BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492478 Length=1005 Score E Sequences producing significant alignments: (Bits) Value AT4G23882.1 | Symbols: | Heavy metal transport/detoxification ... 1304 0.0 > AT4G23882.1 | Symbols: | Heavy metal transport/detoxification superfamily protein | chr4:12417553-12418893 FORWARD LENGTH=1081 Length=1081 Score = 1304 bits (706), Expect = 0.0 Identities = 923/1024 (90%), Gaps = 30/1024 (3%) Strand=Plus/Plus Query 1 GATTTCGTTCGTGGATATTCAACAAATGACGTTACATTTGATTATGAAGATACCAAGTAC 60 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 3 GATTTCGTACGTGGATATTCAACAAATGACGTTACACTTGATTATGAAGATACCAAGTAC 62 Query 61 AATATCaaaaaaaTATGGAAACCATGCTA-ATATACA--CCAATTCCAGCAATATATCAA 117 |||||||| | || ||||||| || || | || || | || |||||||||||||||| Sbjct 63 AATATCAAGAGAACATGGAAA-GTTG-TATAAATTCAGGCGAA-TCCAGCAATATATCAA 119 Query 118 AACGTCTATGGACTCATTTTGGAAAGTAAATAATCAT-ATACCCATTGTCTTCTTTTACA 176 |||||||||||||||||||| |||||||| | ||| | ||| || ||| |||| |||| Sbjct 120 AACGTCTATGGACTCATTTTTGAAAGTAACTTATC-TCATATTTATAGTCGTCTTCTACA 178 Query 177 TTAGAGTTTCAAGTTGAGGTGCTTTTATGCAATGTCAAACCTATCTCCACCAGTTCGAAC 236 |||||||||||||| |||||| |||||||||| |||||||||||||||| |||||||| Sbjct 179 TTAGAGTTTCAAGTAAAGGTGC--TTATGCAATGGCAAACCTATCTCCACCCGTTCGAAC 236 Query 237 TTGCGTTCTGAGAGTTGGAATCAAGTGTTGCAAAGGTTGCCAGACCAAAGCAAAGAGAAA 296 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 237 TTGCGTTCTGAGAGTTGGAATCAAGTGTTGCAAAGGCTGCCAGACAAAAGCAAAGAGAAA 296 Query 297 GTTGCTAAATGTCTCTGGGGTGGA-TGCAGTTGAGTATAACGCAGAACAAGGGCTCTTAA 355 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| | Sbjct 297 GTTGCTAAATGTCTCTGGGGT-GAGTACAGTTGAGTATAACGCAGAACAAGGGCTCTTGA 355 Query 356 CAGTCTCAGGTGATGTTAACCCAACAACATTGCTTCATAAGCTTACCAAATGGGGTAAAA 415 ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||| Sbjct 356 CAGTCACAGGTGATGCCAACCCAACAACATTGCTTCATAAGCTTACGAAATGGGGCAAAA 415 Query 416 AGGCAGAACTTGTCTCTTTTCTTGGAGAC-A--ACTCTTCCTTTGTTCCTAGAACCCCAG 472 |||||||||| |||||||||||||||||| | |||||||| ||||||||||||||| | Sbjct 416 AGGCAGAACTAGTCTCTTTTCTTGGAGACAACTACTCTTCCCATGTTCCTAGAACCCCGG 475 Query 473 AACAAAACCAAAACAAGACAATGGAGAAGAAGGAGGAGAAGCCAACAAAATGTTGTCTTC 532 ||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct 476 AACAAAACCAAAACAAGACAATGGAGAAGAAAAAGAAGAAGCCAACAAAGTGTTGTCTTC 535 Query 533 TAATGTGTTTTGG-GA-AA-AGAAGCAAGAACACAAAGGTTGAGCCTATGGCGATGCCAA 589 ||||||||||||| | || |||||||||||||||||| |||||||||||||||| |||| Sbjct 536 TAATGTGTTTTGGAAATAAGAGAAGCAAGAACACAAAGATTGAGCCTATGGCGATACCAA 595 Query 590 ACTGG-AACTATCGAGGAATAGGGACA-GAAAACGGGAATGCCACGCCCTTCATTAACGC 647 ||||| || ||||||||| || ||| | ||||| || ||||||| ||| ||||||||||| Sbjct 596 ACTGGCAA-TATCGAGGAGTA-GGAAATGAAAATGGCAATGCCAGGCCTTTCATTAACGC 653 Query 648 TGCAATGTCACCTCCAATGGTGTACCCTCCTCCACAAGCAGTGCCTGGCTTTAAAACACC 707 ||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct 654 GGCAATGTCACCTCCAATGGTGTATCCTCCTCCACAAGCAGTGCCTGGCTTCACAACACC 713 Query 708 CATACCATACCCTCCTCCTAATTATTTT-GGGGCAAGACAACCACCACCATACACTGGTG 766 |||||||||||||||||||| || |||| || ||||| |||||||||||||||||||| Sbjct 714 CATACCATACCCTCCTCCTAGTTTTTTTCCAGG-AAGACCACCACCACCATACACTGGTG 772 Query 767 CTGGTATGTTCCAGTCAGCTCCACCACAATCCCCACCATATTTTCCAGTTCCCAATTCTA 826 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 773 CTGGTATGTTCCAGTCAGCTCCACCACAATCCCCACCATATTTTCCAGTTCCCAACCCTA 832 Query 827 GGCTGCATTACCCGCACCACTGACAAAGTTCTTTCAGACGATACATTTATTGCTTGTT-C 885 ||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |||| | Sbjct 833 GGCTGCATTACCCGCACCACTGATACAGTTCTTTCAGACGATACATTCATTGCCTGTTTC 892 Query 886 TTCTCTTTAGCTATGACTCAA-TGCTGAGTAATAAGATGATG--AA-TTCTTTTCAACAT 941 ||||||| ||||||||||||| ||||||||||||| | |||| || ||||||||||||| Sbjct 893 TTCTCTT-AGCTATGACTCAAATGCTGAGTAATAATAAGATGGTAAATTCTTTTCAACAT 951 Query 942 GTAAGGGATATGAAGAAATGCAAATGAATGATTTCCAAAAGAAAGCAGACTAGAAAACAT 1001 |||||| |||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct 952 GTAAGGTATATGAAGAAATGCAAATGAATGATTTCCACAATAAGGCAGACTAGAAAACAC 1011 Query 1002 ATAT 1005 |||| Sbjct 1012 ATAT 1015 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49229464060 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5