BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492512
Length=1689
Score E
Sequences producing significant alignments: (Bits) Value
AT4G23560.1 | Symbols: AtGH9B15, GH9B15 | glycosyl hydrolase 9B... 2464 0.0
AT4G09740.1 | Symbols: AtGH9B14, GH9B14 | glycosyl hydrolase 9B... 2001 0.0
> AT4G23560.1 | Symbols: AtGH9B15, GH9B15 | glycosyl hydrolase
9B15 | chr4:12293332-12295859 REVERSE LENGTH=1812
Length=1812
Score = 2464 bits (1334), Expect = 0.0
Identities = 1575/1692 (93%), Gaps = 13/1692 (1%)
Strand=Plus/Plus
Query 1 GCaaaatcaaaaaacactcgaaacccatttaaaaagagaaacatttcttgaaaaaGTTCT 60
|||||||||| |||| ||| |||||||||| |||||||||||| ||||| |||||||| |
Sbjct 1 GCAAAATCAAGAAACTCTCAAAACCCATTTCAAAAGAGAAACACTTCTTTAAAAAGTTTT 60
Query 61 AGCAATAAATAATGGGAAAGCTCTTGGTGTTAATGTTAGTTATGATGTTTTTGGCTTTCG 120
| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct 61 ATTAATAAATAATGGGAAAGCTCTTGGTGTTAATGTTAGTTGGGATGTTCTTGGCTTTTG 120
Query 121 AAAGCTTGGAAGCTCTTGATTACGGAGATGCACTAAACAAGTCAATCTTGTTCTTTGAAG 180
||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 121 AAAGCTTGGAAGCTCTTGAATATGGAGATGCACTTAACAAGTCAATCTTGTTCTTTGAAG 180
Query 181 GCCAAAGATCCGGTAAACTCCCGACTAACCAACGGGTTAAATGGCGAGCCGATTCTGCCC 240
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 181 GCCAACGATCCGGTAAACTCCCGACTAACCAACGAGTTAAATGGCGAGCCGATTCTGCCC 240
Query 241 TCTCTGATGGTTCACTAGCTAATGTGAATTTAATTGGAGGATATTACGATGCTGGTGACA 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TCTCTGATGGTTCACTTGCTAATGTGAATTTAATTGGAGGATATTACGATGCTGGTGACA 300
Query 301 ATGTAAAATTTGTGTGGCCAATGTCATTTACCACAACCTTGTTGAGTTGGGCAGCAATTG 360
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 301 ATGTAAAATTTGTGTGGCCAATGTCATTTACCACAACCTTGTTAAGTTGGGCTGCAATTG 360
Query 361 AATACCAAAATGAGATTTCTTCCGTTAACCAGCTCGGTTATCTCCGGTCTACTATCAAAT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 AATACCAAAATGAGATTTCTTCCGTTAACCAGCTCGGTTATCTCCGGTCTACTATCAAAT 420
Query 421 GGGGTACCGATTTTATCCTCCGCGCTCATGCTTCGCCCACCATGCTATATACACAGGTGG 480
|||| |||||||| ||||| ||||||||| | || |||| |||||||||||| |||||||
Sbjct 421 GGGGAACCGATTTCATCCTACGCGCTCATACATCTCCCAACATGCTATATACCCAGGTGG 480
Query 481 GAGATGGGAATTCAGATCATAGTTGTTGGGAGAGGCCAGAAGATATGGACACACCAAGAA 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 481 GAGATGGTAATTCAGATCATAGTTGTTGGGAGAGGCCAGAAGATATGGACACATCAAGAA 540
Query 541 CTCTCTACAGTATCTCTTCCTCTTCCCCCGGTTCCGAAGCCGCGGGTGAAGCAGCAGCCG 600
|||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct 541 CTCTCTACAGTATCTCTTCCTCTTCCCCTGGTTCTGAAGCCGCGGGTGAAGCCGCAGCCG 600
Query 601 CTCTTGCCGCAGCCTCACTTGTTTTCAAATCGGTCGATTCTACTTATTCATCCACGCT-T 659
||||||| || |||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 601 CTCTTGCAGCGGCCTCACTTGTTTTCAAATCGGTCGATTCTACTTATTCATCCACACTAT 660
Query 660 CTAAGCCATGCTAAATCCCTATTTGAATTTGCTGATAAGTATAGAGGTTCTTACCAAGCA 719
||| |||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 661 -TAAACCATGCAAAAACCCTATTTGAATTTGCTGATAAGTACAGAGGTTCTTATCAAGCA 719
Query 720 TCTTGCCCTTTCTACTGCTCATACTCTGGCTACCAGGATGAACTATTATGGGCTGCTACT 779
|||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||
Sbjct 720 TCTTGCCCTTTCTACTGCTCCTACTCCGGCTACCAGGATGAATTATTATGGGCTGCGGCT 779
Query 780 TGGTTATACAAAGCAACAGGAGAGAAGAGTTACATAAATTATGTTATAAGCAATAAAGAT 839
||| |||| |||||||||||||| || | |||||||||||||||||||||||||||||||
Sbjct 780 TGGCTATATAAAGCAACAGGAGATAAAATTTACATAAATTATGTTATAAGCAATAAAGAT 839
Query 840 TGGAGCCAAGCCGTGAATGAATTCAGCTGGGACAACAAATTCGCCGGTGCTCAGGCTTTG 899
|||||||||||||| ||||||||||| |||||||||||||||| ||| ||||| |||||
Sbjct 840 TGGAGCCAAGCCGTTAATGAATTCAGTTGGGACAACAAATTCGTCGGCGCTCAAGCTTTA 899
Query 900 CTCGCATCGGAGTTTTATAATGGGACAAATGACTTGGCAAAATTTAAGACCGATGTTGAA 959
|||| |||||||||||| || ||| ||||||||||||||||||||||| |||||||||||
Sbjct 900 CTCGTATCGGAGTTTTACAACGGGGCAAATGACTTGGCAAAATTTAAGTCCGATGTTGAA 959
Query 960 TCATTCGTCTGTGCATTGATGCCAGGAAGTAGCTCTCAACAAATTAAGCCAACTCCTGGT 1019
|| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 960 TCCTTCGTCTGTGCAATGATGCCAGGAAGTAGCTCTCAACAAATTAAACCAACTCCTGGT 1019
Query 1020 GGCCTTTTGTTTATTAGAGACAGTAGCAACTTACAATATGTAACAACGGCTACAACTGTT 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GGCCTTTTGTTTATTAGAGACAGTAGCAACTTACAATATGTAACAACGGCTACAACTGTT 1079
Query 1080 TTGTTCCATTACTCAAAAACTCTTACCAAAGCCCGGGTTGGTTCAATCCAGTGTGGTTCG 1139
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 1080 TTGTTCCATTACTCAAAAACTCTTACCAAAGCCGGGGTTGGTTCAATCCAGTGCGGTTCG 1139
Query 1140 ACCCAGTTCACCCTATCTCAAATTCGAAATTTCGCCAAATCACAGGTCGATTACATCCTT 1199
||| |||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct 1140 ACCAAGTTCACCGTATCTCAAATTCGAAATTTTGCCAAATCACAGGTTGATTATATCCTT 1199
Query 1200 GGAAATAATCCAATGAAAATGTCTTACATGGTTGGATTTGGAACCAAGT-TCCCAACACA 1258
|||||||||||||||||||||||||||||||| |||||||| || |||| ||| ||||||
Sbjct 1200 GGAAATAATCCAATGAAAATGTCTTACATGGTCGGATTTGGGACAAAGTATCC-AACACA 1258
Query 1259 ACCTCATCATAGAGGCTCATCTTTACCGTCGATCCAATCTAAACCGGAGAAAATCGACTG 1318
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1259 ACCTCATCATAGAGGCTCATCTTTACCATCGATCCAATCTAAACCGGAGAAAATTGACTG 1318
Query 1319 CAATGGAGGATATTCATACTACAATTCTGATACACCAAACCCGAATGTGCATACCGGCGC 1378
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1319 TAATGGAGGATATTCATACTACAATTCTGATACACCAAACCCGAATGTGCATATTGGTGC 1378
Query 1379 AATTGTGGGCGGACCGAATTCATCCGACCAGTATAGCGACAAAAAATCAGATTACTCTCA 1438
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1379 AATTGTGGGCGGACCGAATTCATCCGATCAGTATAGCGACAAAAAATCAGATTACTCTCA 1438
Query 1439 TGCAGAGCCCACAACTTACATCAACGCAGCCTTTATTGGGCCCGTCGCTGCTCTGATCAG 1498
||| ||||||||||||||||||||||| ||||||||||| || || || ||||| |||||
Sbjct 1439 TGCTGAGCCCACAACTTACATCAACGCCGCCTTTATTGGACCTGTTGCAGCTCTAATCAG 1498
Query 1499 TTCTTCCGGATAAACTCACGTTTATATTTGGTTGTGTGGAAACAAATATTAGCAAAGAAG 1558
|||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||
Sbjct 1499 TTCTTCCGGATAAACTCACGTTTAGATT-GGTTGTGGGGAAACAAATATTAGCAAAGAAG 1557
Query 1559 AATGATTACT-AGCTCAGCAGCAACTATTAAGACTACAAACTTGAATAATTAGTCGTTGG 1617
||| |||||| | ||| || |||||||| |||||||||||| ||||||||||| ||
Sbjct 1558 AATCATTACTCA--TCAACA--AACTATTATGACTACAAACTTAAATAATTAGTCA--GG 1611
Query 1618 AGGATGTATCACTTGCTTTAAACATATATCTTTATACAGATGTATATACCTACACTTATA 1677
||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||
Sbjct 1612 -GGATGTATCGTTTGCTTTAAACATATATCTCTATATAGATGTATATACCTACACACATA 1670
Query 1678 CACACATTCACA 1689
|||||| |||||
Sbjct 1671 CACACACTCACA 1682
> AT4G09740.1 | Symbols: AtGH9B14, GH9B14 | glycosyl hydrolase
9B14 | chr4:6142706-6145003 REVERSE LENGTH=1437
Length=1437
Score = 2001 bits (1083), Expect = 0.0
Identities = 1324/1441 (92%), Gaps = 14/1441 (1%)
Strand=Plus/Plus
Query 72 ATGGG-AAAGCTCTTGG-TGTTAATGTTAGTTATGATGTTTTTGGCTTTCGAAAGCTTGG 129
||||| ||| ||||||| || |||||||| || |||||| |||||||||||||||||||
Sbjct 1 ATGGGCAAA-CTCTTGGTTG-TAATGTTAATTGGGATGTTCTTGGCTTTCGAAAGCTTGG 58
Query 130 AAGCTCTTGATTACGGAGATGCACTAAACAAGTCAATCTTGTTCTTTGAAGGCCAAAGAT 189
|||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct 59 AAGCTCTTGACTATGGAGATGCACTGAACAAATCAATTTTGTTCTTTGAAGGCCAAAGAT 118
Query 190 CCGGTAAACTCCCGACTAACCAACGGGTTAAATGGCGAGCCGATTCTGCCCTCTCTGATG 249
| ||||||||||||||||| ||| |||||||||||||||| ||||||| ||| ||||| |
Sbjct 119 CTGGTAAACTCCCGACTAATCAAAGGGTTAAATGGCGAGCTGATTCTGGCCTGTCTGACG 178
Query 250 GTTCACT-AGCTAATGTGAATTTAATTGGAGGATATTACGATGCTGGTGACAATGTAAAA 308
|| || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 179 GTGCA-TCAGCTAATGTGAATTTGATTGGAGGATATTACGATGCTGGTGACAATGTAAAA 237
Query 309 TTTGTGTGGCCAATGTCATTTACCACAACCTTGTTGAGTTGGGCAGCAATTGAATACCAA 368
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 238 TTTGTGTGGCCAATGTCATTTACCACAACCTTGTTGAGTTGGGCTGCACTTGAATACCAG 297
Query 369 AATGAGATTTCTTCCGTTAACCAGCTCGGTTATCTCCGGTCTACTATCAAATGGGGTACC 428
||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 298 AATGAGATTACTTTCGTTAACCAGCTTGGTTATCTCCGGTCTACTATCAAATGGGGAACT 357
Query 429 GATTTTATCCTCCGCGCTCATGCTTCGCCCACCATGCTATATACACAGGTGGGAGATGGG 488
||||||||||||| |||||| | ||| ||| |||||||||||||||||| ||||||||
Sbjct 358 AATTTTATCCTCCGTGCTCATACGTCGACCAACATGCTATATACACAGGTAGGAGATGGA 417
Query 489 AATTCAGATCATAGTTGTTGGGAGAGGCCAGAAGATATGGACACACCAAGAACTCTCTAC 548
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 418 AATTCAGATCATAGTTGTTGGGAGAGACCAGAAGATATGGACACACCTAGAACTCTCTAT 477
Query 549 AGTATCTCTTCCTCTTCCCCCGGTTCCGAAGCCGCGGGTGAAGCAGCAGCCGCTCTTGCC 608
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 478 AGTATCTCTTCCTCTTCCCCCGGTTCCGAAGCCGCAGGTGAAGCCGCAGCCGCTCTTGCC 537
Query 609 GCAGCCTCACTTGTTTTCAAATC-GGTCGATTCTACTTATTCATCCACGCTT-CTAAGCC 666
|| |||||||||||||||||| | ||| |||||||| |||||||||| || |||| |
Sbjct 538 GCGGCCTCACTTGTTTTCAAA-CTGGTTGATTCTACATATTCATCCA-AATTACTAAACA 595
Query 667 ATGCTAAATCCCTATTTGAATTTGCTGATAAGTATAGAGGTTCTTACCAAGCATCTTGCC 726
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 596 ATGCTAAATCCCTATTTGAATTTGCTGATAAGTACAGAGGTTCTTACCAAGCTTCTTGCC 655
Query 727 CTTTCTACTGCTCATACTCTGGCTACCAGGATGAACTATTATGGGCTGCTACTTGGTTAT 786
| |||||||||||| |||| ||||||||||||||||| || |||||||| |||||||||
Sbjct 656 CCTTCTACTGCTCACACTCAGGCTACCAGGATGAACTTTTGTGGGCTGCGGCTTGGTTAT 715
Query 787 ACAAAGCAACAGGAGAGAAGAGTTACATAAATTATGTTATAAGCAATAAAGATTGGAGCC 846
||||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 716 ACAAAGCAACAGGGGAAAAGAGTTACTTAAATTATGTTATAAGCAACAAAGATTGGAGCA 775
Query 847 AAGCCGTGAATGAATTCAGCTGGGACAACAAATTCGCCGGTGCTCAGGCTTTGCTCGCAT 906
||||| | |||||||| || |||||||||||||||||||| | ||| ||||| |||||||
Sbjct 776 AAGCCATCAATGAATTTAGTTGGGACAACAAATTCGCCGGCGTTCAAGCTTTACTCGCAT 835
Query 907 CGGAGTTTTATAATGGGACAAATGACTTGGCAAAATTTAAGACCGATGTTGAATCATTCG 966
|||||||||| || ||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct 836 CGGAGTTTTACAACGGGGCAAATGACTTGGAAAAATTTAAGACCGATGTTGAATCATTCG 895
Query 967 TCTGTGCATTGATGCCAGGAAGTAGCTCTCAACAAATTAAGCCAACTCCTGGTGGCCTTT 1026
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 896 TCTGTGCATTGATGCCAGGAAGTAGCTCTCAACAAATTAAGCCAACTCCTGGTGGCATTT 955
Query 1027 TGTTTATTAGAGACAGTAGCAACTTACAATATGTAACAACGGCTACAACTGTTTTGTTCC 1086
|||||||||||||||||||||||||||| ||||||||||||||||||||| | || |||
Sbjct 956 TGTTTATTAGAGACAGTAGCAACTTACAGTATGTAACAACGGCTACAACTATATTATTCT 1015
Query 1087 ATTACTCAAAAACTCTTACCAAAGCCCGGGTTGGTTCAATCCAGTGTGGTTCGACCCAGT 1146
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||
Sbjct 1016 ATTACTCAAAAACTCTAACCAAAGCCGGGGTTGGTTCAATCCAGTGTGGGTCGACTCAGT 1075
Query 1147 TCACCCTATCTCAAATTCGAAATTTCGCCAAATCACAGGTCGATTACATCCTTGGAAATA 1206
||||| ||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||
Sbjct 1076 TCACCGTATCTCAAATTCGAAATTTTGCCAAGTCACAGGTTGATTACATTCTTGGAAATA 1135
Query 1207 ATCCAATGAAAATGTCTTACATGGTTGGATTTGGAACCAAGT-TCCCAACACAACCTCAT 1265
||||| ||||||||||||||||||||||||||||||| |||| ||| | |||||||||||
Sbjct 1136 ATCCATTGAAAATGTCTTACATGGTTGGATTTGGAACAAAGTATCCTA-CACAACCTCAT 1194
Query 1266 CATAGAGGCTCATCTTTACCGTCGATCCAATCTAAACCGGAGAAAATCGACTGCAATGGA 1325
||||||||||| || |||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct 1195 CATAGAGGCTCGTCATTACCGTCAATCCAATCTAAACCAGAGAAAATCGACTGTAATGGA 1254
Query 1326 GGATATTCATACTACAATTCTGATACACCAAACCCGAATGTGCATACCGGCGCAATTGTG 1385
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 GGATTTTCATACTACAATTTTGATACACCAAACCCGAATGTGCATACCGGCGCAATTGTG 1314
Query 1386 GGCGGACCGAATTCATCCGACCAGTATAGCGACAAAA-AATCAGATTACTCTCATGCAGA 1444
|||||||| |||||||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct 1315 GGCGGACCAAATTCATCCGACCAGTATAGCGACAAAAGAA-CAGATTATTCTCATGCAGA 1373
Query 1445 GCCCACAACTTACATCAACGCAGCCTTTATTGGGCCCGTCGCTGCTCTGATCAGTTCTTC 1504
|||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||
Sbjct 1374 GCCCACAACTTACATCAATGCCGCCTTTATTGGGTCAGTCGCTGCTCTGATCAGTTCTTC 1433
Query 1505 C 1505
|
Sbjct 1434 C 1434
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83483506335
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5