BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492484
Length=2215
Score E
Sequences producing significant alignments: (Bits) Value
AT4G23850.1 | Symbols: LACS4 | AMP-dependent synthetase and lig... 3408 0.0
AT4G11030.1 | Symbols: | AMP-dependent synthetase and ligase f... 1716 0.0
> AT4G23850.1 | Symbols: LACS4 | AMP-dependent synthetase and ligase
family protein | chr4:12403454-12408335 REVERSE LENGTH=2339
Length=2339
Score = 3408 bits (1845), Expect = 0.0
Identities = 2035/2127 (96%), Gaps = 11/2127 (1%)
Strand=Plus/Plus
Query 21 agagagagagagaTCGATCATGTCGCAGCAGAAGAAATTCATCTTCCAGGTTGAGGAAGG 80
||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct 54 AGAGAGAGAGAGAGAGATCATGTCGCAGCAGAAGAAATACATCTTCCAAGTTGAAGAAGG 113
Query 81 CAAAGAAGGTAGCGATGGAAGACCATCAGTCGGACCAGTGTACCGGAGTATCTACGCCAA 140
|||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||
Sbjct 114 CAAAGAAGGTAGCGATGGAAGACCATCAGTTGGTCCAGTGTACCGGAGTATCTTTGCCAA 173
Query 141 GGACGGATTTCCCGAGCCGATCGAAGGAATGGATAGTTGTTGGGATGTTTTCCGTATGTC 200
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 174 GGACGGATTTCCCGACCCGATCGAAGGAATGGATAGTTGTTGGGATGTTTTCCGCATGTC 233
Query 201 TGTTGAGAAATATCCAAACAATCCAATGCTGGGACGCCGTGAGATTGTAGACGGGAAGCC 260
||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 234 TGTTGAGAAGTATCCAAACAATCCAATGCTGGGACGCCGCGAGATTGTAGATGGAAAGCC 293
Query 261 GGGTAAGTATGTCTGGCAAACATACCAAGAAGTCTACGACATTGTCATAAAACTTGGAAA 320
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 294 GGGTAAGTATGTCTGGCAAACATACCAAGAAGTCTACGACATTGTCATGAAACTTGGAAA 353
Query 321 TTCTCTCCGAAGTGTTGGAGTTAAGGACGAAGCAAAATGTGGTATCTATGGTGCAAATTC 380
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 354 TTCTCTCAGAAGTGTTGGAGTTAAGGACGAAGCAAAATGTGGTATCTATGGTGCAAATTC 413
Query 381 TCCTGAGTGGATTATCAGCATGGAGGCTTGTAATGCACATGGACTCTATTGTGTACCGTT 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 TCCTGAGTGGATTATCAGCATGGAGGCTTGTAATGCACATGGACTCTATTGTGTACCGTT 473
Query 441 ATATGATACACTAGGTGCT-AGTGCTGTGGAATTCATTATTTCCCATTCAGAGGTTTCAA 499
||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||
Sbjct 474 ATATGATACACTAGGTGCTGA-TGCTGTGGAATTCATCATTTCCCATTCAGAGGTTTCAA 532
Query 500 TTGTTTTTGTGGAAGAGAAGAAGATCTCTGAGTTGTTTAAGACATGCCCAAACTCGACAG 559
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 533 TTGTCTTTGTGGAAGAGAAGAAGATCTCTGAGTTGTTCAAGACATGCCCAAACTCGACAG 592
Query 560 AGTACATGAAAACTGTTGTGAGCTTCGGTGGTGTCTCACGTGAACAAAAAGAAGAAGCTG 619
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 593 AGTACATGAAAACTGTTGTGAGCTTCGGGGGTGTCTCACGTGAACAAAAAGAAGAAGCTG 652
Query 620 AAACTTTTGGGTTGGTTATATATGCTTGGGATGAATTTTTGAAGCTGGGTGAAGGAAAGC 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 AAACTTTTGGGTTGGTTATATATGCTTGGGATGAATTTTTGAAGCTGGGTGAAGGAAAGC 712
Query 680 AATATGATCTCCCCATCAAAAAGAAAAGTGACATTTGCACGATTATGTATACGAGTGGAA 739
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 713 AATATGATCTCCCAATCAAAAAGAAAAGCGACATTTGCACGATTATGTATACGAGTGGAA 772
Query 740 CCACTGGTGACCCAAAGGGAGTGATGATATCTAACGAAAGCATTGTTACTCTAATCGCTG 799
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 773 CCACTGGTGACCCAAAGGGAGTGATGATATCTAACGAAAGCATTGTGACTCTAATCGCTG 832
Query 800 GAGTGATCCGTCTACTGAAAAGTGCTAACGTAG-CTCTGACTGTGAAAGATGTGTTTCTT 858
|||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||
Sbjct 833 GAGTGATCCGTCTACTGAAAAGTGCTAACG-AGGCTCTGACTGTGAAAGATGTGTATCTT 891
Query 859 TCTTATCTTCCTCTTGCCCACATCTTTGACCGAGTGATCGAGGAGTGTTTCATTCAACAT 918
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 892 TCTTATCTTCCTCTTGCCCACATCTTTGACCGAGTTATCGAGGAGTGTTTCATTCAACAT 951
Query 919 GGTGCTGCAATTGGCTTCTGGCGTGGGGATGTAAAATTGTTGATTGAAGACCTTGGTGAG 978
||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||
Sbjct 952 GGTGCTGCAATTGGCTTCTGGCGAGGGGATGTAAAATTGTTGATCGAAGACCTTGCTGAG 1011
Query 979 CTTAAACCAACTATTTTTTGTGCTGTACCTCGTGTCCTCGATAGAGTATACTCAGGTCTT 1038
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1012 CTTAAACCAACTATTTTTTGTGCTGTACCTCGTGTCCTGGATAGAGTATACTCAGGTCTT 1071
Query 1039 CAGAAGAAGCTTTCTGATGGTGGATTCTTAAAAAAGTTGTTGTTTGATTCTGCATTTTCC 1098
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 1072 CAGAAGAAGCTTTCTGATGGTGGATTCTTAAAAAAGTTCATATTTGATTCTGCATTTTCC 1131
Query 1099 TATAAATTTGGACATATGAAGAAGGGAAAGTCTCATGCGGAGGCCTCTCCACTTTGTGAC 1158
||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||||
Sbjct 1132 TATAAATTTGGTTATATGAAGAAGGGACAGTCTCATGTGGAGGCCTCTCCACTTTTTGAC 1191
Query 1159 AAACATGTATTCAGCAAGGTTAAACAAGGACTCGGAGGCAATGTAAGGATTATTCTATCT 1218
|||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1192 AAACTTGTGTTCAGCAAGGTTAAACAAGGACTCGGAGGCAATGTGAGGATTATTCTATCT 1251
Query 1219 GGAGCTGCTCCTCTTGCTAGCCACGTAGAGTCATTTCTTAGAGTGGTGGCATGCTGTCAT 1278
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1252 GGAGCTGCTCCTCTTGCTAGTCACGTAGAGTCATTTCTAAGAGTGGTGGCATGCTGTCAT 1311
Query 1279 GTTTTACAAGGATACGGTCTCACTGAAAGCTGTGCTGGAACTTTTGTCTCGCTGCCAGAC 1338
||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1312 GTTCTCCAAGGATACGGTCTTACTGAAAGCTGTGCTGGAACTTTTGTCTCGCTGCCAGAT 1371
Query 1339 GAACT-GGACATGCTCGGCACAGTTGGTCCACCAGTGCCAAACGTTGATATACGCCTTGA 1397
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 GAACTAGGT-ATGCTCGGCACAGTTGGTCCACCAGTGCCAAACGTTGATATACGCCTTGA 1430
Query 1398 ATCTGTCCCCGAGATGGAATATGATGCTCTTGCAAGTACTCCACGTGGTGAAATCTGCAT 1457
||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 1431 ATCCGTCCCCGAGATGGAATATGATGCTCTTGCGAGTACTGCACGTGGTGAAATCTGCAT 1490
Query 1458 TCGGGGAAAGACCCTTTTCTCTGGTTACTACAAACGTGAAGACCTCACAAAAGAGGTTCT 1517
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1491 TCGGGGAAAGACCCTTTTCTCTGGTTACTACAAACGTGAAGATCTCACGAAAGAGGTTCT 1550
Query 1518 CATTGATGGATGGCTGCACACAGGTGATGTTGGTGAGTGGCAACCAAATGGAAGCATGAA 1577
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1551 CATTGATGGATGGCTGCACACAGGTGATGTTGGTGAGTGGCAACCAGATGGAAGCATGAA 1610
Query 1578 GATAATTGACAGGAAGAAGAATATCTTTAAACTGTCACAAGGAGAGTATGTTGCGGTCGA 1637
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1611 GATAATTGACAGGAAGAAGAATATCTTTAAACTCTCACAAGGAGAGTATGTTGCGGTGGA 1670
Query 1638 GAACATAGAAAACATCTATGGTGAAGTACAAGCTGTTGATTCCGTGTGGGTGTACGGGAA 1697
||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1671 GAACATAGAAAACATATACGGTGAAGTACAAGCTGTTGATTCCGTGTGGGTGTACGGTAA 1730
Query 1698 CAGCTTTGAGTCCTTCCTAGTCGCTATCGCCAACCCAAACCAGCAAATCCTTGAACGCTG 1757
||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||
Sbjct 1731 CAGCTTTGAGTCCTTCCTAATAGCTATCGCCAACCCAAACCAGCATATCCTTGAACGCTG 1790
Query 1758 GGCTGCAGAAAACGGTGTGAGCGGTGACTACAACGCTCTCTGTCAAAATGAAAAGGCAAA 1817
||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1791 GGCTGCAGAAAACGGTGTGAGTGGTGACTATGACGCTCTCTGTCAAAATGAAAAGGCAAA 1850
Query 1818 GGATTTCATACTTGGAGAACTTGTTAAAATGGCCAAAGAGAAAAAGATGAAGGGGTTTGA 1877
||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1851 GGAATTCATTCTCGGAGAACTTGTTAAAATGGCCAAAGAGAAAAAGATGAAAGGGTTCGA 1910
Query 1878 GATCATCAAGGCGATTCATCTTGACCCAGTGCCGTTTGACATGGAACGCGATCTTCTTAC 1937
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1911 GATCATCAAGGCGATTCATCTTGACCCAGTGCCATTTGACATGGAACGAGATCTTCTTAC 1970
Query 1938 GCCGACCTTCAAAAAGAAAAGGCCTCAGTTACTGAAATACTACCAGAGTGTGATCGATGA 1997
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1971 GCCGACCTTCAAAAAGAAAAGGCCTCAGTTGCTGAAATACTACCAGAGTGTGATCGACGA 2030
Query 1998 AATGTACAAGACCACAAATGAAAAATTAGCTTCCAGAGGGTAGATTCCTCCTCACTCTCG 2057
|||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 2031 AATGTACAAGACCATAAATGCAAAATTTGCTTCCAGAGGGTAGATTCCTCCTCACTCTCG 2090
Query 2058 GTGGTCTTTGGGTCTC--ATTTTGCACGACGAAGACTTTGTTAATAGGCTCTTTTCTCAT 2115
|| ||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct 2091 GTC--CTT-GGGTCTCTCATTTTGCATGACGAAGACTTTGTTAATAGGCTCTTCTCTCAT 2147
Query 2116 CTGTGTACAATATTTGGATATTTCATA 2142
|||||||||||||||| ||||||||||
Sbjct 2148 CTGTGTACAATATTTGAATATTTCATA 2174
Score = 62.1 bits (33), Expect = 2e-08
Identities = 37/39 (95%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 2177 GAATGTTATCAAACTTTTCTTTTTAATAAAATTTTAAAA 2215
||||| |||| ||||||||||||||||||||||||||||
Sbjct 2287 GAATGCTATCTAACTTTTCTTTTTAATAAAATTTTAAAA 2325
> AT4G11030.1 | Symbols: | AMP-dependent synthetase and ligase
family protein | chr4:6738120-6742229 FORWARD LENGTH=2001
Length=2001
Score = 1716 bits (929), Expect = 0.0
Identities = 1594/1914 (83%), Gaps = 50/1914 (3%)
Strand=Plus/Plus
Query 143 ACGGATTTCCCG-AGCCGATCGAAGGAATGGATAGTTGTTGGGATGTTTTCCGTATGTCT 201
||||| |||||| | |||||||| || || | || || |||||| ||||||| | | ||
Sbjct 104 ACGGA-TTCCCGAACCCGATCGATGGTATCCAAAGCTGCTGGGATATTTTCCGCACGGCT 162
Query 202 GTTGAGAAATATCCAAACAATCCAATGCTGGGACGCCGTGAGATTGTAG-ACGGGAAGCC 260
|||||||| ||||||||||||| |||||| || |||||||||||| | | |||||||| |
Sbjct 163 GTTGAGAAGTATCCAAACAATCGAATGCTTGGTCGCCGTGAGATT-TCGAACGGGAAGGC 221
Query 261 GGGTAAGTATGTCTGGCAAACATACCAAGAAGTCTACGACATTGTCATAAAACTTGGAAA 320
|| ||||| || ||| |||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 222 AGGAAAGTACGTGTGGAAAACATACAAAGAAGTATACGACATTGTCATAAAACTTGGAAA 281
Query 321 TTCTCTCCGAAG-TGTTGGAGTTAAGGACGAAGCAAAATGTGGTATCTATGGTGCAAATT 379
|||||| || || || ||| ||||||| | || |||||||||||| |||||| |||||
Sbjct 282 TTCTCTACGTAGTTGCGGGA-TTAAGGAGGGAGAAAAATGTGGTATATATGGTATAAATT 340
Query 380 CTCCTGAGTGGATTATCAGCATGGAGGCTTGTAATGCACATGGACTCTATTGTGTACCGT 439
| ||||||||| || ||||||||||| |||||||||||||| || |||||||| || |
Sbjct 341 GTTGTGAGTGGATCATTAGCATGGAGGCATGTAATGCACATGGCCTTTATTGTGTCCCTT 400
Query 440 TATATGATACACTAGGTGCTAGTGCTGTGGAATTCATTATTTCCCATTCAGAGGTTTCAA 499
|||| ||||| |||| ||| |||| ||||||||||| ||||| ||| ||||||||||||
Sbjct 401 TATACGATACGTTAGGCGCTGGTGCAGTGGAATTCATCATTTCTCATGCAGAGGTTTCAA 460
Query 500 TTGTTTTTGTGGAAGAGAAGAAGATCTCTGAG-TTGTTTAAGACATGCCCAAACTCGACA 558
||| ||| ||||| |||||||||||| ||||| || |||||||| || |||||||| |||
Sbjct 461 TTGCTTTCGTGGAGGAGAAGAAGATCCCTGAGCTT-TTTAAGACTTGTCCAAACTCAACA 519
Query 559 GAGTACATGAAAACTGTTGTGAGCTTCGGTGGTGTCTCA-CGTGAACAAAAAGAAGAAGC 617
| || ||||| |||||||||||||| || |||||| | || |||||||||||||||||
Sbjct 520 AAATATATGAAGACTGTTGTGAGCTTTGGCGGTGTCAAACCG-GAACAAAAAGAAGAAGC 578
Query 618 TGAAACTTTTGGG-TTGGTTATATATGCTTGGGATGAATTTTTGAAGCTGGGTGAAGGAA 676
||||| ||||| ||||| ||| || | |||||||| ||||||||||||||||| || |
Sbjct 579 TGAAA-AATTGGGATTGGTAATACATTCGTGGGATGAGTTTTTGAAGCTGGGTGAGGGTA 637
Query 677 AGCAATATGATCTCCCCATCAAAAAGAAAAGTGACATTTGCACGATTATGTATACGAGTG 736
|||||||||| || ||||| |||||| ||| ||||| ||||||||||||||||| || |
Sbjct 638 AGCAATATGAGCTTCCCATTAAAAAGCCAAGCGACATATGCACGATTATGTATACTAGCG 697
Query 737 GAACCACTGGTGACCCAAAGGGAGTGATGATATCTAACGAAAGCATTGTTACTCTAATC- 795
|||| ||||||||||| |||||||| ||||| || || ||||||||||||||| ||| |
Sbjct 698 GAACAACTGGTGACCCGAAGGGAGTTATGATTTCAAATGAAAGCATTGTTACTATAA-CT 756
Query 796 GCTGGAGTGATCCGTCTACT--GAAAAGTGCTAACG-TAGCTCTGA-CTGTGAAAGATGT 851
|||||||||| | | | || | || ||| || | ||| || | ||| ||| |||||
Sbjct 757 ACTGGAGTGATGCATTTCCTAGGGAATGTG--AATGCAAGC-CT-ATCTGAGAAGGATGT 812
Query 852 GTTTCTTTCTTATCTTCCTCTTGCCCACATCTTTGACCGAGTGATCGAGGAGTGT-TTCA 910
|| | |||||||||||||||| || ||| ||||||| || | |||||||| ||| || |
Sbjct 813 GTATATTTCTTATCTTCCTCTCGCGCACGTCTTTGATCGGGCAATCGAGGAATGTATT-A 871
Query 911 TTCAACAT-GGTGCTGCAATTGGCTTCTGGCGTGGGGATGTAAAATTGTTGATTGAAGAC 969
||||| | |||| | ||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct 872 TTCAA-GTAGGTGGTTCAATTGGTTTCTGGCGCGGGGATGTCAAATTGTTGATTGAAGAC 930
Query 970 CTTGGTGAGCTTAAACCAACTATTTTTTGTGCTGTACCTCGTGTCCTCGATAGAGTATAC 1029
||||||||||| ||||||| ||| ||||| || || ||||||||||| ||| ||||||||
Sbjct 931 CTTGGTGAGCTAAAACCAAGTATCTTTTGCGCCGTTCCTCGTGTCCTAGATCGAGTATAC 990
Query 1030 TCAGGTCTTCAGAAGAAGCTTTCTGATGGTGGATTCTTAAAAAAGTTGTTGTTTGAT-TC 1088
|||| || ||| |||| || |||| |||||| ||||| |||||| | |||||||| |
Sbjct 991 ACAGGACTACAGCAGAAACTATCTGGTGGTGGTTTCTTCAAAAAGAAGGTGTTTGATGT- 1049
Query 1089 TGCATTTTCCTATAAATTTGGACATATGAAGAAGGGAAAGTCTCATGCGG-AGGCCTCTC 1147
||| |||||||||||||||||| |||||||||| ||| ||||||||| || | || ||||
Sbjct 1050 TGCTTTTTCCTATAAATTTGGAAATATGAAGAAAGGACAGTCTCATGTGGCA-GCTTCTC 1108
Query 1148 CACTTTGTGACAAACATGTATTCAGCAAGGTTAAACAAGGACTCGGAGGCAATGTAAGGA 1207
|| |||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||
Sbjct 1109 CATTTTGTGACAAACTTGTATTCAACAAGGTTAAACAAGGACTTGGAGGCAATGTGAGGA 1168
Query 1208 TTATTCTATCTGGAGCTGCTCCTCTTGCTAGCCACGTAGAGTCATTTCTTAGAGTGGTGG 1267
||||||| |||||||| |||||||| ||||| ||| |||| || ||||| ||||| || |
Sbjct 1169 TTATTCTGTCTGGAGCGGCTCCTCTCGCTAGTCACATAGAATCTTTTCTAAGAGTTGTTG 1228
Query 1268 CATGCTGTCATGTTTTACAAGGATACGGTCTCACTGAAAGCTGTGCTGGAACTTTTGTC- 1326
|||| ||| ||||| |||||||||| ||||| ||||| || |||||||||||||||| |
Sbjct 1229 CATGTTGTAATGTTCTACAAGGATATGGTCTAACTGAGAGTTGTGCTGGAACTTTTG-CA 1287
Query 1327 TCGCTGCCAGACGAACTGGACATGCTCGGCACAGTTGGTCCACCAGTGCCAAACGTTGAT 1386
|| | ||||||||||| |||||||| || || ||||||||||| ||||||||||| |||
Sbjct 1288 ACGTTCCCAGACGAACTAGACATGCTTGGGACTGTTGGTCCACCCGTGCCAAACGTCGAT 1347
Query 1387 ATACGCCTTGAATCTGTCCCCGAGATGGAA-TATGATGCTCTTGCAAGTACTCCACGTGG 1445
|||||||||||||||||||| || || ||| ||||||||||||| ||||||||| || ||
Sbjct 1348 ATACGCCTTGAATCTGTCCCGGAAAT-GAATTATGATGCTCTTGGAAGTACTCCGCGAGG 1406
Query 1446 TGAAATCTGCATTCGGGGAAAGACCCTT-TTCTCTGGTTACTACAAACGTGAAGACCTCA 1504
||||| ||||| || ||||| | | || || || || ||||||||||||||||||||||
Sbjct 1407 CGAAATATGCATACGAGGAAA-AACTTTATTTTCAGGGTACTACAAACGTGAAGACCTCA 1465
Query 1505 CAAAAGAGGTTCTCATTGATGGATGGCTGCACACAGGTGATGTTGGTGAGTGGCAACCAA 1564
||||||||||| | || || |||||| |||||||||||||||||||||||||||||||||
Sbjct 1466 CAAAAGAGGTTTTTATCGACGGATGGTTGCACACAGGTGATGTTGGTGAGTGGCAACCAA 1525
Query 1565 ATGGAAGCATGAAGATAATTGACAGGAAGAAGAATATCTTTAAACT-GTCACAAGGAGAG 1623
||||||||||||||||||||||| |||| ||||| ||||| ||||| | | |||||||||
Sbjct 1526 ATGGAAGCATGAAGATAATTGACCGGAAAAAGAACATCTTCAAACTCG-CGCAAGGAGAG 1584
Query 1624 TATGTTGCGGTCGAGAACATAGAAAACATCTATGGTGAAGTACAAGCTGTTGATTCCG-T 1682
||||| || || ||||| ||||||| |||| || ||||| ||| | |||| || | |
Sbjct 1585 TATGTCGCTGTTGAGAATTTAGAAAATGTCTACAGTCAAGTAGAAGTTATTGAATC-GAT 1643
Query 1683 GTGGGTGTACGGGAACAGCTTTGAGTCCTTCCTAGTCGCTATCGCCAACCCAAACCAGCA 1742
||||| || || |||||||||||||||||||| ||||| ||||| ||||| ||| ||
Sbjct 1644 ATGGGTATATGGAAACAGCTTTGAGTCCTTCCTTGTCGCAATCGCTAACCCGGCCCAACA 1703
Query 1743 AA-TCCTTGAACGCTGGGCTGCAGAAAACGGTGTGAGCGGTGACTACAACGCTC-TCTGT 1800
|| || ||||||| ||||||| || || || |||| || |||| |||| | | ||||
Sbjct 1704 AACTC-TTGAACGATGGGCTGTGGAGAATGGAGTGAATGGAGACTTCAACTC-CATCTGC 1761
Query 1801 CAAAATGAAAAGGCAAAGG-ATTTCATACTTGGAGAACTTGTTAAAATGGCCAAAGAGAA 1859
||||| | ||||||||| | ||| ||||||||||||||| ||||||| |||||||||||
Sbjct 1762 CAAAACGCAAAGGCAAAAGCATT-CATACTTGGAGAACTCGTTAAAACAGCCAAAGAGAA 1820
Query 1860 AAAGATGAAGGGGTTTGAGATCATCAAGGC-GATTCATCTTGACCCAGTGCCGTTTGACA 1918
||| ||||||| ||||||||||| || | | ||||||| || |||||| |||| ||||
Sbjct 1821 CAAGTTGAAGGGTTTTGAGATCATAAAAGATG-TTCATCTGGAACCAGTGGCGTTCGACA 1879
Query 1919 TGGAACGCGATCTTCTTACGCCGACCTTCAAAAAGAAAAGGCCTCAGTTACTGAAATACT 1978
||||||| || |||||||| || |||| ||||||||| |||||||| || || |||||||
Sbjct 1880 TGGAACGAGACCTTCTTACTCCAACCTACAAAAAGAAGAGGCCTCAATTGCTCAAATACT 1939
Query 1979 ACCAGAGTGTGATCGATGAAATGTACAAGACCACAAATGAAAAAT-TAGCTTCC 2031
| |||| ||||||| |||||||||||||||| ||||| |||| | ||||||||
Sbjct 1940 ATCAGAATGTGATCCATGAAATGTACAAGACAACAAAGGAAAG-TCTAGCTTCC 1992
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109888993005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5