTGTCACTATCTCCCTCGCTATGTCCTTCGCC 599 Query 598 TCTTTTGTCCTCTTGTTCATCCTTACGGTCTTAACTGCCTCCTCTGCTCGTCATTACTGA 657 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 600 TCTTTTATCCTCTTGTTCATCCTTACGGTCTTAACTGCCTCCGCTGCTCGTCATTACTGA 659 Query 658 TTTTCTTACATTTAATATCATACTATACAATTCCTTCTACTCTAAGATCATTCAGTCTTT 717 ||||||||||||| ||||||||| || ||||||||||||||| ||||| ||||||||||| Sbjct 660 TTTTCTTACATTTTATATCATACAATTCAATTCCTTCTACTCCAAGATAATTCAGTCTTT 719 Query 718 GTTATATA 725 |||||||| Sbjct 720 GTTATATA 727 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35163902900 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5