BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492386
Length=3684
Score E
Sequences producing significant alignments: (Bits) Value
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |... 5622 0.0
> AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16
| chr4:12679210-12684939 REVERSE LENGTH=3721
Length=3721
Score = 5622 bits (3044), Expect = 0.0
Identities = 3515/3733 (94%), Gaps = 70/3733 (2%)
Strand=Plus/Plus
Query 1 AAAAGCAAAGCGTCTTGGTTTAGAAAAGTAATATCCTCCTCTCCTATTTTCTTCCTCCTT 60
||||||||||||||||||| |||||||||||||| || | |||||| ||||||| |||||
Sbjct 1 AAAAGCAAAGCGTCTTGGTATAGAAAAGTAATATACTGC-CTCCTAATTTCTTCGTCCTT 59
Query 61 GTACCGAAGAATCTCTCCACTCTTGCCCTCTTTCGAAACCCTAAACCAGAAGCACCACCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 CTACCGAAGAATCTCTCCACTCTTGCCCTCTTTCGAAACCCTAAACCAGAAGCACCA--- 116
Query 121 GAATTTTTCAACTTTTTTC-AGAGAACAATAGAAAACCCAACTTGTGCTCTCGAGGGTTT 179
|| |||||||||||||| | |||||||||||||||||||||||||||||||| |||||||
Sbjct 117 GATTTTTTCAACTTTTTCCCAGAGAACAATAGAAAACCCAACTTGTGCTCTCTAGGGTTT 176
Query 180 TCTTTATTCCT-CTCATCTTTGGATTTTCGTGGGTCATCATTTTGGAAGCTTACCCACCA 238
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 177 TCTTTATTCCTTCTCATCTTTGGATTTTCTTGGGTCATCATTTTGGAAGCTTACCCACCA 236
Query 239 GCGAAACGAT-----CT-C--T-G------GG-TTCTCTCTCT-GC---------ATGTG 272
|||||| || || | | | || |||||||||| || |||||
Sbjct 237 GCGAAAAAATTATAACTTCCATCGATTCCTGGCTTCTCTCTCTCGCTCTCTCTGCATGTG 296
Query 273 CTAAATCGCCGGACTGATCCTCACTGTCACCTCTGTTCCCGGCTAATTCGCCGGTGAAAT 332
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 297 CTAAATCGCCGGACTGATCCTCACTGTCACCTCTGTTCCCGGCTTATTCGCCGGTGAAAT 356
Query 333 CTATGGTTGGTGGTCAGATTTATTTCCAATTGTTTGTGCATCTGGTGGAGGATAAATGCT 392
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 CTATGGTTGGTGCTCAGATTTATTTCCAATTGTTTGTGCATCTGGTGGAGGATAAATGCT 416
Query 393 CCTTGTTTTGGATCTAGGGATTTCTAGTCTAGTCCTTGTGATCTCTCTTGTTCTGCCTCT 452
|||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| |
Sbjct 417 CCTTGTTTTGGATCTAGGGATTTCTAGTCTAGTCCTTGTGGTCTCTCTTGTTTTACCTTT 476
Query 453 GATCGGCCTCTTTGTTCGTCACAAATGGAGGGTCGCTGCCCAAAGGAGGGAAGAGATTAG 512
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 477 GATCGGTCTCTTTGTTCGTCACAAATGGAGGGTCGCTGCCCAAAGAAGGGAGGAGATTAG 536
Query 513 GAGACTTCTTATTCATGCGTCTCAAGAGGCTGCTAGGGCTGAGCTAGAGGCCTCTGTTGA 572
||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||
Sbjct 537 AAGACTTCTTATTCATGCTTCTGAAGAGGCTGCCAGGGCTGAGCTAGAGGCCTCTGTTGA 596
Query 573 GTTCTCTTCTGTGGCCATCTCTAATGTCTTCCATTGTCCTGTGTGTTATTGTCTTGCCAC 632
|||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||
Sbjct 597 GTTCTCTTCTGTTGCCGTCTCTAATGTCTTCCATTGTCCTGTTTGCTATTGTCTTGCCAC 656
Query 633 GACTCGATGCTCTCGCTGCAAATCGGTTCGATATTGTTCGGGGAAATGTCAAATCATTCA 692
|||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||||||
Sbjct 657 GACTCGTTGCTCTCGCTGCAAAGCCGTTCGATATTGTTCCGGGAAATGTCAAATCATTCA 716
Query 693 CTGGCGGCAAGGTCACAAAGATGAATGTCGTCCTGCTTCCATTGTATATGATAGTGAAGA 752
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 717 CTGGCGGCAAGGTCACAAAGATGAATGTCATCCTGCTTCCATTGTATATGATAGTGAAGA 776
Query 753 TGAGAAAAGTGATTCTGATTTGAGATCCAG-AGAAGAAAATGAACGGAATACTCATGAGG 811
||||| ||||||| |||||||||| || ||||||||||| || ||||||| |||||
Sbjct 777 TGAGA---GTGATTCCGATTTGAGATT-AGGAGAAGAAAATGGACAAAATACTCCTGAGG 832
Query 812 AAACTTTACTGCTGGATCCAGAACCAGTTACTATACCAATTGGGGAAACAATATTATCTG 871
||||||||||| ||| |||||||||||||||||||||||| |||||| || ||||||||
Sbjct 833 AAACTTTACTGGTGGGTCCAGAACCAGTTACTATACCAATCGGGGAATCACTATTATCTA 892
Query 872 ATCCTGCCAGATCTCCTGAAGATGGGAATGGAGATATTGCAGATAACAAAGATGACCTCA 931
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 893 ATCGTGCCAGATCTCCTGAAGATGGGAATGGAGATATTGCAGATAACAAAGATGACCTTA 952
Query 932 TAGATAAGGAGGAAGCTGTTTCTGTTGCTGAAACATCTGGATCCTCGTTTTCTGGCTTCT 991
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 TAGATAAGGAAGAAGCTGTTTCTGTTGCTGAAACATCTGGATCCTCGTTTTCTGGCTTCT 1012
Query 992 CCTCCTCCCCCCGTAATGACTCTGGTGATGAGATTTCTCTTTGTGAGAGCTTTAGTTCAT 1051
||||||||||||||||||||||||| || |||||||||| |||||||||||| |||||||
Sbjct 1013 CCTCCTCCCCCCGTAATGACTCTGGCGACGAGATTTCTCGTTGTGAGAGCTTCAGTTCAT 1072
Query 1052 CTGAATCCGAGAGATCAGAGTCCCTACTTGATGCTCATGTCTCTGTAGAGCCAGAAGACA 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 CTGAATCCGAGAGATCAGAGTCCCTACTTGATGCTCATGTCTCTGTAGAGCCAGAAGACA 1132
Query 1112 CCTGTTTCAGCACCATCGATGATGCTCCATCCAAACTGTTGTCTCCTAAATTTGTGCACT 1171
|||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct 1133 CCTGTTTCAGCACCATTGAAGATGCTCCATCCAAACTGTTGTCTCCAAAATTTGTGCACT 1192
Query 1172 TGGTTGAATCTGTAGATAACCTCGCTAATCTGCCTAAATTAAGTGTACATAAGCCTGGGG 1231
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||
Sbjct 1193 TGGTTGAATCTGTAGATAATCTCGCTAATCTGCCTAAATTAAGTGTACATAAACCTGAGG 1252
Query 1232 GTGATGCTGGGCAGAACCAGAGCCAATCAAGGAGCTTACACTCATTAGTTACGGATAGGC 1291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 ATGATGCTGGGCAGAACCAGAGCCAATCAAGGAGCTTACACTCATTAGTTACGGATAGGC 1312
Query 1292 ATCCAGTATCCA-CTGACCCATCTCCTCTAAAGTCATCTGATTTTTGGGGTACGGCTCTT 1350
|||||||||| | |||||||||||| | || ||||||||||||||||||||||||||||
Sbjct 1313 ATCCAGTATC-AGCTGACCCATCTC-TG-AA-GTCATCTGATTTTTGGGGTACGGCTCTT 1368
Query 1351 GGATCAGCAGAACGTGTAAGTGAGTCTTGTGATAAATCTAAATCTGGTAGACCTGGTAAC 1410
|||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1369 GGATCAGCCGAACGTGTGAGTGATTCTTGTGTTAAATCTAAATCTGGTAGACCTGGTAAC 1428
Query 1411 TCCTCTCTGCATTTCTCCTTTGGCTC---CTC-T--AGAGACACCTCAGCTGCTAAAGTT 1464
|||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct 1429 TCCTCTCTGCATTTCTCCTTTGGCTCTGGCTCCTCTAGAGACACCTCAGCTGCTAAAGTT 1488
Query 1465 TCTGAGCACAAAAGGAGCATTTTAAAAGAAGCTCCTAGTG---CTGCATTAGGGA-CTGG 1520
|||||||| | || ||||||||||||||||||||||| | ||| ||| | |||
Sbjct 1489 TCTGAGCAGAGGAGTAGCATTTTAAAAGAAGCTCCTAGGGGGACTGG-TTATATATCTGA 1547
Query 1521 TA-A-TAATCTAAA-AGAAAGAAATGCTAAAATATTTGATGAAGCTGAAATTGCATTACC 1577
| | ||| || || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1548 TGGAGTAAACTTAAGAGAAAGAAATGCTAAAAGATTTGATGAAGCTGAAATTGCATTACC 1607
Query 1578 AACTTCCTCTTCTACTGATGCGCCGAGTCCTTTGGACACTTCTAATTTGCCCCATGTGAC 1637
|| |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||
Sbjct 1608 AATTTCCTCTTCTACTGATGCGCTGAGTCCTTTGGACTCTTCTAATTTGTCCCATGTGAC 1667
Query 1638 CCTTCAGAAGTTAAAGAGCGCCAGTAGTGAAAATGGCTGTATGTTGGCCCCTTTGAAGGT 1697
||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 1668 CCTTCCGAAGTCAAAGAGCGCTAGTAGTGAAAATGGCTCTATGTTGGCCCCTTTGAAGGT 1727
Query 1698 TGGGGAAGTCCAACTTTTGGCATCCAAGGCCTCGAATACCAAGGAGTGTGCTGATCTTAT 1757
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1728 TGGGGAAGTCCAACTTTTGGCATCCAAGGCCTCGAATACCAAGAAGTGTGCTGATCTTAT 1787
Query 1758 GAAACATTCTCCTCTAGGTGCAAAATCTGTAAGAGTTCTTGATCATCAGAAACAGAATGG 1817
||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1788 GAAGCATTCTCCTTTAGGTGCAAAATCGGTAAGAGTTCTTGATCATCAGAAACAGAATGG 1847
Query 1818 TGCTGCCGTTCACCGTATAAGTTCTCTACATGGAAGAAGTGGTTTGAAGGCATCAGTACT 1877
||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1848 TGCTGTCGTTCAGCATATAAATTCTCTACATGGAAGAAGTGGTTTAAAGGCATCAGTACT 1907
Query 1878 GAAAGTTGTAGACCAGTGGACTAGACCGAAGTCGGAAAATGAGATGGCAGGAAGACATGG 1937
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1908 GAAAGTTGTAGACCAGTGGACCAGACCGAAGTCTGAAAATGAGATGGCAGGAAGACATGG 1967
Query 1938 TCATAAGGGGCTCTTTCCATATGAAGTCTTTGCTAAGCTGTATACA-AGTAAAATTGAGT 1996
|||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||
Sbjct 1968 TCATAAGGGGCTCTTTCCATATGAAGTCTTTGCTAAACTGTATACATA-TAAAATTGAGT 2026
Query 1997 TCCAGCCTTGTGGCCTCATCAACGTTGGCAATAGCTGCTTTGCTAATGTTGTCTTCCAAT 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2027 TCCAGCCTTGTGGCCTCATCAACGTTGGCAATAGCTGCTTTGCTAATGTTGTCTTTCAAT 2086
Query 2057 GCCTGATGTTCACTCCTCCTCTGACGACATACTTCCTCCAGCAACTTCATTCTAGAGCAT 2116
|||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 2087 GCCTTATGTTCACTCCTCCTCTGACGACATACTTCCTCCAGCAATTTCATTCCAGAGCAT 2146
Query 2117 GTACaaaaaaaGAACAGTGCTTCACCTGTGGATTTGAGAAGCTGGTCTTGAAGGCAAAAG 2176
||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||
Sbjct 2147 GTACAAAAAAAGAACAGTGCTTCACCTGTGGGTTTGAGAAGCTGGTCGTAAAGGCAAAAG 2206
Query 2177 AAGGGAAGTCTCCACTGTCCCCTAATGGCTTGCTATCTCAGCTACAGAATATTGGAATCT 2236
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2207 AAGAGAAGTCTCCACTGTCCCCTAATGGCTTGCTATCTCAGCTGCAGAATATTGGAATCT 2266
Query 2237 TTCTTGGGAATGGCAAGGAAGAAGATGCACATGAATTCCTTAGGTTTGTTGTCGATACAC 2296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2267 TTCTTGGGAATGGCAAGGAAGAAGATGCACATGAATTCCTTAGGTTTGTTGTCGATACAA 2326
Query 2297 TGCAGTCCGTGTGCATTAAGGCATCTGAATATGATATGCCCAAGAGTAGCAAATTAGAAG 2356
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2327 TGCAGTCTGTGTGCATTAAGGCATCTGAATATGATATGACCAAGAGTAGCAAATTAGAAG 2386
Query 2357 ATACAACTCTTATTGGTTTGACATTTGGGGGATACCTCCGATCAAAGATTAAATGCATGA 2416
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2387 ATACAACTCTTATTGGTTTGACATTTGGGGGATACCTCCGGTCAAAGATTAAATGCATGA 2446
Query 2417 AATGTCAAGTAAAATCTGAGCTGCGTGAGAAAATGATGGATCTAACGGTTGAGATTGATG 2476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2447 AATGTCAAGTAAAATCTGAGCTGCGTGAGAAAATGATGGATCTAACGGTTGAGATTGATG 2506
Query 2477 GAGATATTAGCACCCTGGATGATGCTTTGCGTCGATTTACAAGGACTGAGATATTGGATG 2536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2507 GAGATATTAGCACCCTGGATGATGCTTTGCGTCGATTTACAAGGACTGAGATATTGGATG 2566
Query 2537 GAGACAACAAATACAGATGTGGCAGCTGTAAATCCTATGAGAGAGCCAAAAAGAAGCTGA 2596
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2567 GAGAGAACAAATACAGATGTGGCAGCTGTAAATCCTATGAGAGAGCCAAAAAGAAGCTGA 2626
Query 2597 AAATTACAGAACCTCCGAATGTCCTTACCATTGCACTAAAACGATTCCAGGCAGGGAAAT 2656
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2627 AAATAACAGAGCCTCCGAATGTCCTTACCATTGCACTAAAACGATTCCAGGCAGGGAAAT 2686
Query 2657 TCGGGAAGCTCAATAAGTTGATCAGGTTTCCAGAAACTCTAGATTTGGCTCCATATGTCA 2716
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2687 TCGGGAAGCTCAATAAGTTGATTAGGTTTCCAGAAACTCTAGATTTGGCTCCATATGTCA 2746
Query 2717 GCGGGGGAAGTGAAAAATCACATGACTACAAACTCTATGGAGTTATTGTTCACTTGGATA 2776
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2747 GTGGGGGAAGTGAAAAATCACATGACTACAAACTCTATGGAGTTATTGTTCACTTGGATG 2806
Query 2777 TAATGAATGCAGCATTTTCTGGCCACTATGTCTGCTATATTAGAAATCAAAATAAGTGGT 2836
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 2807 TAATGAATGCAGCATTTTCTGGCCATTATGTCTGCTATATTAGAAACCAAAATAAGTGGT 2866
Query 2837 ACAAGGCTGATGATAGCACGGTAGTAACTTCGGATGTTGAAAGGATCTTGACAAAGGGAG 2896
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2867 ACAAGGCTGATGATAGCACGGTAGTAACTTCGGATGTGGAAAGGATCTTGACAAAGGGAG 2926
Query 2897 CGTATATGTTGTTCTACGCAAGGTGCACTCCAATGCCTCCAAAATTAGCAGTATGTACCA 2956
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 2927 CGTATATGTTGTTCTACGCAAGGTGCACTCCAACGCCTCCAAGATTAGCAGTATGTACCA 2986
Query 2957 AAACTGAAGCATCCAACAAAAGAAGCAGAGTGCCAGTACCTAAGGCTAAAGAGAAAAGTA 3016
|||||||||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||
Sbjct 2987 AAACTGAAGCATCCAATAAAAAAAGCAGAGTGCCACTACCTAAGGCTAATGAGAAAAGTA 3046
Query 3017 CCATATCCATGTCACGGTCTGTGTCTACTTCAAGTCCTGTTTTGTCTTCCAACACGCCCG 3076
|||||||| | |||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 3047 CCATATCC----C--GGTCTGTGTCTACTTCAAGTCCTGAGTTGTCTTCCAACACGCCTG 3100
Query 3077 GTGGT---CGATCTGGCAATATACAGTCATTTTATTCCAGTTTCCAGAGGCTGCAGAAAA 3133
||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 3101 GTGGTGGTCGATCCGGCAATATACAGTCATTTTATTCTAGTTTCCAGAGGCTGCAGAAGA 3160
Query 3134 TTTTAGAAGATGACTCGGCGAGTGACAGTTCATCTCTCTTTGACAGCAACTCAGATGAAT 3193
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3161 TTTTAGAAGAAGACTCGGCGAGTGACAGTTCATCTCTCTTTGACAGCAACTCAGATGAAT 3220
Query 3194 GCTCTTGTAGCACAGACAGTACAAGCATGGACGACTTTGCTGATTTCATTTTTGGAGATC 3253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3221 GCTCTTGTAGCACAGACAGTACAAGCATGGACGACTTTGCTGATTTCATTTTTGGAGATC 3280
Query 3254 ATCAGGGACGGGCCCACGGACAGTCTGAGGCTCCCTCACCAACATCATCGTCTTCCTCGT 3313
||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 3281 ATCAGGGACGGGCTCACGGACAGTCTGAGACTCCCTCACCAACATCATCGTCTTCCTCAT 3340
Query 3314 CTTCTCCTCCCTTCACAAGGCATTCGCCGCTCAGTCGTTCATCTCTAGAAACTTACGGAA 3373
||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||
Sbjct 3341 CTTCTCCCCCCTTCACAAGGCGTTCGCCGCTCAGTCGTTCTTCTCCAGAAACTTACGGAA 3400
Query 3374 CCTCAAGACATCAGTTGCCCTTGGGAGGAGAAAGGTAAGGGAAACAACGATGGTTTTTTG 3433
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3401 CCTCAAGACATCAGTTGCCCTTGGGAGGAGAAAGGTAAGGGAAACAA-GATGGTTTTTTG 3459
Query 3434 TCCACT-GGCCCCAACTAAGTCAAAT-TAGTAGAAGAAAGTAGATTTGATTACATGTAGA 3491
|||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 3460 TCCACTTGGCCCCAACTAAGTCAAAAGTAGTAGAAGAAAGTAGATTTGATTACACGTAGA 3519
Query 3492 TGGAGTGGTTTTATTAACAACCCGTATTTAGGCTTGGTGAAAGTGGTTAACGAGAGAACT 3551
| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 3520 TTGAGTGGTTTTATTAACAACCCGTATTTAGGCTTGGTGAAAGTGGTTAATGAGAGAAGT 3579
Query 3552 GGTGGTATATAGTAGTGTATAGTGGGGAAGAGAGATTTTGCCCATGAAATTGTATCACGT 3611
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3580 GGTGGTATATAGTAGTGTATAGTGGGGAAGAGAGTTTTTGCCCATGAAATTGTATCACGT 3639
Query 3612 AATGGAACGGAATTTACCTTTGTTAATAAGTTGTTTTGACTTTTATTATAATCAATCAAT 3671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3640 AATGGAACGGAATTTACCTTTGTTAATAAGTTGTTTTGACTTTTATTATAATCAATCAAT 3699
Query 3672 AAAGCTAAGCTAA 3684
|||||||| ||||
Sbjct 3700 AAAGCTAATCTAA 3712
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 183460510551
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5