BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492349
Length=1884
Score E
Sequences producing significant alignments: (Bits) Value
AT4G24890.1 | Symbols: ATPAP24, PAP24 | purple acid phosphatase... 3033 0.0
AT5G50400.1 | Symbols: ATPAP27, PAP27 | purple acid phosphatase... 1482 0.0
> AT4G24890.1 | Symbols: ATPAP24, PAP24 | purple acid phosphatase
24 | chr4:12811479-12814449 REVERSE LENGTH=1888
Length=1888
Score = 3033 bits (1642), Expect = 0.0
Identities = 1804/1884 (96%), Gaps = 3/1884 (0%)
Strand=Plus/Plus
Query 1 AAAATTATGGGTAGAGGTATAGTTGTGCTTCTGTGTTTACTCGCACTCTTCAGCTCGAGC 60
|||| ||||| ||||| | ||| |||||||||||||||||||||||| ||||||||||||
Sbjct 4 AAAAATATGGCTAGAGTTTTAGGTGTGCTTCTGTGTTTACTCGCACTGTTCAGCTCGAGC 63
Query 61 TTATGTTTGGATCATGCCAATGGTCGTGGAGATCAAGCACTGGCTCAGATTAATATTTAC 120
||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||
Sbjct 64 TTATGTTTGGATCATGCCAATGGTCGTGGAGATCAAGCACTTGCTCAAATTAATGTTTAC 123
Query 121 GAAACAAGTCTTGCTTTGGATACTTCTGTCAAACTTCACGCTTCCCCTCAAGTTCTTGGT 180
||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||
Sbjct 124 GAAACAAGTCTTGCTTTAGATAGTTCTGTCAAACTTCACGCTTCGCCTCAAGTTCTTGGT 183
Query 181 TCTCAGGGTGAAGATACTGAATGGGTAGATCTTGCTATCTCCAACCCCAAGCCCTCTTCA 240
|| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct 184 TCCCAGGGTGAAGATACAGAATGGGTAAATCTTGCTATCTCCAACCCCAAGCCCACTTCA 243
Query 241 GACGATTGGATAGGAGTTTTCTCTCCAGCAAAATTCGACTCGGGTAACTGTTGGCCAACA 300
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 244 GATGATTGGATAGGAGTTTTCTCTCCAGCAAAATTCGATTCGGGTAACTGTTGGCCAACA 303
Query 301 ACTGGTGGCAAAGAGAAAACTCCTTACATATGTTCATCTCCCATCAAGTACATGTATTGT 360
| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 304 AGTGGTGGCAAAGAGAAAACTCCTTACATATGCTCTTCTCCCATCAAGTACATGTATTGT 363
Query 361 AACTCTCACCCAGACTATATGAAGTCCGGGAATGTGATTCTCAAGTTCCAGATTATAAAT 420
|| ||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 364 AATTCTCATCCAGATTACATGAAGTCCGGGAATGTGACTCTCAAGTTCCAGATTATAAAT 423
Query 421 CAGAGAGCTGATATCTCTTTTGCACTGTTTTCCAGTGGGGTCCAAGAGCCACACCTTCTC 480
|||||||||||| |||| |||||||||||||||| ||| || ||||||||||||||||||
Sbjct 424 CAGAGAGCTGATGTCTCCTTTGCACTGTTTTCCAATGGAGTTCAAGAGCCACACCTTCTC 483
Query 481 GGTGTTTCGAATCCTGTAGCTTTCGTCAATCCTAAAGCACCCCTATACCCACGTCTTGCA 540
|| ||||||||||||||||||||| |||||||||||||||| | || || |||||||||
Sbjct 484 GGGGTTTCGAATCCTGTAGCTTTCTTCAATCCTAAAGCACCTGTCTATCCGCGTCTTGCA 543
Query 541 TTAGGGAAGAATTGGGACGAAATGACCGTGACATGGACTAGTGGTTACAACATAGATGAG 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 544 TTAGGGAAGAATTGGGACGAAATGACCGTGACATGGACTAGTGGGTACAACATAGATGAG 603
Query 601 GCTGTTCCATTCATTGAATGGAGTGCAAAGGGACTTCCAGCTAGAAGATCACCAGCTGGA 660
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 GCTGTTCCTTTCATTGAATGGAGTGCAAAGGGACTTCCAGCTAGAAGATCACCAGCTGGA 663
Query 661 ACATTGACCTTTAACAGAAACAGCATGTGTGGTAATCCTGCTCGCGGCGTTGGTTGGCGT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 ACATTGACCTTTAACAGAAACAGCATGTGTGGTAATCCTGCTCGCGGCGTTGGTTGGCGT 723
Query 721 GATCCTGGTTTCTTCCATACTTCTTTCTTGAAAGAACTTTGGCCAAACCGCGAATACACA 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 724 GATCCTGGTTTCTTCCATACTTCTTTCTTGAAAGAACTTTGGCCAAACCGCGAATACATA 783
Query 781 TACAGGCTAGGCCATGACTTGGTCAATGGTTCGACAATTTGGAGCAAGAATTACACCTTT 840
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 784 TACAGGCTAGGCCATGACTTGGTCAATGGTTCCACAATTTGGAGCAAGAATTACACCTTT 843
Query 841 GTGTCCTCTCCTTATCCTGGACAAGACTCGAAACAACGGGTCATAATATTCGGTGACATG 900
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 844 GTGTCCTCTCCTTATCCTGGACAAGACTCGAAACAACGGGTCATAATATTTGGTGACATG 903
Query 901 GGAAAGGGTGAACGAGATGGCTCGAATGAGTACAATGATTACCAGCCTGGTTCCCTCAAC 960
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 GGAAAGGGTGAGCGAGATGGCTCGAATGAGTACAATGATTACCAGCCTGGTTCCCTCAAC 963
Query 961 ACAACAGACCAAGTCATCAAGGACTTGAAGGACATTGACATTGTTTTCCACATTGGAGAT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 ACAACAGACCAAGTCATCAAGGACTTGAAGGACATTGACATTGTTTTCCACATTGGAGAT 1023
Query 1021 CTCACTTATTCCAATGGGTATCTCTCCCAGTGGGATCAGTTCACAGCTCAAGTCGAGCCC 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1024 CTCACTTATTCCAATGGGTATCTCTCCCAGTGGGATCAGTTCACAGCTCAAGTCCAGCCC 1083
Query 1081 ATTGCTTCTACTGTCCCCTACATGATAGCCAGTGGCAACCACGAGCGTGATTGGCCAGAC 1140
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1084 ATTGCTTCTACTGTACCCTACATGATCGCCAGTGGCAACCATGAGCGTGATTGGCCAGAC 1143
Query 1141 ACTGGATCTTTCTATGCCGGTACAGACTCTGGAGGAGAGTGTGGTGTTCCTGCAGAGACC 1200
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1144 ACTGGATCTTTTTATGCCGGTACAGACTCCGGAGGAGAGTGTGGTGTTCCTGCAGAGACC 1203
Query 1201 ATGTTCTACTTTCCTGCTGAGAACAGAGCTAAATTCTGGTACAGAACAGATTACGGAATG 1260
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1204 ATGTTCTACTTTCCTGCTGAGAACAGAGCTAAATTCTGGTACAAAACAGATTATGGAATG 1263
Query 1261 TTCCGCTTTTGTGTAGCAGACAGTGAACACGATTGGAGAGAAGGAACAGAGCAATACAAA 1320
|| ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1264 TTTCGCTTCTGTGTAGCAGACAGTGAACACGATTGGAGAGAAGGCACGGAGCAATACAAA 1323
Query 1321 TTCATCGAGAATTGCCTTGCCACTGTTGATAGAAAGACTCAGCCTTGGCTCATTTTTATA 1380
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 TTCATTGAGAATTGTCTTGCCACTGTTGATAGAAAGACTCAGCCTTGGCTCATTTTTATA 1383
Query 1381 GCTCACCGTGTCCTTGGTTATTCCACCAATGATTGGTATGGCAAAGAAGGAACCTTTGAA 1440
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1384 GCTCATCGTGTCCTTGGTTATTCCACCAATGATTGGTATGGCAAAGAAGGAACCTTTGAA 1443
Query 1441 GAGCCTATGGGAAGAGAAAGCCTACAGAAACTGTGGCAGAAGTACAAAGTTGACCTTGCT 1500
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1444 GAGCCTATGGGAAGAGAAAGCCTACAAAAACTGTGGCAGAAGTACAAAGTAGACCTTGCT 1503
Query 1501 TTCTACGGCCATGTCCATAACTATGAGCGAACCTGCCCCATTTACGAGAGCCAATGTGTG 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1504 TTCTACGGCCATGTCCATAACTATGAGCGAACCTGCCCCATTTACGAGAGCCAATGTGTG 1563
Query 1561 AACAATGATAAGGATCACTACTCAGGGACCTTCAAAGGAACCATCCACGTTGTTGTTGGT 1620
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1564 AACAATGATAAGGATCACTACTCAGGGACCTTTAAAGGAACCATCCATGTTGTTGTTGGT 1623
Query 1621 GGTGCAGGAAGTCACTTGTCTCCGTTCAGCTCACTGGTACCCAACTGGAGTTTGGTCAGA 1680
||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||
Sbjct 1624 GGTGCAGGAAGTCACTTGTCTCCCTTTAGCTCACTTGTACCCAAATGGAGTTTGGTCAGA 1683
Query 1681 GATTATGACTTTGGGTTTGTGAAGTTGACTGCTTCTGATCACTCATCACTTCTCTTTGAG 1740
|| || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1684 GACTACGACTTTGGGTTTGTGAAGTTGACTGCTTCCGATCACTCATCACTGCTCTTTGAG 1743
Query 1741 TATAAGAAGAGCAGCACTGGCCAAGTGTATGACTCCTTCAACATCTCTAGAGATTACAGA 1800
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1744 TACAAGAAGAGCAGCACTGGCCAAGTGTATGACTCCTTCAACATCTCTAGAGATTACAGA 1803
Query 1801 GATGTTTTGGCTTGCACTCATGATAGCTGCGAGCCCACCACATCAGCTTCATGATCtttt 1860
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||
Sbjct 1804 GATGTTTTGGCTTGCACTCACGATAGCTGCGAGCCCACCACATCAGCTGGATGAT-TTTT 1862
Query 1861 ttttttATTACATAGTTTTCCTTC 1884
|| | ||||||| ||||||||||
Sbjct 1863 TTGT--ATTACATTGTTTTCCTTC 1884
> AT5G50400.1 | Symbols: ATPAP27, PAP27 | purple acid phosphatase
27 | chr5:20523575-20526469 REVERSE LENGTH=2074
Length=2074
Score = 1482 bits (802), Expect = 0.0
Identities = 1487/1811 (82%), Gaps = 73/1811 (4%)
Strand=Plus/Plus
Query 79 AATGGTCGTGGAGATCAAGCACTGGCTCAGATTAATATTTACGAAACAAGTCTT-GCTTT 137
||||| |||||||||||||||||| |||| ||| |||| |||| | || | || |||
Sbjct 302 AATGGACGTGGAGATCAAGCACTGTCTCAAATTGATATATACGCCATAAAT-TTAGCTCA 360
Query 138 GGAT-ACTTCTG-TCAAACTTCACGCTTCCCCTCAAGTTCTTGGTTCTCAGGGTGAAGAT 195
| || || |||| | | |||||| |||||||| ||||||||||| |||||| | ||
Sbjct 361 GCATCAC-TCTGCTTTTA-TTCACGTTTCCCCTCTTGTTCTTGGTTCCCAGGGTCAGGAC 418
Query 196 ACTGAATGGGTAGATCTTGCTATCTCCAACCCCAAGCCCTCTTCAGACGATTGGATAGGA 255
|| ||||||||| || ||| |||||| || || |||| ||||||||||||||| | |||
Sbjct 419 ACAGAATGGGTAAATGTTGTTATCTCAAATCCGGAGCCTTCTTCAGACGATTGGGTTGGA 478
Query 256 GTTTTCTCTCCAGCAAAATTCGACTCGGGTAAC-TGTTG-GCCAACAACTGGTGGCAAAG 313
|| ||||| ||||||||||||||||| | | | ||| | | |||| | || |||||
Sbjct 479 GTCTTCTCACCAGCAAAATTCGACTC----ATCTTCTTGTG-CTCCAACAGATGACAAAG 533
Query 314 AGAAAACTCCTTACATATGTTCATCTCCCA-TCAAGTACATGTATTG-TAACTCTCA-CC 370
||| | |||||| || || ||| || ||| ||||||| ||||| || || || || |
Sbjct 534 AGATAGCTCCTTTTATTTGCTCAGCT-CCAGTCAAGTATATGTA-TGCCAAGTC-CAGTC 590
Query 371 CAGACTATATGAAGTCCGGGAATGTGATTCTCAAGTTCCA-GATTATAAATCAGAGAGCT 429
| |||||||||||| | ||||||| | || | ||||| || | ||||||| |||||||||
Sbjct 591 CTGACTATATGAAGACTGGGAATGCGGTTTTGAAGTT-CATGCTTATAAACCAGAGAGCT 649
Query 430 GATATCTCTTTTGCACTGTTTTCCAGT-GGGG--TC-CAAGAGCC-ACACCT-TCTCGGT 483
||| |||| ||||| | | || || | |||| || ||| | || |||| | |||| |
Sbjct 650 GATTTCTCCTTTGC-C-CTCTT-CACTGGGGGACTCTCAA-ATCCAACACTTGTCTC-G- 703
Query 484 GTTTCGAATCCTGTAGC-TTTCGTCAATCCTAAAGCACCCCTATACCCACGTCTTGCATT 542
||||| |||| |||| | ||| ||||||||||||| || | || ||||||||||| ||
Sbjct 704 GTTTCAAATCATGTATCGTTT-ATCAATCCTAAAGCTCCTGTCTATCCACGTCTTGCTTT 762
Query 543 AGGGAAGAATTGGGACGAAATGACCGTGACATGGACTAGTGGTTACAACATAGATGAGGC 602
||||||||| |||||||| |||||||| |||||||| |||||||||||||||| ||||||
Sbjct 763 AGGGAAGAAATGGGACGAGATGACCGTAACATGGACAAGTGGTTACAACATAGGTGAGGC 822
Query 603 TGTTCCATTCATTGAATGGAGTGC-AAAGGG-ACTTC-CAGCTAGAAGATCACCAGCTGG 659
|||||| || | ||||||||| | ||||| || || || |||| |||| ||||||||
Sbjct 823 TGTTCCGTTTGTGGAATGGAGT-CGTAAGGGAAC-TCGAAG-TAGACGATCGCCAGCTGG 879
Query 660 AACATTGACCTTTAACAGAAACAGCATGTGTGGTAATCCTGCTCGCGGC-GTTGGTTGGC 718
|| ||||| |||| ||| ||||||||||||||| ||||||||| | ||||||||||
Sbjct 880 TACCTTGACTTTTACCAGGAACAGCATGTGTGGTGCTCCTGCTCG-TACTGTTGGTTGGC 938
Query 719 GTGATCCTGGTTTCTTCCATACTTCTTTC-TTGAAAGAACTTTGGCCAAACCGCGAA-TA 776
||||||| |||||| |||| ||| | ||| |||||||| ||||||||||||| | || ||
Sbjct 939 GTGATCCAGGTTTCATCCACACTGC-TTCATTGAAAGATCTTTGGCCAAACCTC-AAGTA 996
Query 777 CACATACAGGCTAGGCCATGACTTGGTCAATGGTTCGACAATTTGGAGCAAGAATTACAC 836
|||||||||| | || ||||| ||| | ||||| || | | ||||||||||||||| ||
Sbjct 997 CACATACAGGATGGGTCATGAGTTGATGAATGGATCAATAGTTTGGAGCAAGAATTTCA- 1055
Query 837 CTTT-GTGTCCTCTCCTTATCCTGGACAAGACTCGAAACAACGGGTCATAATATTCGGTG 895
|||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| |
Sbjct 1056 CTTTCAAGTCCTCTCCTTATCCTGGACAAGACTCGTTACAACGGGTCATAATCTTCGGGG 1115
Query 896 ACATGGGAAAGGGTGAACGAGATGGCTCGAATGAGTACAATGATTACCAGCCTGGTTCCC 955
||||||| ||||| || || ||||| || || |||||||||||||| ||||||||||| |
Sbjct 1116 ACATGGGGAAGGGAGAGCGGGATGGTTCAAACGAGTACAATGATTATCAGCCTGGTTCTC 1175
Query 956 TCAACACAACAGACCAAGTCATCAAGGACTTGAAGGACATTGACATTGTTTTCCACATTG 1015
||||||| || || ||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1176 TCAACACCACTGATCAACTCATCAAGGACTTGAAGAACATTGACATTGTTTTCCACATTG 1235
Query 1016 GAGATCTCACTTATTCCAATGGGTATC-TCTCCCAGTGGGATCAGTTCACAGCTCAAGTC 1074
||||| ||||||| | ||||| || | |||| ||||||||||||||||||||||||||
Sbjct 1236 GAGATATCACTTACGCAAATGGTTA-CATCTCGCAGTGGGATCAGTTCACAGCTCAAGTT 1294
Query 1075 GAGCCCATTGCTTCTACTGTCCCCTACATGATAGCCAGTGGCAACCACGAGCGTGATTGG 1134
|| || |||||||||||||| || |||||| | || ||||||||||||||||| ||||||
Sbjct 1295 GAACCTATTGCTTCTACTGTTCCATACATGGTCGCAAGTGGCAACCACGAGCGGGATTGG 1354
Query 1135 CCAGACACTGGATCTTTCTATGCCGGTACAGACTCTGGAGGAGAGTGTGGTGTTCCTGCA 1194
|||||| ||||||| ||||||| |||| |||||||||||| |||||||| ||||||||
Sbjct 1355 CCAGACTCTGGATCCTTCTATGGTGGTAAAGACTCTGGAGGGGAGTGTGGGGTTCCTGCG 1414
Query 1195 GAGACCATGTTCT-ACTTTCCTGCTGAGAACAGAGCTAAATTCTGGTACAGAACAGATTA 1253
|| |||||||| | | |||||||||||||||| |||||| ||||||||| | |||||
Sbjct 1415 GAAACCATGTT-TGATTTTCCTGCTGAGAACAAAGCTAAGTTCTGGTACTCTGCGGATTA 1473
Query 1254 CGGAATGTTCCGCTTTTGTGTAGCAGACAGTGAACACGATTGGAGAGAAGGAACAGAGCA 1313
|||||||| || || |||||||| |||| |||||| |||||||||||||| |||||||
Sbjct 1474 TGGAATGTTTCGGTTCTGTGTAGCGGACACTGAACATGATTGGAGAGAAGGGTCAGAGCA 1533
Query 1314 ATACAAATTCATCGAGAATTGCCTTGCCACTGTTGATAGAAAGACTCAGCCTTGGCTCAT 1373
|||| ||||||| ||| ||| |||||| |||| || |||| | ||||||||||| | ||
Sbjct 1534 ATACCAATTCATAGAGCGTTGTCTTGCCTCTGTAGACAGAAGGGCTCAGCCTTGGTTGAT 1593
Query 1374 TTTTATAGCTCACCGTGTCCTTGGTTATTCCACCAATGATTGGTATGG-CAAAGAAGGAA 1432
|||||| ||||| ||||| || |||||||| || || ||||||||||| | |||||||
Sbjct 1594 TTTTATTGCTCATCGTGTTCTCGGTTATTCAACAAACGATTGGTATGGTC-AAGAAGGTT 1652
Query 1433 CCTTTGAAGAGCCTATGGGAAGAGAAAGCCTACAGAAA-CTGTGGCAGAAGTACAAAGTT 1491
|||||||||| |||||||||||||| ||| | || ||| || ||||||||||| |||||
Sbjct 1653 CCTTTGAAGAACCTATGGGAAGAGAGAGCTTGCA-AAAGCTCTGGCAGAAGTATAAAGTA 1711
Query 1492 GACCTTGCTTTCTACGGCCATGTCCATAACTATGAGCGAACCTGCCCCATTTACGAGAGC 1551
||| | || |||||||| ||||| ||||||||||| |||| |||||||||||| ||| |
Sbjct 1712 GACATCGCGTTCTACGGTCATGTTCATAACTATGAAAGAACATGCCCCATTTACCAGAAC 1771
Query 1552 CAATGTGTGAACAATGA-TAAGGATCACTACTCAGGGA-CCTTCAAAGGAACCATCCACG 1609
|||||| || ||||||| || | |||||||||| ||| ||||||||||||| || ||||
Sbjct 1772 CAATGTATGGACAATGAGAAAAG-TCACTACTCA-GGAGCCTTCAAAGGAACTATACACG 1829
Query 1610 TTGTTGTTGGTGGTGCAGGAAGTCACTTGTCTCCGTTCAGCTCACTGGTACCCAACTGGA 1669
| |||||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||
Sbjct 1830 TGGTTGTTGGTGGTGCAGGAAGTCACTTGTCTTCGTTCAGCTCGCTGAAACCCAAGTGGA 1889
Query 1670 GTTTGGTCAGAGATTATGACTTT-GGGTTTGTGAAGTTGACTGCTTCTGATCACTCATCA 1728
|| | ||||||| ||||| || ||||||||||||||||| |||| ||||||||| ||
Sbjct 1890 GTATCTTCAGAGACTATGA-TTACGGGTTTGTGAAGTTGACGGCTTTTGATCACTCCTCT 1948
Query 1729 CTTCTCTTTGAGTATAAGAAGAGCAGCACTGGCCAAG-TGTA--TGACTCCTTCAAC-AT 1784
|||||||| || || ||||| ||||||| ||| | | |||| ||||||||||| | ||
Sbjct 1949 CTTCTCTTCGAATACAAGAAAAGCAGCAATGG--A-GCTGTACATGACTCCTTCA-CTAT 2004
Query 1785 CTCTAGAGATTACAGAGATGTTTTGGCTTGCACTC-ATGATAGCTGCGAGCCCACCACAT 1843
|| |||||| ||||||||||| |||||||| || | |||||||||||||| |||||||
Sbjct 2005 CTTTAGAGAATACAGAGATGTCTTGGCTTGTGTTCGA-GATAGCTGCGAGCCAACCACAT 2063
Query 1844 CAGCTTCATGA 1854
||||||||||
Sbjct 2064 TAGCTTCATGA 2074
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93272612610
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5