BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492463
Length=2286
Score E
Sequences producing significant alignments: (Bits) Value
AT4G24000.1 | Symbols: ATCSLG2, CSLG2 | cellulose synthase like... 3208 0.0
AT4G24010.1 | Symbols: ATCSLG1, CSLG1 | cellulose synthase like... 2224 0.0
AT4G23990.1 | Symbols: ATCSLG3, CSLG3 | cellulose synthase like... 2126 0.0
> AT4G24000.1 | Symbols: ATCSLG2, CSLG2 | cellulose synthase like
G2 | chr4:12462030-12465625 FORWARD LENGTH=2435
Length=2435
Score = 3208 bits (1737), Expect = 0.0
Identities = 2094/2265 (92%), Gaps = 29/2265 (1%)
Strand=Plus/Plus
Query 2 TATATATTTGTGGTCATTATTTTCTCGAAAAACCAGTTGCCTTCCTTGAAAAGATGGAAC 61
|||||||||||||||| || |||||| |||||||||||||||||| | ||||||||||||
Sbjct 60 TATATATTTGTGGTCACTAATTTCTCCAAAAACCAGTTGCCTTCCGTAAAAAGATGGAAC 119
Query 62 CTCGGAGAAAACACTCGACGGCCCTCCACACGTGTCATCCCTGCCGGCGCGCCATTCCAT 121
||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 120 CTCAGAGAAAACACTCGACAGCCCTCCACACGTGTCATCCCTGCCGGCGAACCATTCCAT 179
Query 122 ACAGAATCTACGCCGTAATCCACACGTGTGGCATCATAGCCCTCATGTATCACCATGTAC 181
||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||
Sbjct 180 ACAGAATCTACGCCGTATTTCACACGTGTGGCATCATAGCTCTCATGTATCACCATGTAC 239
Query 182 TCTCACTTCTC-ACAGCAAACAACACTCTTATAACATGTCTTCTTCTCCTCTCCGATATT 240
|||| || || || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 240 ACTCAATTGTCAAC-GCAAACAACACTCTAATAACATGTCTTCTTCTCCTCTCCGATATT 298
Query 241 GTTCTCGCCTTCATGTGGGTAACCACAACTTCCCTCCGGTTAAACCCGGTTCACCGGACG 300
||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||
Sbjct 299 GTTCTCGCCTTCATGTGGGCAACCACAACTTCCCTCCGGTTAAACCCGATTCATCGGACC 358
Query 301 GAGTACCCTGAGAAATATGCAGCTAAACCGGAGGATTTTCCGAAGCTGGACGTGTTTATA 360
||||||||||| |||||||| |||||||||||||| ||||| ||||||||||| ||||||
Sbjct 359 GAGTACCCTGAAAAATATGCTGCTAAACCGGAGGACTTTCCAAAGCTGGACGTTTTTATA 418
Query 361 TGCACGGCTGATCCGTACAAGGAGCCTCCGATGATGGTGGTTAACACCGCCTTATCTGTG 420
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 419 TGCACGGCTGATCCGTACAAGGAGCCTCCGATGATGGTGGTTAACACCGCTTTATCGGTG 478
Query 421 ATGGCCTATGAATATGCGTC-CGATAAGATCTCAGTCTATGTATCGGACGATGGAGGATC 479
||||| || || ||| |||| | ||||||||||||| || ||||||||||||||||||||
Sbjct 479 ATGGCTTACGAGTATCCGTCTC-ATAAGATCTCAGTGTACGTATCGGACGATGGAGGATC 537
Query 480 TTCATTGACTTTGTTTGCTCTTATGGAGGCTGCCAAGTTCTCTAAGCGTTGGTTGCCCTT 539
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 538 TTCCTTGACTTTGTTTGCTCTTATGGAGGCTGCCAAGTTCTCTAAGCATTGGTTGCCCTT 597
Query 540 TTGCAAGAATAACAATGTTCAAGATCGGTCCCCTGAAGTTTATTTCTCATCTGAGTCACA 599
||||||||||||||||||||||||||| || |||||||||||||| || || |||||||
Sbjct 598 TTGCAAGAATAACAATGTTCAAGATCGCTCTCCTGAAGTTTATTTTTCTTCAAAGTCACA 657
Query 600 GTC-TCAGAGTGAGGAAGCTGAAAACCTTAAGCTGATGTACGAAGACATGAAGAGTAGAG 658
|| || |||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 658 TTCTTC-GAGTGATGAAGCTGAAAATCTTAAGATGATGTACGAAGACATGAAGAGTAGAG 716
Query 659 TAGAAAATGTGGCCGAGAGTGGAAAAGTTGAGACTGCATTTATCACATGCGATCAATTTC 718
| ||| |||||| |||||| ||||||||||||||||| |||||| ||||||||||||||
Sbjct 717 TCGAACATGTGGTCGAGAGCGGAAAAGTTGAGACTGCGTTTATCGCATGCGATCAATTT- 775
Query 719 A-TGGGGTATTCGATTTGTGGACAGATAAATTCACTCGTCATGACCATCCCACAATTATT 777
| | | || |||||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct 776 AGTTGTGTGTTCGATCTGTGGACAGATAAATTCACTCGTCATGACCATCCTACCATTATT 835
Query 778 CA-GGTGCTACAACACAACGAAACAGATGAGATGATGCCAAACCTAATCTATGTTTCAAG 836
| |||||||||||| |||||||| | ||||||||||||||||| || |||||||||||
Sbjct 836 -ATGGTGCTACAACATAACGAAAC--A-GAGATGATGCCAAACCTTATATATGTTTCAAG 891
Query 837 AGAGAAGAGTAAAGTTTCACCACATCATTAT-AAAGCCGGTGCTCTTAATACTTTGTTAC 895
||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 892 AGAAAAGAGTAAAGTTTCACCACATCATT-TCAAAGCCGGTGCTCTTAATACTTTGTTAC 950
Query 896 GAGTATCTGCCGTGATGACAAACTCACCAATCATTCTAACACTAGATTGTGACATGTACT 955
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 GTGTATCTGCCGTGATGACAAACTCACCAATCATTCTAACACTAGATTGTGACATGTACT 1010
Query 956 CAAACAATCCTACAACACCACTTCATGCTCTATGCTATTTGTCAGATCCTAAAATCAATT 1015
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1011 CAAACAATCCTACAACACCACTTCATGCTCTGTGCTATTTGTCAGACCCTAAAATCAATT 1070
Query 1016 TTGGTTTAGGATTTGTGCAATTTCCTCAAAAATTTCAAGGAATAAACAAAAATGATATTT 1075
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1071 TTGATTTAGGATTTGTGCAATTTCCTCAAAAATTTCAAGGAGTAAACAAAAATGATATTT 1130
Query 1076 ATGCATCGGAGCTCAAACGCCCATTTGACATCAACACGATTGGGTTTGATGGACTTACGG 1135
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 1131 ATGCATCCGAGCTCAAACGCCCATTTGACATCAACACGGTTGGGTTTGATGGACTTATGG 1190
Query 1136 GCCCAGTTCATATGGGAACTGGGTGTTTCTTCAATCGACGGGCATTTTATGGGCCTCCCG 1195
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1191 GACCAGTTCATATGGGAACTGGGTGTTTCTTCAATCGACGGGCGTTTTATGGGCCTCC-G 1249
Query 1196 -CTAGTTTGATTTTGCCTGAGATAGAAAAACTTGGACCAAATCGGATTGTCGATATGTCC 1254
||| ||||||||||||||||||||||| | |||| ||||||||||||| ||||| | ||
Sbjct 1250 ACTACTTTGATTTTGCCTGAGATAGAAACATTTGGGCCAAATCGGATTGCCGATAAGCCC 1309
Query 1255 ATTAAGAACC-AAGATATTTTGGCGTTGGCACACGATGTAGCAGGATGTAACTACGAGCG 1313
||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1310 ATTAA-AGCCCAAGATATTTTGGCGTTGGCACACGATGTAGCAGGATGTAACTACGAGTG 1368
Query 1314 CAACACCAATTGGGGATCCAAGATAGGGTTCAGGTACGGCTCATTAGTAGAAGACTACTA 1373
||||||||||||||||||||||||||| ||||| || || |||||||||||||||||||
Sbjct 1369 CAACACCAATTGGGGATCCAAGATAGGTTTCAGATATGGGTCATTAGTAGAAGACTACTT 1428
Query 1374 CACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAGTATTTTGCAGCCCTA-AAAAGG 1432
||||||||||||||||||||||||||||||||||||| | ||||||||||| | |||||
Sbjct 1429 CACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAATTTTTTGCAGCCCGACAAAAG- 1487
Query 1433 CTGCATTTTATGGAGAGTCCCCAAAATGCCTAACTGATATAATAGGCCAACAAATCCGAT 1492
|||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 1488 CTGCATTTTATGGAGACTCCCCAAAATGCCTAACGGATGTAATAGGCCAACAAATCCGAT 1547
Query 1493 GGTCCGTTGGACTTCTTGAAGTAACTTTTTCAAGGTACAACCCAATTACCTATGGATTGA 1552
||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||| | |
Sbjct 1548 GGTCCGTTGGACTTCTTGAAGTAGCTTTTTCAAGATACAATCCACTTACCTATGGAATCA 1607
Query 1553 AGTCACTGAGCCTATTAATGAGCTTAGGCTATTGCCACTATGCATTTTGGCCGTTTTGGT 1612
|| || |||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1608 AGCCATTGAGCCTATTAATGAGCTTAGGTTATTGCCACTATGCATTTTGGCCATTTTGGT 1667
Query 1613 CAATTCCTCTCGTCGTCTATGGACTTTTACCCCAAGTTGCCCTCATACATGGATTTAGCG 1672
||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1668 GTATTCCTCTCGTTGTCTATGGAATTTTACCCCAAGTTGCCCTCATACATGGAGTTAGCG 1727
Query 1673 TCTTCCCCAAGGCATCGGATCCGTGGTTTTGGCTTTACATCATCTTGTTTCTCGGTGGAT 1732
|||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct 1728 TCTTTCCCAAGGCATCGGATCCATGGTTTTGGCTTTACATTATCTTGTTTCTCGGTGGGT 1787
Query 1733 ACGCGCAAGATCTATCGGACTTTTTATTAGAAGGAGGAACTTATAGGAAATGGTGGAACG 1792
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1788 ACGCGCAAGATCTATCAGACTTTTTATTAGAAGGAGGAACTTATCGGAAATGGTGGAACG 1847
Query 1793 ATCAAAGGATGTGGATGGTAAGAGGACTTTCTTCTTTCTTCTTTGGTTTTACAGAGTTCA 1852
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1848 ATCAAAGAATGTGGATGGTGAGAGGACTCTCTTCTTTCTTCTTTGGTTTTACAGAGTTCA 1907
Query 1853 CTCTCAAAACCCTAAACCTCTCGACTCAAGGAT-TCAACGTCACCAGTAAAGCCAACGAC 1911
|||||||||||||||||||||| |||||||||| | || ||||| |||||| ||||||||
Sbjct 1908 CTCTCAAAACCCTAAACCTCTCCACTCAAGGATAT-AATGTCACGAGTAAATCCAACGAC 1966
Query 1912 GATAATGAACAAATGAAGCGGTACGAGCAAGAGATCTTTGATTTCGGGCCCTCTTCGTCC 1971
||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct 1967 GATAATGAACAAATGAAGCGGTATGAGCAAGAGATCTTCGATTTTGGGCCCTCTTCGTCC 2026
Query 1972 ATGTTCTTGCCCATGACTACGGTCGCCAT-AGTGAATCTACTTGCTTTTGTATG-G-GGA 2028
|||||||||||||| |||||||||||||| | ||||||| || |||||| ||| | ||
Sbjct 2027 ATGTTCTTGCCCATTACTACGGTCGCCATCA-TGAATCTGCTAGCTTTT--ATGCGTGGC 2083
Query 2029 ATTTATGTTATTTTCACTTGGGGAGAAGGACCCGTCCTTGAACTGATGCTGGCGAGTTTC 2088
| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2084 CTATATGGTATTTTCACTTGGGGAGAAGGACCCGTCCTTGAACTGATGCTAGCGAGTTTC 2143
Query 2089 GTGGTGGTAAATTGCTTACCGATCTATGAAGCCATGGTGTTGAGGATCGATGACGGAAAA 2148
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 GCGGTGGTGAATTGCTTACCGATCTATGAAGCCATGGTGTTGAGGATCGATGACGGAAAA 2203
Query 2149 TTAACATCAAGGATTTGTTTCTTAGCTGGGCTCCTCACTTTTGTTCTTACAGGGTCATGC 2208
||| || ||||||||||||||||||||||||||||| |||||||||||| |||||| ||
Sbjct 2204 TTACCAAAAAGGATTTGTTTCTTAGCTGGGCTCCTCAGTTTTGTTCTTACCGGGTCAGGC 2263
Query 2209 TACTTCCTCCTCAAGTAACTTCACCATTAGGTCATTATCAAAAAA 2253
|||||| |||||||||||||||||||||||| |||| | ||||||
Sbjct 2264 TACTTCTTCCTCAAGTAACTTCACCATTAGGCCATTGTAAAAAAA 2308
> AT4G24010.1 | Symbols: ATCSLG1, CSLG1 | cellulose synthase like
G1 | chr4:12466345-12469844 FORWARD LENGTH=2413
Length=2413
Score = 2224 bits (1204), Expect = 0.0
Identities = 1880/2201 (85%), Gaps = 68/2201 (3%)
Strand=Plus/Plus
Query 84 CCTCCACACGTGTCATCCCTGCCGGCGCGCCATTCCATACAGAATCTACGCCGTAATCCA 143
|||||||||||||||||| ||||||||| |||||||||| |||||||||||| || | ||
Sbjct 85 CCTCCACACGTGTCATCCTTGCCGGCGCACCATTCCATATAGAATCTACGCCATATTTCA 144
Query 144 CACGTGTGGCATCATAGCCCTCATGTATCACCATGTACTCTCACTTCTCACAGCAAACAA 203
|||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||
Sbjct 145 CACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCACTTGTCACAGCAAACAA 204
Query 204 CACTCTTATAACATGTCTTCTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGTAAC 263
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 205 CACTCTTATAACATGTCTTCTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGCAAC 264
Query 264 CACAACTTCCCTCCGGTTAAACCCGGTTCACCGGACGGAGTACCCTGAGAAATATGCAGC 323
||||||||||||||| |||||||||||||| ||||| |||| ||| ||||||||||||||
Sbjct 265 CACAACTTCCCTCCGCTTAAACCCGGTTCATCGGACCGAGTGCCCGGAGAAATATGCAGC 324
Query 324 TAAACCGGAGGATTTTCCGAAGCTGGACGTGTTTATATGCACGGCTGATCCGTACAAGGA 383
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 325 TAAACCGGAGGACTTTCCAAAGCTGGACGTGTTTATATGCACGGCTGATCCGTACAAGGA 384
Query 384 GCCTCCGATGATGGTGGTTAACACCGCCTTATCTGTGATGGCCTATGAATATGCGTCCGA 443
|||||| |||||||| ||||||||||| ||||| |||||||| || || ||| |||| ||
Sbjct 385 GCCTCCAATGATGGTTGTTAACACCGCTTTATCGGTGATGGCTTACGAGTATCCGTCAGA 444
Query 444 TAAGATCTCAGTCTATGTATCGGACGATGGAGGATCTTCATTGACTTTGTTTGCTCTTAT 503
||||||||| || ||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct 445 TAAGATCTCGGTGTATGTATCGGACGATGGAGGATCGTCGTTGACTTTCTTTGCTCTTAT 504
Query 504 GGAGGCTGCCAAGTTCTCTAAGC-GTTGGTTGCCCTTTTGCAAGAATAACAATGTTCAAG 562
|| ||||| ||||||||||||| | |||||||||||||||||||| || ||||||||||
Sbjct 505 TGAAGCTGCTAAGTTCTCTAAGCAG-TGGTTGCCCTTTTGCAAGAAGAATAATGTTCAAG 563
Query 563 ATCGGTCCCCTGAAGTTTATTTCTCATCTGAGTCACAGTCTCAG-AGTGAGGAAGCTGAA 621
||||||| ||||||||||||||||| || |||||||| |||| | ||||| |||||||||
Sbjct 564 ATCGGTCTCCTGAAGTTTATTTCTCTTCAGAGTCACATTCTC-GAAGTGATGAAGCTGAA 622
Query 622 AACCTTAAGCTGATGTACGAAGACATGAAGAGTAGAGTAGAAAATGTGGCCGAGAGTGGA 681
||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 623 AACCTTAAGATGATGTACGAAGACATGAAGAGTAGAGTAGAACATGTGGTGGAGAGTGGA 682
Query 682 AAAGTTGAGACTGCATTTATCACATGCGATCAATTTCATGGGGTATTCGATTTGTGGACA 741
|||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 683 AAAGTTGAAACTGCGTTTATCACATGCGACCAATTTCGTGGGGTATTCGATTTGTGGACC 742
Query 742 GATAAATTCACTCGTCATGACCATCCCACAATTATTCA-G-G-TGC----TA-C-A-ACA 791
|| ||||||| ||||||||||||||||||||||||||| | | ||| || | | |||
Sbjct 743 GACAAATTCAGTCGTCATGACCATCCCACAATTATTCAGGTGTTGCAAAATAGCGAGACA 802
Query 792 CA-A-CG--AA-A-CAG---ATGAGATGATGCCAAACCTAATCTATGTTTCAAGAGAGAA 842
| | | || | ||| || | || ||||||||||||||||||||||||||||||||
Sbjct 803 GATATGGACAATACCAGAAAAT-ATATAATGCCAAACCTAATCTATGTTTCAAGAGAGAA 861
Query 843 GAGTAAAGTTTCACCACATCATTAT-AAAGCCGGTGCTCTTAATACTTTGTTACGAGTAT 901
||||||||||||||||||||||| | ||||| |||||||||||||||||| |||||||||
Sbjct 862 GAGTAAAGTTTCACCACATCATT-TCAAAGCTGGTGCTCTTAATACTTTGCTACGAGTAT 920
Query 902 CTGCCGTGATGACAAACTCACCAATCATTCTAACACTAGATTGTGACATGTACTCAAACA 961
| | ||||||||||| ||||| ||||||||||||||||| ||||| ||||| || |||
Sbjct 921 CAGGGGTGATGACAAATTCACCGATCATTCTAACACTAGACTGTGATATGTATTCGAACG 980
Query 962 ATCCTACAACACCACTTCATGCTCTATGCTATTTGTCAGATCCTAAAATCAATTTTGGTT 1021
| || |||||| ||| |||| | |||||||| |||||||| ||||||| | ||||
Sbjct 981 ACCCGGCAACACTGGTTCGTGCTTTGTGCTATTTAACAGATCCTGAAATCAAATCCGGTT 1040
Query 1022 TAGGATTTGTGCAATTTCCTCAAAAATTTCAAGGAATAAACAAAAATGATATTTATGCAT 1081
|||||| |||||| |||||||| ||||||| |||||||| |||||||||||| ||||| |
Sbjct 1041 TAGGATATGTGCAGTTTCCTCAGAAATTTCTAGGAATAAGCAAAAATGATATATATGCTT 1100
Query 1082 CG-GAGCTCAAACGCC-CATTTGAC-ATCAACACGATTGGGTTTGATGGACTTACGGGCC 1138
| || |||||||| | || | || || | | ||||||||||||| || | ||| |
Sbjct 1101 -GTGAAAACAAACGCCTC-TTC-ATTATTAATATGGTTGGGTTTGATGGTCTAATGGGTC 1157
Query 1139 CAGTTCATATGGGAACTGGGTGTTTCTTCAATCGACGGGCATTT-TATGGGCCTCCCGCT 1197
|| |||| |||||||||| |||||||| |||||||| || ||| ||||| ||||| |
Sbjct 1158 CAACTCATGTGGGAACTGGTTGTTTCTTTAATCGACGAGC-TTTCTATGGACCTCCATAT 1216
Query 1198 A-GTTTGATTTTGCCTGAGATAGAAA-AACTTG-GACCAAATCGGATTGTCG-ATATGTC 1253
| ||| |||||| || |||||| || |||| | || ||||||||| || ||| |||
Sbjct 1217 ATGTT-GATTTTACCGGAGATA-AATGAACTAAAG-CCTTATCGGATTG-CGGATAAGTC 1272
Query 1254 CATTAAGAACC-AAGATATTTTGGCGTTGGCACACGATGTAGCAGGATGTAACTACGAGC 1312
|| || | || ||||| ||||| | || |||||| ||||||||||||||| ||| |||
Sbjct 1273 TATCAA-AGCCCAAGATGTTTTGTCATTAGCACACAATGTAGCAGGATGTATCTATGAGT 1331
Query 1313 GCAACACCAATTGGGGATCCAAGATAGGGTTCAGGTACGGCTCATTAGTAGAAGACTACT 1372
||| |||||||||||||||||||| || ||||| || || |||||||||||||||||||
Sbjct 1332 ACAATACCAATTGGGGATCCAAGATTGGATTCAGATATGGGTCATTAGTAGAAGACTACT 1391
Query 1373 ACACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAGTATTTTGCAGCCCTAAAAAGG 1432
||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| |
Sbjct 1392 ACACAGGGTTTATGCTCCATTGTGAAGGATGGAGATCAGTATTTTGCAACCCAAAAAAAG 1451
Query 1433 CTGCATTTTATGGAGAGTCCCCAAAATGCCTAACTGATATAATAGGCCAACAAATCCGAT 1492
|||||||||||||||| |||||||| |||||| |||| | | || ||||||||||| |
Sbjct 1452 CTGCATTTTATGGAGATTCCCCAAAGTGCCTAGTTGATCTTGTGGGTCAACAAATCCGTT 1511
Query 1493 GGTCCGTTGGACTTCTT-GAAGTAACTTTTTCAAGGTACAACCCAATTACCTATGGATTG 1551
|| | ||||| ||| || ||| | | ||||||| ||| | |||||||||||||||| |
Sbjct 1512 GGGCAGTTGGGCTT-TTCGAAATGTCCTTTTCAAAGTATAGCCCAATTACCTATGGAATC 1570
Query 1552 AAGTCACTG-AGCCTATTAATGAGCTTAGGCTATTGCCACTATGCATTTTGGCCGTTTTG 1610
||||||||| | ||| |||||| | ||||| |||||| ||| | | ||| ||| |||||
Sbjct 1571 AAGTCACTGGA-CCTTTTAATGGGTTTAGGTTATTGCAACTCTCCGTTTAAGCCATTTTG 1629
Query 1611 GTCAATTCCTCTCGTC-GTCTATGGACTTTTACCCCAAG-TTGCCCTCATA-CATGGATT 1667
|||||||||||| | | ||||||||||||||||| || | |||| ||||| | |||| |
Sbjct 1630 GTCAATTCCTCT-GACCGTCTATGGACTTTTACCACA-GCTTGCACTCATTTC-TGGAGT 1686
Query 1668 TAGCGTCTTCCCCAAGGCATCGGATCCGTGGTTTTGGCTTTACATCATCTTGTT-TCTCG 1726
||| ||||||||||||||||| |||||||||||||||||||||||||| || || | | |
Sbjct 1687 TAGTGTCTTCCCCAAGGCATCTGATCCGTGGTTTTGGCTTTACATCATTTTATTCTTT-G 1745
Query 1727 GTGGAT-ACGCGCAAGATCTATCGGACTTTTTATTAGAAGGAGGAACTTATAGGAAATGG 1785
| || | | || ||||||||||| ||||||||||| ||||||||||||||| ||||||||
Sbjct 1746 G-GGCTTATGCCCAAGATCTATCAGACTTTTTATTGGAAGGAGGAACTTATCGGAAATGG 1804
Query 1786 TGGAACGATCAAAGGATGTGGATGGTAAGAGGACTTTCTTCTTTCTTCTTTGGTTTTACA 1845
|||||||||||||| |||| |||| ||| |||||| ||||| |||||||||||||||| |
Sbjct 1805 TGGAACGATCAAAGAATGTTGATGATAAAAGGACTCTCTTCATTCTTCTTTGGTTTTATA 1864
Query 1846 GAGTTCACTCTCAAAACCCTAAACCTCTCGACTC--AAGGATTCAACGTCACCAGTAAAG 1903
||||||| ||||||||||||||||||||| || | ||| |||||||||||||||||||
Sbjct 1865 GAGTTCATTCTCAAAACCCTAAACCTCTCCACACCTAAG--TTCAACGTCACCAGTAAAG 1922
Query 1904 CCAACGACGATAATGAACAAATGAAGCGGTACGAGCAAGAGATCTTTGATTTCGGGCCCT 1963
|||| || ||| | ||||| | |||||||||||||||||| |||||||||||||| |||
Sbjct 1923 CCAATGATGATGACGAACAGAGGAAGCGGTACGAGCAAGAAATCTTTGATTTCGGAACCT 1982
Query 1964 CTTCGTCCATGTTCTTGCCCATGACTACGGTCGCCATAGTGAATCTACTTGCTTTTGTAT 2023
|||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||||| |
Sbjct 1983 CTTCGTCCATGTTCTTGCCCTTGACCACGGTTGCCATAGTGAATCTGCTTGCTTTTGTCT 2042
Query 2024 GGGGAATTTATGTTATTTTCA-CTTGGGGAGAAGGACCCGT-CCTTGAACTGATGCTGGC 2081
|||| |||||| |||| || || | |||| || || | | |||||| ||||||||||
Sbjct 2043 GGGGGCTTTATGGTATTCTCTTCT-GCGGAGGAGAACTC-TACCTTGAGCTGATGCTGGT 2100
Query 2082 GAGTTTCGTGGTGGTAAATTGCTTACCGATCTATGAAGCCATGGTGTTGAGGATCGATGA 2141
||| |||| |||||| ||||||||||||||||| | || ||||||||||||| |||||
Sbjct 2101 GAGCTTCGCGGTGGTGAATTGCTTACCGATCTACGGGGCTATGGTGTTGAGGAAAGATGA 2160
Query 2142 CGGAAAATTAACATCAAGGATTTGTTTCTTAGCTGGGCTCCTC-ACTTTTGTTCTTACAG 2200
||||||||| || ||| | |||||||||||||||| |||| || || ||||||| |
Sbjct 2161 TGGAAAATTATCAAAAAGAACTTGTTTCTTAGCTGGGAACCTCCACGTTGGTTCTTATTG 2220
Query 2201 GGTCATGCTACTTCCTCCTCAAGTAACTTCACCA-TTAGGT 2240
|||| | |||||| |||||||||||||||||| ||||||
Sbjct 2221 TGTCAAGTTACTTCGTCCTCAAGTAACTTCACCCCTTAGGT 2261
> AT4G23990.1 | Symbols: ATCSLG3, CSLG3 | cellulose synthase like
G3 | chr4:12456489-12460753 FORWARD LENGTH=2513
Length=2513
Score = 2126 bits (1151), Expect = 0.0
Identities = 1868/2207 (85%), Gaps = 78/2207 (4%)
Strand=Plus/Plus
Query 83 CCCTCCACACGTGTCATCCCTGCCGGCGCGCCATTCCATACAGAATCTACGCCGTAATCC 142
||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| | |
Sbjct 97 CCCTCCACACGTGTCATCCTTGCCGGCGCACCATTCCATATAGAATCTACGCCGTATTTC 156
Query 143 ACACGTGTGGCATCATAGCCCTCATGTATCACCATGTACTCTCACTTCTCACAGCAAACA 202
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 157 ACACGTGTGGCATCATAGCCCTCATGTATCACCATGTACACTCACTTCTCACAGCAAAC- 215
Query 203 AC-ACTCTTATAACATGTCTTCTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGTA 261
|| ||||| || || | ||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 216 ACAACTCTAATCACGTCTCTCCTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGCA 275
Query 262 ACCACAACTTCCCTCCGGT-TAAACCCGGTTCACCGGACGGAGTACCCTGAGAAATATGC 320
||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||||||||
Sbjct 276 ACCACAACTTCCCTCCGGTATAAA-CCGGTTCGCCGGACCGAGTACCCTGAGAAATATGC 334
Query 321 AGCTAAACCGGAGGATTTTCCGAAGCTGGACGTGTTTATATGCACGGCTGATCCGTACAA 380
|||| |||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 335 AGCTGAACCGGAGGACTTCCCGAAACTGGACGTGTTTATATGCACGGCTGATCCGTACAA 394
Query 381 GGAGCCTCCGATGATGGTGGTTAACACCGCCTTATCTGTGATGGCCTATGAATATGCGTC 440
||||||||||||||||||||| ||||| |||||||| |||||||| || || ||| ||||
Sbjct 395 GGAGCCTCCGATGATGGTGGTCAACACTGCCTTATCGGTGATGGCTTACGAGTATCCGTC 454
Query 441 CGATAAGATCTCAGTCTATGTATCGGACGATGGAGGATCTTCATTGACTTTGTTTGCTCT 500
|||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||
Sbjct 455 CGATAAGATCTCAGTCTACGTATCGGACGATGGAGGTTCGTCGTTGACTTTGTTTGCTCT 514
Query 501 TATGGAGGCTGCCAAGTTCTCTAAGCGTTGGTTGCCCTTTTGCAAGAATAACAATGTTCA 560
||||||||| || ||||||||||||| ||||||||| ||||||||||| || ||||||||
Sbjct 515 TATGGAGGCAGCTAAGTTCTCTAAGCATTGGTTGCCTTTTTGCAAGAAGAATAATGTTCA 574
Query 561 AGATCGGTCCCCTGAAGTTTATTTCTCATCTGAGTCACAGT-CTCAGAGTGAGGAAGCTG 619
||||||||| |||||||||||||||||||| ||| || || ||| |||||| |||||||
Sbjct 575 AGATCGGTCTCCTGAAGTTTATTTCTCATCAAAGTTAC-GTTCTCGGAGTGATGAAGCTG 633
Query 620 AAAACCTTAAGCTGATGTACGAAGACATGAAGAGTAGAGTAGAAAATGTGGCCGAGAGTG 679
|||| | ||| |||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 634 AAAATATCAAGATGATGTACGAAGACATGAAGAGTAGAGTAGAACATGTGGTGGAGAGTG 693
Query 680 GAAAAGTTGAGACTGCATTTATCACATGCGATCAATTTCATGGGGTATTCGATTTGTGGA 739
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 694 GAAAAGTTGAGACTGCATTTATCACATGCGATCAATTTCGTGGGGTATTCGATTTGTGGA 753
Query 740 CAGATAAATTCACTCGTCATGACCATCCCACAATTATTCAGGTGCTACAACACAACGA-A 798
| || ||||||||||||||||||||||||||||||||||||||||||||| | | || |
Sbjct 754 CCGACAAATTCACTCGTCATGACCATCCCACAATTATTCAGGTGCTACAAAATAGTGAGA 813
Query 799 AC-AGATG-A-GATG--A-----T-------GCCAAACCTAATCTATGTTTCAAGAGAGA 841
| | ||| | ||| | | ||||||||||||||| |||||||||||||
Sbjct 814 ATGATATGGACGATACCAAAAAATATATAATGCCAAACCTAATCTACGTTTCAAGAGAGA 873
Query 842 AGAGTAAAGTTTCACCACATCATTAT-AAAGCCGGTGCTCTTAATACTTTGTTACGAGTA 900
|||||||||||||| ||||||||| | |||||||||||||||||||| ||| |||||||
Sbjct 874 AGAGTAAAGTTTCATCACATCATT-TCAAAGCCGGTGCTCTTAATACCTTGCTACGAGTG 932
Query 901 TCTGCCGTGATGACAAACTCACCAATCATTCTAACACTAGATTGTGACATGTACTCAAAC 960
|||| |||||||| || ||||| ||||||||||||||||| ||||| ||||| || |||
Sbjct 933 TCTGGAGTGATGACGAATTCACCGATCATTCTAACACTAGACTGTGATATGTATTCCAAC 992
Query 961 AATCCTA-CAACACCACTTCATGCTCTATGCTATTTGTCAGATCCTAAAATCAATTTTGG 1019
|||| | |||||||| ||| ||| || |||||||| |||| ||||||||||| |||
Sbjct 993 GATCC-AGCAACACCAGTTCGTGCCCTGTGCTATTTAACAGACCCTAAAATCAAAACTGG 1051
Query 1020 TTTAGGATTTGTGCAATTTCCTCAAAAATTTCAAGGAATAAACAAAAATGATATTTATGC 1079
|||||| |||||||| |||||||||| |||||||||||||| ||| || ||||| |||||
Sbjct 1052 TTTAGGGTTTGTGCAGTTTCCTCAAACATTTCAAGGAATAAGCAAGAACGATATATATGC 1111
Query 1080 AT-CGGAGCTCA-AA-CGCC-CATTTGACATCAACACGATTGGGTTTGATGGACTTAC-G 1134
|| || | | | || || | | ||||| ||||| | ||||||||||||||| ||| |
Sbjct 1112 ATGCGC-G-T-ATAAGCGTCTC-TTTGAGATCAATATGATTGGGTTTGATGGT-TTAATG 1166
Query 1135 GGCCC-AGTTCATATGGGAACTGGGTGTTTCTTCAATCGACG-GGCATTTTATGG-GCCT 1191
||||| | | ||| |||||||||| ||||||||||||||||| || |||||||| || |
Sbjct 1167 GGCCCGAAT-CATGTGGGAACTGGTTGTTTCTTCAATCGACGAGGT-TTTTATGGAGC-T 1223
Query 1192 CCCGCTAGTTTGATTTTGCCTGAGATAGAAAAACTTG-GACCAAATCGGATTGTCGATAT 1250
|| ||| ||| ||||||||||||||||| ||||| | |||| ||| ||||| ||||
Sbjct 1224 CCATCTAATTTAATTTTGCCTGAGATAGATGAACTTAAGCCCAA-TCGTATTGTAGATAA 1282
Query 1251 GTCC-ATTAA-GAACCAAGATATTTTGGCGTTGGCACAC-GATGTAGCAGGATGTAACTA 1307
| || || || | | ||||| |||| || ||||| ||| | |||||||||||||| |||
Sbjct 1283 G-CCTATCAATGCTC-AAGATGTTTTAGCATTGGCTCACCG-TGTAGCAGGATGTATCTA 1339
Query 1308 CGAGCGCAACACCAATTGGGGATCCAAGATAGGGTTCAGGTACGGCTCATTAGTAGAAGA 1367
||||| ||||||||||||||||| ||||| || ||||| || || || |||||||||||
Sbjct 1340 CGAGCTTAACACCAATTGGGGATCAAAGATTGGATTCAGATATGGGTCTTTAGTAGAAGA 1399
Query 1368 CTACTACACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAGTATTTTGCAG-CCCTA 1426
|||||||||||| | || ||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 1400 CTACTACACAGGGTATAGGCTCCATTGTGAAGGATGGAGATCAGTTTTTTGCAGACCC-A 1458
Query 1427 AAA-AGGCTGCATTTTATGGAGAGTCCCCAAAATGCCTAACTGATATAAT-AGGCCAACA 1484
||| || | ||||||| ||||| ||||||||| | |||| |||| || | || ||||||
Sbjct 1459 AAAGAG-CAGCATTTTGCGGAGATTCCCCAAAAAGTCTAATTGATGTAGTGAG-CCAACA 1516
Query 1485 AATCCGATGGTCCGTTGGACTTCTTGAAGTAACTTTTTCAAGGTACAACCCAATTACCTA 1544
|| ||||| || |||| ||||||||||| | | |||||||| | ||| ||||||||
Sbjct 1517 AAAGAGATGGGCCATTGGGCTTCTTGAAGTTGCCATCTCAAGGTATAGCCCCATTACCTA 1576
Query 1545 TGGAT-TGAAGTCACTGAGCCTATTAATGAGCTTAGGCTATTGCCACTATGCATTTTGG- 1602
||| | | || ||| || | ||| ||| | | |||||||||| || || |||| ||||
Sbjct 1577 TGG-TGTCAAATCAATGGGTCTAGTAACGGGAGTAGGCTATTGTCAATACGCATGTTGGG 1635
Query 1603 CCGTTTTGGTCAATTCCTCTCGTCGTCTATGGACTT-TTACCCCAAGTTGCCCTCATACA 1661
|| ||||||||| ||||||| ||||||||||| || || |||||| |||| ||| | |
Sbjct 1636 CC-TTTTGGTCACTTCCTCTTATCGTCTATGGA-TTCTTGCCCCAACTTGCTCTCCTTTA 1693
Query 1662 TGGATTTAGCGTCTTCCCCAAGGCATCGGATCCGTGGTTTTGGCTTTACATCATCTTGTT 1721
| || ||||||||| |||||| |||| ||||| |||||||||||||||||| | |||||
Sbjct 1694 TCAATCTAGCGTCTTTCCCAAGTCATCAGATCCATGGTTTTGGCTTTACATCGTTTTGTT 1753
Query 1722 TCTCGGTGGATACGCGCAAGATCTA-TCGGACTTTTTATTAGAAGGAGGAACTTATAG-G 1779
||||||| ||| | |||||||||| ||| ||||| |||||||||||||||||||| | |
Sbjct 1754 CCTCGGTGCATATGGGCAAGATCTACTCG-ACTTTGTATTAGAAGGAGGAACTTATGGCG 1812
Query 1780 AAATGGTGGAACGATCAAAGGATGTGGATGG-TAAGAGGACTT-TCTTCTTTCTTCTTTG 1837
| ||||||||||||||||| |||||| | | |||||||| || ||||| | | ||||
Sbjct 1813 GA-TGGTGGAACGATCAAAGAATGTGG-TCGATAAGAGGA-TTCTCTTCACACCTATTTG 1869
Query 1838 GTTTTACAGAGTTCACTCTCAAAACCCTAAACCTCTCGACTCAAGGATTCAACGTCACCA 1897
| || | |||||||||||| ||||||||||||||||| || || |||||||||||||| |
Sbjct 1870 GCTTCATAGAGTTCACTCTTAAAACCCTAAACCTCTCCACGCATGGATTCAACGTCACAA 1929
Query 1898 GTAAAGCCAACGACGAT-AATGAACAAATG-AAGCGGTACGAGCAAGAGATCTTTGATTT 1955
| ||||||||||| || || ||||||| | ||| |||| ||| ||||||| ||||| ||
Sbjct 1930 GCAAAGCCAACGATGACGAA-GAACAAA-GCAAGAGGTATGAGAAAGAGATTTTTGAGTT 1987
Query 1956 CGGGCCCTCTTCGTCCATGTTCTTGCCCATGACTACGGTCGCCATAGTGAATCTACTTGC 2015
||| |||||||||||||||||||||||| |||||||||| ||||| || || || |||||
Sbjct 1988 CGGCCCCTCTTCGTCCATGTTCTTGCCCTTGACTACGGTTGCCATCGTTAACCTCCTTGC 2047
Query 2016 TTTTGTATGGGGAATTTATGTTATTTTCACTTGGGGAGAAGGACCCGTCCTTGAACTGAT 2075
|||||| ||||| |||||| | ||||| ||||||||||||||| ||||||||| |||||
Sbjct 2048 TTTTGTCTGGGGGCTTTATGGTCTTTTCGCTTGGGGAGAAGGACTCGTCCTTGAGCTGAT 2107
Query 2076 GCTGGCGAGTTTCGTGGTGGTAAATTGCTTACCGATCTATGAAGCCATGGTGTTGAGGAT 2135
|||||||||||||| |||||| || ||||| ||||||||||| || ||||||||||||||
Sbjct 2108 GCTGGCGAGTTTCGCGGTGGTGAACTGCTTGCCGATCTATGAGGCTATGGTGTTGAGGAT 2167
Query 2136 CGATGACGGAAAATTAACATCAAGGATTTGTTTCTTAGCTGGGCTCCTCACTTTTGTTCT 2195
|| || ||||||||| || |||| |||||||| ||||||| ||||||| ||||| ||
Sbjct 2168 AGACGATGGAAAATTACCAAAAAGGGTTTGTTTCGTAGCTGGAATCCTCACATTTGTGCT 2227
Query 2196 TACAGGGTCATGCTACTTCCTCCTCAAGTAACTTCACC-ATTA-GGT 2240
| | |||| | ||| || ||||||||||||| ||| |||| |||
Sbjct 2228 GATTGTGTCAGGTTACGTCTTCCTCAAGTAACTGGACCCATTATGGT 2274
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 113453231700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5