BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492408
Length=2433
Score E
Sequences producing significant alignments: (Bits) Value
AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:1... 2769 0.0
AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:2033... 1471 0.0
AT4G24380.1 | Symbols: | INVOLVED IN: 10-formyltetrahydrofolat... 235 1e-60
> AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:12613590-12616117
REVERSE LENGTH=2342
Length=2342
Score = 2769 bits (1499), Expect = 0.0
Identities = 1724/1835 (94%), Gaps = 6/1835 (0%)
Strand=Plus/Plus
Query 173 GTCTCGCACTTTCAAATCTTCTACGCCGCCATGTCCAGAACATGTCCTCGAGAACGTGTT 232
|||||| | ||||||||||||| | ||||| |||||||| |||||||| |||||||| ||
Sbjct 268 GTCTCGAAATTTCAAATCTTCTCCCCCGCCGTGTCCAGATCATGTCCTTGAGAACGTTTT 327
Query 233 AGAGAACGTGCTTCAGTTCCTCACTTCCAGATGCGATCGCAACGCCGTTTCATTGGTCTG 292
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 328 AGAGAACGTGCTTCAGTTCCTCACTTCCAGATGCGATCGCAACGCAGTCTCATTGGTCTG 387
Query 293 CAAATCGTGGTATCGCGTCGAGGCTCAGACCCGATTCGAGGTTTTTATCGGTAACTGTTA 352
|| ||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct 388 CAGATCGTGGTATCGCGTCGAGGCTCAGACTCGATTAGAGGTTTTTATTGGAAACTGTTA 447
Query 353 CTCTCTTTCTCCTGCTCGGCTCACTCACCGGTTCAAGCGTCTTAGGTCTCTTGTGCTTAA 412
||| || |||||||||||||| | |||||||||||||||| |||||||||||||||||||
Sbjct 448 CTCGCTCTCTCCTGCTCGGCTTATTCACCGGTTCAAGCGTGTTAGGTCTCTTGTGCTTAA 507
Query 413 AGGGAAACCTAGGTTTGCTGATTTTAATCTCATGCCTCCTAATTGGGGAGCTCAATTCGC 472
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 508 AGGGAAACCTAGGTTTGCTGATTTTAATCTCATGCCTCCTAATTGGGGAGCTCAATTCTC 567
Query 473 GCCTTGGGTTGCTGCAACAGCTAAGGCTTATCCTTGGCTTGAGAAGGTTCATTTGAAGCG 532
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 568 TCCTTGGGTTGCTGCTACAGCTAAGGCTTATCCTTGGCTCGAGAAGGTTCATTTGAAGCG 627
Query 533 TATGTTTGTTACGGATGATGATTTAGCTCTTCTTGCTGAGTCGTTTCCTGGGTTCAAAGA 592
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 628 TATGTTTGTTACGGATGATGATTTGGCTCTTCTTGCTGAGTCGTTTCCTGGGTTCAAAGA 687
Query 593 GCTTACTTTGGTCTGCTGCGAAGGTTTTGGGACTAGTGGTATTGCTGTTGTTGCCAACAA 652
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||
Sbjct 688 GCTTACTTTGGTCTGCTGTGAAGGTTTTGGGACTAGTGGTATTGCTATTGTTGCTAACAA 747
Query 653 ATGCAGACAGCTAAAGGTTCTTGATCTGGTGGAGTCAGAAGTCACCGATGATGAGGTGGA 712
|||||| ||||||||||| |||||| || |||||||||||||||| ||||||||| ||||
Sbjct 748 ATGCAGGCAGCTAAAGGTCCTTGATTTGATGGAGTCAGAAGTCACAGATGATGAGTTGGA 807
Query 713 TTGGATTTCTTGTTTTCCTGTGGGTGAATCTCCTCTGGAGTCTTTGTCTTTTGACTGTGT 772
|||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||
Sbjct 808 TTGGATTTCTTGTTTTCCTGAGGGTGAAACTCATCTGGAGTCTTTGTCTTTTGACTGTGT 867
Query 773 TGAATCCCCTATCAATTTCAACGCATTGGAGGGGCTCGTGGTTAGGTCACCGTTCTTGAA 832
||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||
Sbjct 868 TGAATCCCCTATCAATTTCAAGGCATTGGAGGAGCTCGTGGTTAGGTCACCATTCTTGAA 927
Query 833 GAAGCTTAGACCCAACAGGTTTGTTTCCCTTGAAGAGCTGCATCGACTAATGGTTCGAGC 892
||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928 GAAACTTAGAACGAACAGGTTTGTTTCCCTTGAAGAGCTGCATCGACTAATGGTTCGAGC 987
Query 893 GCCGCAGTTAACCAGTCTTGGTACGGGTTCATTTAGTCCCGACAACGCGCCTCAGGGTGA 952
|||||||||||| |||||||| ||||| ||||||||||| ||||| | ||||||||| ||
Sbjct 988 GCCGCAGTTAACGAGTCTTGGGACGGGGTCATTTAGTCCAGACAATGTGCCTCAGGGAGA 1047
Query 953 ACAACTACCGGATTATGCAGCTGCTTTCCTTGCTTGTAAATCCATAGTTTGTCTCTCAGG 1012
||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1048 ACAACAACCGGATTATGCAGCTGCTTTTCGTGCTTGTAAATCCATAGTTTGTCTCTCAGG 1107
Query 1013 ATTCAGGGAATTCAGGCCTGAATACCTCCTAGCTATCTCTCCAGTTTGTGCTAATCTCAC 1072
|||||||||||| || || |||||||||||||| |||||| |||||||||||||||||||
Sbjct 1108 ATTCAGGGAATTTAGACCGGAATACCTCCTAGCCATCTCTTCAGTTTGTGCTAATCTCAC 1167
Query 1073 CTCTCTTAACTTCAGTTATGCTAACATTTCTCCTCACATGCTCATGCCCATCATACGCAA 1132
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 1168 CTCTCTTAACTTCAGTTATGCTAACATTTCTCCTCACATGCTCAAGCCCATCATAAGCAA 1227
Query 1133 CTGTCACAATATCCAAGTCTTCTGGGCTCTTGACTCGATACGCGATGAAGGACTACAGGC 1192
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1228 CTGTCACAATATCCGAGTCTTCTGGGCTCTTGACTCGATACGTGATGAAGGACTACAGGC 1287
Query 1193 AGTGGCTGCCACATGCAAGGAGCTCCGTGAGCTTCGGATTTTCCCTTTCGATCCTCGTGA 1252
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1288 AGTGGCTGCCACATGCAAGGAGCTCCGTGAGCTTCGGATTTTCCCTTTTGATCCTCGTGA 1347
Query 1253 AGACAGCGAAGGTCCTGTCTCAGGAGTAGGCCTGCAAGCAATATCAGAGGGATGTAGGAA 1312
|||||| |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||
Sbjct 1348 AGACAGTGAAGGTCCTGTCTCGGGAGTAGGCCTCCAAGCAATTTCAGAGGGCTGTAGGAA 1407
Query 1313 ACTAGAATCTATCCTGTACTTTTGCCAGCGGATGACTAATGGAGCTGTGACAGCCATGTC 1372
||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1408 ACTGGAATCTATCCTGTACTTTTGCCAGAATATGACCAATGGAGCTGTGACAGCCATGTC 1467
Query 1373 TGAGAACTGCCCGCAGCTTACTGTGTTTAGGCTTTGCATAATGGGTCGCCATAGGCCTGA 1432
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1468 GGAGAACTGCCCGCAGCTTACTGTGTTTAGACTTTGCATAATGGGTCGCCATAGGCCTGA 1527
Query 1433 CCACGTGACAGGAAAGCCAATGGACGATGGATTTGGTGCCATTGTTAAAAACTGCAAGAA 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1528 CCACGTGACAGGAAAGCCAATGGACGATGGATTTGGTGCCATTGTTAAAAACTGCAAGAA 1587
Query 1493 GCTAACCCGACTTGCAGTGTCAGGGTTACTAACAGATGAAGCTTTTAGCTATATAGGAGA 1552
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1588 GCTAACCCGACTTGCAGTATCAGGGTTACTAACAGATGAAGCTTTTAGCTATATAGGAGA 1647
Query 1553 ATATGGGAAATTGATCCGCACGTTATCTGTAGCTTTTGCTGGGAACAGTGACAAGGCTCT 1612
|||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1648 ATATGGGAAATTGATCCGTACGCTATCTGTAGCGTTTGCTGGGAACAGTGACAAGGCTCT 1707
Query 1613 GAGATATGTTCTTGAGGGTTGTCCTAAACTACAAAAGCTTGAAATCAGGGACAGTCCCTT 1672
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1708 GAGATACGTTCTTGAGGGTTGTCCTAAACTACAAAAGCTTGAGATCAGGGACAGTCCCTT 1767
Query 1673 TGGGGATGCTGGATTGCGCTCTGGTATGCATCGGTATTGCAACATGAGGTTTGTTTGGTT 1732
||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 1768 TGGAGATGTTGGATTGCGCTCTGGTATGCATCGGTATTCCAATATGAGGTTTGTTTGGTT 1827
Query 1733 GTCGTCATGTGTCTTATCGC-TGGGAGGCTGCAGGGATGTTGCTCAGGCTCTGCCTAATG 1791
|||||||||| || |||| | ||| ||||||||||| |||| |||| |||||||||||||
Sbjct 1828 GTCGTCATGTCTCATATCCCGTGG-AGGCTGCAGGGGTGTTTCTCATGCTCTGCCTAATG 1886
Query 1792 TAGTGGTGGAAGTATTTGGATCAGATGGTGATGATGACGACGACACTGTCACTGGGGATT 1851
|||| ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||
Sbjct 1887 TAGTCGTGGAAGTATTTGGAGCCGATGGTGATGATGACGAAGACACTGTCACTGGGGATT 1946
Query 1852 ATGTTGAGACATTGTACTTGTATCGGTCCCTTGATGGCCCAAGGAA--A-GCTCCAAAGT 1908
||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||
Sbjct 1947 ATGTTGAGACATTGTACTTGTATCGATCCCTTGATGGCCCAAGGAAGGATGCTCCAAAGT 2006
Query 1909 TTGTAACAATTTTATGAGAAAAAACTTTGGTTCAGATGATGCCGTGCTTGAGGAAAAGCA 1968
||||||||||||||||||||||| ||||||| || |||| ||| || ||| |||||||||
Sbjct 2007 TTGTAACAATTTTATGAGAAAAA-CTTTGGTGCAAATGAGGCCATGATTGGGGAAAAGCA 2065
Query 1969 AAGCTAGCTAGCAGAAGAGAATGTGTTTGTAAACT 2003
|| ||||| ||||||||| ||||||||||||||||
Sbjct 2066 AAACTAGCAAGCAGAAGATAATGTGTTTGTAAACT 2100
> AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20333964-20336665
REVERSE LENGTH=2450
Length=2450
Score = 1471 bits (796), Expect = 0.0
Identities = 1441/1746 (83%), Gaps = 70/1746 (4%)
Strand=Plus/Plus
Query 213 CATGTCCTCGAGAACGT-GTTAGAGAACGTGCTTCAGTTCCTCA-CTTCCAGATGCGATC 270
||||| ||||| ||||| || |||||||| ||||||||||| | ||| ||||| || |
Sbjct 291 CATGTTCTCGAAAACGTACTT-GAGAACGTTCTTCAGTTCCT-AGATTCAAGATGTGACC 348
Query 271 GCAACGCCGTTTCAT-TGGTCTGCAAATCGTGGTATCGCGTCGAGGCTCAGACCCGATTC 329
| ||||| | ||| | | || |||||||| |||| || || || ||| ||| ||| ||
Sbjct 349 GTAACGCTGCTTC-TCTAGTTTGCAAATCTTGGTGGCGTGTTGAAGCTTTGACTCGA-TC 406
Query 330 -GAGGTTTTTATCGGTAACTGTTACTCTCTTTCTCCTGCTCGGCTCACTCACCGGTTCAA 388
||||||||||| |||||||||||| |||||||||| || || | ||||| | |||||
Sbjct 407 TGAGGTTTTTATTGGTAACTGTTACGCTCTTTCTCCGGCGAGGTTGACTCAGAGATTCAA 466
Query 389 GCGTCTTAGGTCTCTTGTGCTTAAAGGGAAACCTAGGTTTGCTGATTTTAATCTCATGCC 448
|||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 467 GCGTGTTAGGTCTCTTGTGCTGAAAGGGAAACCTAGGTTTGCTGATTTCAATCTCATGCC 526
Query 449 TCCTAATTGGGGAGCTCAA-TTCGCGCCTTGGGTTGCTGCAACAGCT-AAGGCTTATCCT 506
|||| ||||||| ||| || || || ||||||||| || | | ||| || |||||||||
Sbjct 527 TCCTGATTGGGGTGCT-AATTTTGCTCCTTGGGTTTCTACTATGGCTCAA-GCTTATCCT 584
Query 507 TGGCTTGAGAAGGTTCATTTGAAGCGTATGTTTGTTACGGATGATGATTTAGCTCTTCTT 566
|| |||||||| ||| |||||||| | ||||||||||| |||||||||||||||||||||
Sbjct 585 TGTCTTGAGAAAGTTGATTTGAAGAGGATGTTTGTTACTGATGATGATTTAGCTCTTCTT 644
Query 567 GCTGAGTCGTTTCCTGGGTTCAAAGAGCTTACT-TTGGTCTGCTGCGAAGGTTTTGGGAC 625
||||| || ||||||||||| |||||||||| | ||||| || || ||||||||||| ||
Sbjct 645 GCTGACTCTTTTCCTGGGTTTAAAGAGCTTA-TCTTGGTTTGTTGTGAAGGTTTTGGTAC 703
Query 626 TAGTGGTAT-TGCTGTTGTTGCCAACAAATGCAGACAGCT-AAAGGTTCTTGATCTGGTG 683
||||||||| | || ||||||||||||| |||||| |||| ||| || |||||| || |
Sbjct 704 TAGTGGTATCT-CTATTGTTGCCAACAAGTGCAGAAAGCTGAAA-GTGCTTGATTTGATT 761
Query 684 GAGTCAGAAGTCACCGATGATGAGGTGGATTGGATTTCTTGTTTTCCTGTGGGTG-AATC 742
||||| || ||||| |||||||| ||||||||||| |||||||| |||| || || || |
Sbjct 762 GAGTCTGAGGTCACGGATGATGAAGTGGATTGGATCTCTTGTTTCCCTGAGGATGTAA-C 820
Query 743 TCCTCTGGAGTCTTT-GTCTTTTGACTGTGTTGAATCCCCTATCAATTTCAA--CGCATT 799
| | |||||||||| | ||||||||||||| ||| | ||||||||||| || ||| ||
Sbjct 821 TTGTTTGGAGTCTTTAG-CTTTTGACTGTGTGGAAGCTCCTATCAATTTTAAGGCGC-TT 878
Query 800 GGAGGGGCTCGTGGTTAGGTCACCGTTCTTGAAGAAGCTTAGACCCAACAGGTTTGTTTC 859
||||| || || | ||||||||||||||||||||| ||||| | ||||||||||| ||
Sbjct 879 -GAGGGTCTTGTTGCTAGGTCACCGTTCTTGAAGAAACTTAGGCTAAACAGGTTTGTGTC 937
Query 860 CCTTGAAGAGCTGCATCGACTAATGGTTCGAGCGCCGCAG-TTAACCAGTCTTGGTACGG 918
|||| ||||| ||||| || | || |||| || ||| || || |||||||| || |
Sbjct 938 TCTTGTGGAGCTACATCGTCTGCTACTTGGAGCTCCACAGCTT-ACTAGTCTTGGGACTG 996
Query 919 GTTCATTTAGTCC-CGACAACGCGCCTCAGGGTGAACAACTACCGGATTATGCAGCTGC- 976
|||||||||| || || | | |||||| |||| ||| ||| |||||||| |||||
Sbjct 997 GTTCATTTAG-CCATGATGAGGAACCTCAGAGTGAGCAAGAACCAGATTATGCTGCTGCA 1055
Query 977 TTTCCTTGCTTGTAAATCCATAGTTTGTC-TCTCAGGATTCAGGGAATTCAGGCCTGAAT 1035
||| | |||||||||||| ||||||| | | ||||| || || || || | ||| || |
Sbjct 1056 TTT-CGTGCTTGTAAATCTGTAGTTTG-CTTGTCAGGGTTTAGAGAGTTGATGCCGGAGT 1113
Query 1036 A-CCTCCTAGCTATCTCTCCAGTTTGTGCTAATCTCACCTCTCTTAACTTCAGTTATGCT 1094
| | ||| |||||||| ||| || || |||||||||||||| || |||||||||||||||
Sbjct 1114 ATCTTCC-AGCTATCTTTCCGGTGTGCGCTAATCTCACCTCCCTGAACTTCAGTTATGCT 1172
Query 1095 AACATTTCTCCTCACATGCTCATGCCCATCATACGCAACTGTCACAATA-TCCAAGTCTT 1153
|||||||||||| ||||| ||| ||||||||||| ||| || ||||| | |||| || ||
Sbjct 1173 AACATTTCTCCTGACATGTTCAAGCCCATCATACTCAATTGCCACAA-ACTCCAGGTGTT 1231
Query 1154 CTGGGCTCTTGACTCGATACGCGATGAAGGACTACAGGCAGTGGCTGCCACATGCAAGGA 1213
|||||| ||||| || ||| | |||||||||||||||||||| || ||||| ||||||||
Sbjct 1232 CTGGGCCCTTGATTCAATATGTGATGAAGGACTACAGGCAGTTGCAGCCACTTGCAAGGA 1291
Query 1214 GCTCCGTGAGCTTC-GGATTTTCCCTTTCGATCCTCGTGAAGACAGCGAAGGTCCTGTCT 1272
|||||||| | || |||| |||||||| |||||||| |||||||| |||||||||||||
Sbjct 1292 ACTCCGTGAAC-TCAGGATCTTCCCTTTTGATCCTCGGGAAGACAGTGAAGGTCCTGTCT 1350
Query 1273 CAGGAGTAGGCCTGCAAGCAATATCAGAGGGATGTAGGAAACTAGAATCTATCCTGTACT 1332
| | | ||||||| |||||||| || ||||| |||||||||||||||||||| || ||||
Sbjct 1351 CTGAATTAGGCCTCCAAGCAATCTCCGAGGGTTGTAGGAAACTAGAATCTATTCTCTACT 1410
Query 1333 TTTGCCAGCGGATGACTAATGGAGCTGTGACAGCCATGTCTGAGAACTG-CCCGCAGCTT 1391
|||||||||| |||||||||| ||||||| ||||||||| |||||||| || | |||||
Sbjct 1411 TTTGCCAGCGCATGACTAATGCCGCTGTGATAGCCATGTCAGAGAACTGTCCAG-AGCTT 1469
Query 1392 ACTGTGTTTAGGCTTTGCATAATGGGTCGCCATAGGCCTGACCACGTGACAGGAAAGCCA 1451
|||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||
Sbjct 1470 ACTGTGTTTAGGCTGTGCATAATGGGTCGACATAGGCCTGACCATGTAACAGGAAAGCCT 1529
Query 1452 ATGGACGATGGATTTGGTGCCATTGTTAAAAACTGCAAGAAGCTAACCCGACTTGCAGTG 1511
|||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1530 ATGGACGAGGGATTTGGTGCCATTGTTAAAAACTGCAAGAAGCTAACTCGCCTTGCAGTG 1589
Query 1512 TCAGGG-TTACTAACAGATGAAGCTTTTAGCTATATAGGAGAATATGGGAAATTGATCCG 1570
|| ||| || || |||||| |||||||||| ||||| || || |||||||||||| ||||
Sbjct 1590 TC-GGGATTGCTGACAGATCAAGCTTTTAGGTATATGGGTGAGTATGGGAAATTGGTCCG 1648
Query 1571 CACG-TTATCTGTAGCTTTTGCTGGGAACAGTGACAAGGCTCTGAGATATGTTCTTGAGG 1629
||| || || ||||||||||| ||| ||||||||| |||||||||| |||| || || |
Sbjct 1649 TACGCTT-TCAGTAGCTTTTGCAGGGGACAGTGACATGGCTCTGAGACATGTCCTAGAAG 1707
Query 1630 GTTGTCCTAAACTACA-AAAGCTTGAAATCAGGGACAGTCCCTTTGGGGATGCTGGATTG 1688
|||| |||| ||| || ||| ||||| || ||||||||||||||||| |||| || |||
Sbjct 1708 GTTGCCCTAGACTGCAGAAA-CTTGAGATAAGGGACAGTCCCTTTGGAGATGTTGCATTA 1766
Query 1689 CGCTCTGGTATGCATCGGTATTGCAACATGAGGTTTGTTTGGTTGTC-GTCATGT-GTCT 1746
|| |||||||||||||| |||| ||||||||||||||||||| |||| | ||||| | ||
Sbjct 1767 CGGTCTGGTATGCATCGCTATTACAACATGAGGTTTGTTTGGATGTCAG-CATGTAG-CT 1824
Query 1747 TATCGCTGGGAGGCTGCAGGGATGTTGCTC-AGGCTCTGCCTAATGTAGTGGTGGAAGTA 1805
| || |||| |||||| |||| |||| | || | |||| ||| |||| |||||||||
Sbjct 1825 TGTCTAAGGGATGCTGCAAGGATATTGCACGAG-CAATGCCGAATCTAGTTGTGGAAGTA 1883
Query 1806 TTTGGATCAGATGGTGATGATGACGACGACACTGTCACTGGGGATTATGTTGAGACATTG 1865
||||||| |||| |||||||||| | | | | ||| ||||||| ||||| ||
Sbjct 1884 ATTGGATCGGATGATGATGATGAC-A--A---T---A--GGG-ATTATGTCGAGACTTTA 1931
Query 1866 TACTTGTATCGGTCCCTTGATGGCCCAAGGAA--A-GCTCCAAAGTTTGTAACAATTTTA 1922
||| |||||||||| |||||||| |||||||| | || |||||||| || || ||||||
Sbjct 1932 TACATGTATCGGTCTCTTGATGGTCCAAGGAATGATGCACCAAAGTTCGTCACGATTTTA 1991
Query 1923 TGAGAA 1928
| ||||
Sbjct 1992 T-AGAA 1996
> AT4G24380.1 | Symbols: | INVOLVED IN: 10-formyltetrahydrofolate
biosynthetic process, folic acid and derivative biosynthetic
process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING:
15 growth stages; CONTAINS InterPro DOMAIN/s: Serine
hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein
match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1);
Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr4:12612535-12613719 FORWARD
LENGTH=857
Length=857
Score = 235 bits (127), Expect = 1e-60
Identities = 147/156 (94%), Gaps = 4/156 (3%)
Strand=Plus/Minus
Query 2004 ATGCTC-AATGGTATCGATGAATGCGGTAACTATCTCCAAGCTTTTGTCATCAAGCCTCG 2062
|||||| || ||||||||| |||||||||||| ||||||||||||| ||||||||||| |
Sbjct 667 ATGCTCTAA-GGTATCGATAAATGCGGTAACTTTCTCCAAGCTTTTCTCATCAAGCCTTG 609
Query 2063 GGACAGTATGGCCTTTGGGATGATGGACAACCACCGGATTCTTGTACGATTCTATCAGCT 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 GGACAGTATGGCCTTTGGGATGATGGACAACCACCGGATTCTTGTACGATTCTATCAGCT 549
Query 2123 GGGTTCCGTAAGGTTTCAAGAAA-TCAGTCTCTCCT 2157
| |||||||||||||||| |||| ||||||||||||
Sbjct 548 GAGTTCCGTAAGGTTTCA-GAAAATCAGTCTCTCCT 514
Score = 219 bits (118), Expect = 1e-55
Identities = 128/133 (96%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 2242 CCTAAAAAGTGGAGGGAGAGAGTTTCCAAGGAAGACGAATAAGCATTCTCCGCCAACTTG 2301
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||
Sbjct 516 CCTAAAAAGTGGAGGGAGAGAGTTTCCAAGGAAGACGAATATGCATTCTCGGCCAATTTG 457
Query 2302 GCGGATTTGAGCTTAGCTCCTCCAATGATTATAATAAACTTAATCTTTGGTACTTTCTGA 2361
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 456 GCGGATTTGAGCTTAGCTCCTCCAATGATTATAACAAACTTAATCTTTGGTACTTTCTGA 397
Query 2362 AGTGCAATTCCCT 2374
| |||||||||||
Sbjct 396 AATGCAATTCCCT 384
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120832711815
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5