BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492476 Length=1132 Score E Sequences producing significant alignments: (Bits) Value AT4G23895.1 | Symbols: | Pleckstrin homology (PH) domain-conta... 1653 0.0 > AT4G23895.1 | Symbols: | Pleckstrin homology (PH) domain-containing protein | chr4:12422105-12424363 FORWARD LENGTH=1144 Length=1144 Score = 1653 bits (895), Expect = 0.0 Identities = 1069/1150 (93%), Gaps = 24/1150 (2%) Strand=Plus/Plus Query 1 GAAGCAGTAAGCACCCAACCaaaaaaaCAATTGCGTCAAAACACTTTCCCGTAAATACAG 60 |||||||||||||| ||||||||||| ||||||||| |||||||||||| | ||||||| Sbjct 1 GAAGCAGTAAGCACTCAACCAAAAAACCAATTGCGT--AAACACTTTCCCTTGAATACAG 58 Query 61 AGATCACATTCGATCAGCGAGCTGATTTCT--C-------ATCAAAATTTCCGGTGAAGT 111 |||||||||||||||||||||||||||||| | ||||||||||| |||||||| Sbjct 59 AGATCACATTCGATCAGCGAGCTGATTTCTCACAAGGGATATCAAAATTTCTGGTGAAGT 118 Query 112 GGGGTTGTAAAATTCGGCGTTGAAAGATATaaaaaaaGTGAAAGTTTCTGGAGTCGTTTC 171 ||| ||||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||| Sbjct 119 GGGATTGTAAAATTCGGCGTTGAAAGATATATAAAGAGTGGAAGGTTCTGGAGTCGTTTC 178 Query 172 AATTCATGGATGATAGTACTCCTAAGAAGCTAAACATATTACCTGATCACTTTAGTGCTC 231 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 AATTCATGGATGATGGTACTCCTAAGAAGCTAAACATATTACCTGATCACTTTAGTGCTC 238 Query 232 CTAGTTCCACAGCAGAATCTTCTCAGGACGATACTCCATCATTTTCGCAGACAAAGGACG 291 ||||| |||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct 239 CTAGTCCCACAGCAGAATCTTCTCAGCACGATACTCCATCATCTTCGCAGCCAAAGGACG 298 Query 292 ATATTTCTCTGAGGTCTCGTAGCCAGTCACGGACTCGTAGAAACTTGAAAAGAGCAGCAA 351 ||| |||||||||| || |||||||||||||||||| |||||| ||||||||||||||| Sbjct 299 ATAGTTCTCTGAGGCCTTATAGCCAGTCACGGACTCGCAGAAACCTGAAAAGAGCAGCAA 358 Query 352 CTATGTTGAATTTGTTCACTCTTCGCCGTCTTCCTTGGGTTTCAGATGGTCAAGAGAAGG 411 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 359 CTATGTTGAATTTGTTCACTCTTCGCCGTCTGCCTTGGGTTTCAGATGGTCAAGAGAAGG 418 Query 412 TAGAGCTGTCAGCAGCGGAGTTAGAATCACTTAGATCAGAGCTTTCTGATTTGGAAGAAA 471 | ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 419 TCGAGCTATCAGCAGCGGAGTTAGAATCACTTAGATCAGAACTTTCTGATATGGAAGAAA 478 Query 472 GAGAAGCTTACCTCAAAGCTCAGTTGGAACATGTAGACGAAGTCTTGCGCTCTGCTCGTT 531 ||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct 479 GAGAAGCTTACCTCAAAGCCCAGTTGGAACATGTGGATGAAGTCTTGCGCTCTGCCCGTT 538 Query 532 TATCTGGTTATTTGTTTATCAGAAGTCGTTGGGCAGCTCTTCCGGGGGAACCACCACCAA 591 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 539 TATCTGGTTATTTGTTTATCAGAAGTCGTTGGGCAGCTCTTCCGGGTGAACCACCACCAA 598 Query 592 TAGACGATACAGAAGTAGACGACTGGCTTCCTCGGTTTGTCGTCCTTCAAGGCCCTTGTC 651 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 TAGATGATACAGAAGTAGACGACTGGCTTCCTCGGTTTGTCGTCCTTCAAGGCCCTTGTC 658 Query 652 TTTTCTTCTATTTATTGTCAACAGACTTGAGCCCGCAAGATTCGACATTGCTGGCGGATA 711 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct 659 TTTTCTTCTATTTATTGTCAACAGACTTGAGCCCTCAAGATTCGACATTGCTAGCAGATA 718 Query 712 TTGTAGAAGTTGGTTCGTTACCAAGCTACACGAGAGAATTCGATGAAACCCATTATTGCT 771 |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 719 TTGTTGAAATTGGTTCGGTACCAAGCTACACGAGAGAATTCGATGAAACCCATTATTGCT 778 Query 772 TTTACATCTTAACCCGTCAAGGTCTAAGATTTGAGTGCTCAAGCACCTCTAAAACACAGG 831 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 779 TTTACATATTAACCCGTCAAGGTCTAAGATTTGAGTGCTCAAGCACCTCTAAAACACAGG 838 Query 832 TTGATTCGTGGTTGTCGGTATTGCGCCTTGATTGCAAGTCTGAACCAGAAGAAAGGTTAC 891 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 839 TTGATTCGTGGTTGTCGGTTTTGCGCCTTGATTGCAAGTCTGAACCAGAAGAAAGGTTAT 898 Query 892 CAAACGGATCAAG-CGAAGCGCCACAATAAATTGAAGATTGGTCATTGCTCTGTATAGTT 950 |||| |||||| | |||||| ||| ||||||||||||| ||||| ||||||| |||||| Sbjct 899 CAAATGGATCA-GTCGAAGCTCCAGAATAAATTGAAGAGCGGTCACTGCTCTGGATAGTT 957 Query 951 TTCATTTTCTGTGTATATAATATGCTTCTTTT-AGATGTAGCAGAATTCACGTCAATGAA 1009 ||||||| | |||||||||| ||||||||| |||||||| |||||||||||||||||| Sbjct 958 TTCATTTA-TATGTATATAAT--GCTTCTTTTTAGATGTAGTAGAATTCACGTCAATGAA 1014 Query 1010 AGGTTCTTTTACTGAACTGGTGATTACAAtttttttGATTTACTTCTTTTAGCTGCTAAA 1069 |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| Sbjct 1015 AGGTTCTTTTACTGAACTGGTGGTTACAATATTTTTGGTTTACTTCTTTTAGCTGCTAAA 1074 Query 1070 GACATTGGAATATATTCGTTACTTGAATAGGCAATA-TT---G--GAAAAAGAAA-GTGA 1122 |||||||||||||||||||| ||||||||||||||| || | | |||| ||| |||| Sbjct 1075 GACATTGGAATATATTCGTTTCTTGAATAGGCAATAATTCTAGTTGGAAAACAAAAGTGA 1134 Query 1123 TTAGAAAGGC 1132 |||||||||| Sbjct 1135 TTAGAAAGGC 1144 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55521802770 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5