BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492527
Length=2899
Score E
Sequences producing significant alignments: (Bits) Value
AT4G23460.1 | Symbols: | Adaptin family protein | chr4:1224367... 4558 0.0
AT4G11380.2 | Symbols: | Adaptin family protein | chr4:6920489... 2961 0.0
> AT4G23460.1 | Symbols: | Adaptin family protein | chr4:12243671-12248950
REVERSE LENGTH=2962
Length=2962
Score = 4558 bits (2468), Expect = 0.0
Identities = 2683/2787 (96%), Gaps = 14/2787 (1%)
Strand=Plus/Plus
Query 1 GGAGGAGAAGAAGTGTGGAGGTTGAAGAAGGGAG-AAATGAGCGGTCATGATTCGAAATA 59
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 16 GGAGGAGAAGAAGTGTGGAGGTTGAAGAAGGGAGAAAATGAGCGGTCATGATTCTAAATA 75
Query 60 CTTTTCGACTACGAAGAAGGGAGAGATCCCTGAGCTTAAAGAAGAGCTGAATTCACAGTA 119
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 76 TTTTTCGACTACGAAGAAGGGAGAGATCCCTGAGCTCAAGGAAGAGCTGAATTCACAGTA 135
Query 120 TAAGGATAAGAGGAAAGATGCTGTTAAGAAGGTTATTGCGGCAATGACTGTTGGAAAGGA 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 CAAGGATAAGAGGAAAGATGCTGTTAAGAAGGTTATTGCGGCAATGACTGTTGGAAAGGA 195
Query 180 TGTTTCATCACTTTTCACTGATGTAGTCAATTGCATGCAAACGGAGAATCTGGAGTTGAA 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 196 TGTTTCATCACTTTTCACTGATGTAGTCAATTGCATGCAAACTGAGAATCTGGAGTTGAA 255
Query 240 GAAGCTTGTTTATTTGTATCTGATAAACTATGCCAAAAGCCAGCCAGATCTTGCTATCCT 299
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 256 GAAGCTTGTTTACTTGTATCTGATAAACTATGCAAAAAGCCAGCCAGATCTTGCTATCCT 315
Query 300 CGCAGTTAATACTTTTGTAAAGGATTCACAAGACCCAAATCCATTGATCCGGGCTTTGGC 359
||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 316 CGCTGTAAATACTTTTGTTAAGGATTCACAAGACCCAAATCCATTGATCCGGGCTTTGGC 375
Query 360 TGTGCGAACAATGGGCTGTATTCGTGTTGACAAGATCACAGAATATCTGTGTGATCCTCT 419
||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||||||
Sbjct 376 TGTGCGAACGATGGGCTGTATTCGTGTTGATAAGATTACAGAATATTTGTGTGATCCTCT 435
Query 420 TCAGAAATGCCTAAAGGATGATGACCCATATGTCCGCAAGACAGCAGCTATTTGTGTTGC 479
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 436 TCAGAAATGCCTAAAGGATGATGATCCATATGTCCGCAAGACAGCAGCTATTTGTGTTGC 495
Query 480 TAAATTGTTTGACATAAATGCTGAATTAGTTGAGGATAGGGGGTTCCTTGAAGCCTTAAA 539
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 496 TAAACTGTTTGACATAAATGCTGAATTAGTTGAGGATAGGGGGTTCCTGGAAGCCTTAAA 555
Query 540 GGATTTAATATCAGACAATAATCCAATGGTTGTTGCAAATGCTGTAGCAGCCCTTGCAGA 599
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 556 GGATTTAATATCAGACAATAATCCAATGGTTGTGGCAAATGCTGTAGCTGCCCTTGCAGA 615
Query 600 GATACAAGAGAATAGTACTAGTCCCATATTTGAAATCAATAGTACCACCCTCACAAAGCT 659
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 616 GATCCAAGAGAATAGTACTAGTCCCATATTTGAAATCAATAGTACCATCCTCACAAAGCT 675
Query 660 CCTTACAGCTTTGAATGAATGTACTGAATGGGGTCAAGTATTTATATTAGATGCTTTGTC 719
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 676 CCTTACAGCTTTGAATGAATGTACTGAATGGGGTCAAGTTTTTATATTAGATGCTTTGTC 735
Query 720 GAGGTATAAGGCAGCTGATCCTCGTGAAGCTGAGAATATTGTTGAGAGAGTCACTCCAAG 779
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 736 GAGGTATAAGGCATCTGATCCTCGTGAAGCTGAAAATATTGTTGAGAGAGTCACTCCAAG 795
Query 780 GTTGCAACATGCCAACTGTGCTGTTGTGCTTTCAGCTGTTAAGATGATCCTTCAGCAGAT 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 GTTGCAACATGCCAACTGTGCTGTTGTGCTTTCAGCTGTTAAGATGATCCTTCAGCAGAT 855
Query 840 GGAGCTTATTACTAGTACAGATGTGATTCGAAATCTTTGCAAGAAGATGGCTCCTCCCCT 899
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 856 GGAGCTTATTACTAGCACAGATGTGATTCGAAATCTTTGCAAGAAGATGGCTCCTCCCCT 915
Query 900 AGTTACATTGCTTTCTGCAGAACCTGAGATACAGTATGTTGCACTTCGTAACATTAACCT 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 916 AGTTACATTGCTTTCTGCAGAACCTGAGATACAGTATGTTGCACTTCGTAACATTAACCT 975
Query 960 TATTGTCCAAAAGAGACCAACTATTCTTGCCCATGAAATCAAGGTGTTCTTCTGCAAGTA 1019
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 976 TATTGTCCAAAAGAGACCCACTATTCTTGCCCATGAAATCAAGGTGTTCTTCTGCAAGTA 1035
Query 1020 TAATGATCCGATTTATGTCAAGATGGAGAAGTTAGAAATTATGATAAAACTTGCTTCTGA 1079
|||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1036 TAATGATCCGATATATGTTAAGATGGAGAAGTTAGAGATTATGATAAAACTTGCTTCTGA 1095
Query 1080 CAGAAACATAGACCAGGTTCTTCTGGAGTTCAAAGAATATGCCACGGAAGTAGATGTAGA 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1096 CAGAAACATAGACCAGGTTCTTCTGGAGTTCAAAGAATATGCCACGGAAGTAGATGTTGA 1155
Query 1140 TTTTGTTCGGAAGGCTGTTCGTGCAATAGGCCGATGTGCCATCAAACTAGAAAGAGCAGC 1199
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1156 TTTTGTTCGGAAGGCTGTTCGTGCTATAGGCCGATGTGCCATCAAACTAGAAAGAGCAGC 1215
Query 1200 TGAACGTTGCATCAGTGTTTTACTTGAGCTGATCAAGATCAAAGTAAACTATGTTGTTCA 1259
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1216 TGAACGGTGCATCAGTGTTTTACTTGAGCTGATCAAGATCAAAGTAAACTACGTTGTGCA 1275
Query 1260 GGAGGCCATTATAGTCATCAAAGATATCTTTAGAAGATATCCAAACACGTATGAGTCCAT 1319
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1276 GGAGGCCATTATAGTCATCAAAGATATCTTTAGAAGATATCCAAATACGTATGAGTCCAT 1335
Query 1320 AATTGCAACACTCTGTGAGAGTCTAGACACATTGGATGAACCAGAAGCTAAGGCATCTAT 1379
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1336 AATCGCAACACTCTGTGAGAGTCTAGACACATTGGATGAACCAGAAGCTAAGGCATCTAT 1395
Query 1380 GATTTGGATCATTGGTGAATATGCTGAAAGAATCGACAATGCGGATGAACTTCTTGAAAG 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 GATTTGGATCATTGGTGAATATGCTGAAAGAATCGACAATGCGGATGAACTTCTTGAAAG 1455
Query 1440 CTTCTTGGAGAATTTTCCTGAGGAACCAGCACAAGTCCAGCTGCAGCTTCTTACAGCTAC 1499
|||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1456 CTTCCTGGAGAATTTCCCTGAGGAACCAGCACAAGTCCAACTGCAGCTTCTTACAGCTAC 1515
Query 1500 AGTCAAACTATTTCTGAAGAAGCCAACTGAAGGCCCACAACAAATGATTCAGGTTGTCTT 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1516 AGTCAAACTATTTCTGAAGAAGCCAACTGAAGGCCCACAACAAATGATTCAGGTTGTCTT 1575
Query 1560 GAATAATGCTACTGTTGAGACAGATAATCCTGATCTCAGGGATCGTGCATACATCTACTG 1619
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1576 GAATAATGCTACTGTTGAAACAGATAATCCTGATCTCAGGGATCGTGCATACATCTACTG 1635
Query 1620 GCGTCTTCTATCTACTGATCCCGAGGCGGCCAAGGATGTTGTTTTAGCTGAAAAGCCTGT 1679
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1636 GCGTCTTCTATCGACTGATCCTGAGGCGGCCAAGGATGTTGTTTTAGCTGAAAAGCCTGT 1695
Query 1680 GATTACTGACGACTCAAACCAACTTGATCCGTCGCTCCTGGATGAGCTACTTGCAAATAT 1739
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 GATTACTGATGACTCAAACCAACTTGATCCGTCGCTCCTGGATGAGCTACTTGCAAATAT 1755
Query 1740 ATCCACCTTGTCCTCTGTGTATCACAAGCCGCCAGAGGCTTTTGTAACCCGCTTGAAAAC 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1756 ATCCACCTTGTCCTCTGTGTATCACAAGCCGCCAGAGGCTTTTGTAACCCGCTTGAAAAC 1815
Query 1800 CACAGTTCAGAAAACGGAAGATGAGGACTATGTAGAAGGGAGCGAAACAGGATA-CCCTG 1858
|||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| |
Sbjct 1816 CACAGTTCAGAAAACGGAGGATGAGGATTATGTAGAAGGGAGCGAAACAGGATATCCC-G 1874
Query 1859 AGACATCTGGTAATCCGGTTGATGGTGCAGCTTCCCC-TGCAGCTACCACAGGCTATGTC 1917
|| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1875 AGGCATCTGGTAATCCGGTTGATGGTGCAGCTTCCCCGT-CAGCTACCACAGGCTATGTC 1933
Query 1918 CCAAAG-TCAGCTGCTGCCCCAGCTCCTGTGCCCGATCTGCTTGGTGACCTAATGGGGTC 1976
||||| | ||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1934 ACAAAGCT-AGCTGCTGCCCCAGCTCCTGTACCCGATCTGCTAGGTGACCTAATGGGGTC 1992
Query 1977 AGATAATGCTGCAATCGTCCCTGTAGATGAACCCACAACTCCGTCAGGTCGCCCGCTTCC 2036
||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 1993 AGATAATGCTGCAATCGTCCCTGTAGATGAACCCACAACTCCGTCAGGTCGTCCACTGCC 2052
Query 2037 TGTTGTCCTGCCAGCATCAAAAGGTCAAGGTCTGCAGATTAGCGCTCAATTAACCCGACA 2096
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2053 TGTTGTCCTACCAGCATCAAAGGGTCAAGGTCTGCAGATTAGCGCTCAATTAACCCGACA 2112
Query 2097 AGATGGTCAAGTATTCTACACTATGCTCCTCGAAAACAACTCGCAGTCACTTCTTGATGG 2156
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 2113 AGATGGTCAAGTATTCTACAGTATGCTCCTCGAGAACAACTCGCAGTCACTTCTTGATGG 2172
Query 2157 CTTCATGATTCAGTTCAACAAAAACTCATTCGGCCTTGCAGCTGTCGGACCTCTCCAGGT 2216
||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct 2173 CTTCATGATTCAGTTCAACAAAAACTCATTCGGCCTTGCAGCTGTCGGATCACTTCAGGT 2232
Query 2217 TCCGCCTCTGCAACCCGGAGCATCTGCCAGGACAATGTTGCCAATGGTATTGTCCCAGAA 2276
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 2233 TCCGCCTCTGCAACCCGGAGCATCTGCCAGGACAATGATGCCAATGGTATTGTCCCAAAA 2292
Query 2277 CATGTCTGCTGGGC-CCACCAGCTCGGTATTGCAAGTTGCCGTAAAAAACAACCAGCAGC 2335
||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2293 CATGTCTACTGG-CTCCACCAGCTCGGTATTGCAAGTTGCCGTCAAAAACAACCAGCAGC 2351
Query 2336 CTGTCTGGTACTTCGAGGATAAGATTGTACTTCATGCTCTTTTCTCAGAAGATGGTAGGA 2395
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||
Sbjct 2352 CTGTCTGGTACTTCGAGGATAAGATTGTACTTAACGCTCTTTTCTCAGAAGATGGTCGGA 2411
Query 2396 TGGAACGCGGGACCTTCCTCGAGACATGGAGATCGTTACCGGATTCAAACGAAGTCCAGA 2455
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||| || ||||
Sbjct 2412 TGGAGCGCGGAACCTTCCTCGAGACATGGAAATCGTTACCGGATTCAAACGAGGTGCAGA 2471
Query 2456 AGGAATTCCCCGGGATAACCATCACGAGCGTGGAGTCAACACTTGATTTGCTTGCCGCAT 2515
| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 2472 AAGAATTCCCCGGGATAACCATCACGAGCGTGGAGTCAACACTTGATTTACTCGCCGCAT 2531
Query 2516 CAAACATGTTCTTCATAGCAAAGCGTAAAAACGGAAACCAAGACGTGCTGTATCTTTCAG 2575
|||||||||||||||||||||||||||| || || ||||||||||| || |||||||| |
Sbjct 2532 CAAACATGTTCTTCATAGCAAAGCGTAAGAATGGGAACCAAGACGTCCTCTATCTTTCGG 2591
Query 2576 CCAAGGTACCAAGAGGCATACCGTTCTTGATCGAACTAACGGCCATGGTGGGTCAACCTG 2635
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 2592 CCAAGGTACCAAGAGGCATACCGTTCCTGATCGAACTAACGGCCATAGTGGGTCAACCTG 2651
Query 2636 GTCTGAAATGTGCAGTCAAGACTCCAACTCCTGAGATCGCTCCTCTCTTCTTTGAAGCCG 2695
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 2652 GTCTGAAATGTGCAGTCAAGACTCCAACCCCTGAGATCGCTCCTCTCTTCTTTGAAGCAG 2711
Query 2696 TCGAAATTCTCTTCAAAGCTTGAGATTTTGATTTTACACTGTCAAAAAGGTAA-CAAATT 2754
|||||||||||||||| |||||| ||| |||||||||||| | || ||||| ||||||
Sbjct 2712 TCGAAATTCTCTTCAAGGCTTGA--TTT-GATTTTACACTGCCCTAA-GGTAAGCAAATT 2767
Query 2755 TTTTCTTTTAGTGTATGTAGTAAGTGA 2781
| |||||||||||||||||||||||||
Sbjct 2768 TCTTCTTTTAGTGTATGTAGTAAGTGA 2794
> AT4G11380.2 | Symbols: | Adaptin family protein | chr4:6920489-6925576
FORWARD LENGTH=3002
Length=3002
Score = 2961 bits (1603), Expect = 0.0
Identities = 2291/2624 (87%), Gaps = 44/2624 (2%)
Strand=Plus/Plus
Query 123 GGATAAGAGGAAAGATGCTGTTAAGAAGGTTATTGCGGCAATGACTGTTGGAAAGGATGT 182
||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 272 GGATAAGAGAAAAGATGCAGTTAAGAAGGTTATTGCGGCGATGACTGTTGGAAAGGATGT 331
Query 183 TTCATCACTTTTCACTGATGTAGTCAATTGCATGCAAACGGAGAATCTGGAGTTGAAGAA 242
|||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||
Sbjct 332 TTCATCACTTTTCACTGATGTAGTCAATTGTATGCAAACGGAAAATTTGGAGTTGAAGAA 391
Query 243 GCTTGTTTATTTGTATCTGATAAACTATGCCAAAAGCCAGCCAGATCTTGCTATCCTCGC 302
||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||| || ||
Sbjct 392 GCTTGTTTACTTGTATCTCATAAATTATGCGAAAAGCCAGCCAGATCTTGCTATTCTTGC 451
Query 303 AGTTAATACTTTTGTAAAGGATTCACAAGACCCAAATCCATTGATCCGGGCTTTGGCTGT 362
||| ||||| ||||||||||||||||| || |||||||| |||| || |||||||||||
Sbjct 452 AGTAAATACCTTTGTAAAGGATTCACAGGATCCAAATCCGCTGATTCGTGCTTTGGCTGT 511
Query 363 GCGAACAATGGGCTGTATTCGTGTTGACAAGATCACAGAATATCTGTGTGATCCTCTTCA 422
||| ||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||
Sbjct 512 GCGGACAATGGGCTGCATTCGTGTTGATAAAATCACAGAATATCTATGTGATCCTCTTCA 571
Query 423 GAAA-TGCCTAAAGGATGATGACCCATATGTCCGCAAGACAGCAGCTATTTGTGTTGCTA 481
||| ||||||||||||||||||||||||||| | ||||| || |||||||| || ||||
Sbjct 572 -AAAGTGCCTAAAGGATGATGACCCATATGTCAGGAAGACTGCGGCTATTTGCGTCGCTA 630
Query 482 AATTGTTT-GACATAAATGCTGAATTAGTTGAGGATAGGGGGTTCCTTGAAGCCTTAAAG 540
| | ||| |||||||||||||||||||||||||| || || |||||||||||||| |||
Sbjct 631 AGCT-TTTCGACATAAATGCTGAATTAGTTGAGGACAGAGGTTTCCTTGAAGCCTTGAAG 689
Query 541 GATTTAATATCAGACAATAATCCAATGGTTGTTGCAAATGCTGTAGCAGCCCTTGCAGAG 600
||||| |||||||| || ||||||||||||||||| |||||||||||||||||||| |||
Sbjct 690 GATTTGATATCAGATAACAATCCAATGGTTGTTGCCAATGCTGTAGCAGCCCTTGCGGAG 749
Query 601 ATACAAGAGAATAGTACTAGTCCCATATTTGAAATCAATAGTACCACCCTCACAAAGCTC 660
|| |||||||| |||| ||| ||||| ||||| |||||||||||||| || |||||||||
Sbjct 750 ATTCAAGAGAACAGTAGTAGCCCCATCTTTGAGATCAATAGTACCACTCTTACAAAGCTC 809
Query 661 CTTACAGCTTTGAATGAATGTACTGAATGGGGTCAAGTATTTATATTAGATGCTTTGTCG 720
||||| ||| | |||||||| ||||| ||||||||||| |||||| |||||||||| |||
Sbjct 810 CTTACTGCTCTAAATGAATGCACTGAGTGGGGTCAAGTTTTTATACTAGATGCTTTATCG 869
Query 721 AGGTATAAGGCAGCTGATCCTCGTGAAGCTGAGAATATTGTTGAGAGAGTCACTCCAAGG 780
| |||||| ||||||||||| ||||| ||||| ||||||||||||||||| || ||||||
Sbjct 870 AAGTATAAAGCAGCTGATCCCCGTGAGGCTGAAAATATTGTTGAGAGAGTAACACCAAGG 929
Query 781 TTGCAACATGCCAACTGTGCTGTTGTGCTTTCAGCTGTTAAGATGATCCTTCAGCAGATG 840
||||||||||||||||| |||||||| |||||||||||||||||||||||||| || |||
Sbjct 930 TTGCAACATGCCAACTGCGCTGTTGTTCTTTCAGCTGTTAAGATGATCCTTCAACAAATG 989
Query 841 GAGCTTATTACTAGTACAGATGTGATTCGAAATCTTTGCAAGAAGATGGCTCCTCCCCTA 900
|| ||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||
Sbjct 990 GAACTTATTACTAGTACAGACGTGATTAGAAATCTTTGTAAGAAGATGGCTCCACCCCTT 1049
Query 901 GTTACATTGCTTTCTGCAGAACCTGAGATACAGTATGTTGCACTTCGTAACATTAACCTT 960
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1050 GTTACATTGCTTTCTGCCGAACCTGAGATACAATATGTTGCACTTCGTAACATTAATCTT 1109
Query 961 ATTGTCCAAAAGA-GACCAACTATTCTTGCCCATGAAATCAAGGTGTTCTTCTGCAAGTA 1019
||||| ||||| | |||| ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct 1110 ATTGTGCAAAA-ACGACCCACTATCCTTGCCCATGAAATTAAGGTTTTCTTCTGCAAGTA 1168
Query 1020 TAATGATCCGATTTATGTCAAGATGGAGAAGTTAGAAATTATGATAAAACTTGCTTCTGA 1079
||| || || |||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct 1169 TAACGACCCAATTTATGTTAAGATGGAGAAGTTGGAGATTATGATTAAACTTGCCTCTGA 1228
Query 1080 CAGAAACATAGACCAGGTTCTTCTGGAGTTCAAAGAATATGCCACGGAAGTAGATGTAGA 1139
||||||||||||||||||||||||||| |||||||| |||||||| |||||||| || ||
Sbjct 1229 CAGAAACATAGACCAGGTTCTTCTGGAATTCAAAGAGTATGCCACAGAAGTAGACGTTGA 1288
Query 1140 TTTTGTTCGGAAGGCTGTTCGTGCAATAGGCCGATGTGCCATCAAACTAGAAAGAGCAGC 1199
||||||| | |||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 1289 TTTTGTTAGAAAGGCTGTTCGTGCGATAGGCCGATGTGCTATCAAACTAGAGAGAGCAGC 1348
Query 1200 TGAACGTTGCATCAGTGTTTTACTTGAGCTGATCAAGATCAAAGTAAACTATGTTGTTCA 1259
|||||| |||||||||||||| || ||| |||||||||| ||||| || |||||||| ||
Sbjct 1349 TGAACGGTGCATCAGTGTTTTGCTCGAGTTGATCAAGATTAAAGTGAATTATGTTGTCCA 1408
Query 1260 GGAGGCCATTATAGTCATCAAAGATATCTTTAGAAGATATCCAAACACGTATGAGTCCAT 1319
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1409 GGAGGCCATTATTGTCATCAAAGATATCTTCAGAAGATATCCAAACACGTATGAGTCCAT 1468
Query 1320 AATTGCAACACTCTGTGAGAGTCTAGACACATTGGATGAACCAGAAGCTAAGGCATCTAT 1379
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1469 AATTGCAACACTCTGTGAGAGTTTAGACACTTTGGATGAACCAGAAGCTAAGGCATCTAT 1528
Query 1380 GATTTGGATCATTGGTGAATATGCTGAAAGAATCGACAATGCGGATGAACTTCTTGAAAG 1439
||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct 1529 GATATGGATCATTGGTGAATATGCTGAAAGAATTGACAATGCCGATGAGCTTCTTGAAAG 1588
Query 1440 CTT-CTTGGAGAATTTTCCTGAGGAACCAGCACAAGTCCAGCTGCAGCTTCTTACAGCTA 1498
||| || ||||||||||||||||||||||||||| |||||| ||||||| || || ||||
Sbjct 1589 CTTTCT-GGAGAATTTTCCTGAGGAACCAGCACAGGTCCAGTTGCAGCTCCTAACTGCTA 1647
Query 1499 CAGTCAAACTATTTCTGAAGAAGCCAACTGAAGGCCCACAACAAATGATTCAGGTTGTCT 1558
| || || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1648 CTGTTAAGCTATTCCTGAAGAAGCCAACTGAAGGCCCTCAACAAATGATTCAGGTTGTCT 1707
Query 1559 TGAATAATGCTACTGTTGAGACAGATAATCCTGATCTCAGGGATCGTGCATACATCTACT 1618
|||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct 1708 TGAATAATGCTACTGTGGAGACGGATAATCCTGATCTCAGAGATCGTGCATACATATACT 1767
Query 1619 GGCGTCTTCTATCTACTGATCCCGAGGCGGCCAAGGATGTTGTTTTAGCTGAAAAGCCTG 1678
||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||| |
Sbjct 1768 GGCGTCTTCTATCCACTGATCCTGAGGCTGCCAAGGATGTTGTCTTAGCTGAAAAGCCCG 1827
Query 1679 TGATTACTGACGACTCAAACCAACTTGATCCGTCGCTCCTGGATGAGCTACTTGCAAATA 1738
||||| |||||||||||||||| || || || || || || |||||||| ||| ||||||
Sbjct 1828 TGATTTCTGACGACTCAAACCAGCTAGACCCATCACTTCTTGATGAGCTTCTTACAAATA 1887
Query 1739 TATCCACCTTGTCCTCTGTGTATCACAAGCCGCCAGAGGCTTTTGTAACCCGCTTGAAAA 1798
| || ||||||||||||||||| ||||| || |||||||||||||| |||||||||||||
Sbjct 1888 TTTCGACCTTGTCCTCTGTGTACCACAAACCCCCAGAGGCTTTTGTTACCCGCTTGAAAA 1947
Query 1799 CCACAGTTCAGAAAACGGAAGATGAGGACTATGTAGAAGGGAGCGAAACAGGATACCCTG 1858
| |||||||||||||| ||||| ||||||| || ||||| |||||| |||||||| |
Sbjct 1948 CGACAGTTCAGAAAACAGAAGACGAGGACTTTGCGGAAGGAAGCGAAGCAGGATAC--T- 2004
Query 1859 AGACATCTGGTAATCCGGTTGATGGTGCAGCTTCCCCTGCAGCTA----CC-ACAGGCTA 1913
||||| |||||||||||||| |||||||||| ||| ||| || || |||| ||
Sbjct 2005 ---CATCTAGTAATCCGGTTGATAGTGCAGCTTCTCCTCCAGGTAATATCCCACAGCCT- 2060
Query 1914 T--GTCC--CAA--AGTCAGCTGCTGCCCCAGCTCCTGTGCCCGATCTGCTTGGTGACCT 1967
| | ||| || || | || | |||||||||||| || |||||||| ||||||||
Sbjct 2061 TCCGGAAGACAACCAG-CACCAGCGGTCCCAGCTCCTGTACCTGATCTGCTAGGTGACCT 2119
Query 1968 AATGGGGTCAGATAATGCTGCAATCGTCCCTGTAGATGAACCCACAACTCCGTCAGGTCG 2027
||||| | |||||||| || || ||||| || ||||| |||| ||||| || ||||
Sbjct 2120 GATGGGATTGGATAATGCCGCTATTGTCCCGGTTGATGATCCCATAACTCAATCTGGTC- 2178
Query 2028 C-CCGCTTCCTGTTGTCCTGCCAGCATCAAAAGGTCAAGGTCTGCAGATTAGCGCTCAAT 2086
| || || || |||||| | ||||| |||| ||||||||||||||||| ||||||||||
Sbjct 2179 CTCCTCTGCCCGTTGTCGTCCCAGCTTCAAGTGGTCAAGGTCTGCAGATAAGCGCTCAAT 2238
Query 2087 TAACCCGACAAGATGGTCAAGTATTCTACACTATGCTCCTCGAAAACAACTCGCAGTCAC 2146
|| ||||| ||||||| |||||||| |||| ||||||| |||| ||||||||||||||
Sbjct 2239 TATCCCGAAAAGATGGACAAGTATTTTACAGTATGCTCTTCGAGAACAACTCGCAGTCGG 2298
Query 2147 TTCTTGATGGCTTCATGATTCAGTTCAACAAAAACTCATTCGGCCTTGCAGCTG-TCGGA 2205
|||||||||| |||||||||||||||||||||||| |||||||||||||||||| | |||
Sbjct 2299 TTCTTGATGGTTTCATGATTCAGTTCAACAAAAACACATTCGGCCTTGCAGCTGCT-GGA 2357
Query 2206 CCTCTCCAGGTTCCGCCTCTGCAACCCGGAGCATCTGCCAGGACAATGTTGCCAATGGTA 2265
|||| ||| |||||||| |||| |||| | |||| |||||||||||| | || |||||
Sbjct 2358 TCTCTTCAGATTCCGCCTTTGCATCCCGCAACATCCGCCAGGACAATGCTACCTATGGTC 2417
Query 2266 TTGTCCCAGAACATGTCTGCTGGGCCCACCA-GCTCGGTATTGCAAGTTGCCGTAAAAAA 2324
|||| ||| ||||||||||||||||| ||| ||||| | || ||||| || || |||||
Sbjct 2418 TTGTTCCAAAACATGTCTGCTGGGCCT-CCAAGCTCGCTCTTACAAGTCGCTGTCAAAAA 2476
Query 2325 CAACCAGCAGCCTGTCTGGTACTTCGAG-GATAAGATTGTACTTCATGCTCTTTTCTCAG 2383
|||||||||||| || ||||||||| | ||||||||| ||||||||||||||||| |
Sbjct 2477 CAACCAGCAGCCCGTGTGGTACTTC-ACCGATAAGATTATACTTCATGCTCTTTTCGGTG 2535
Query 2384 AAGATGGTAGGATGGAACGCGGGACCTTCCTCGAGACATGGAGATCGTTACCGGATTCAA 2443
|||| ||||| |||||||| || |||||||| ||||||||||| ||||||||||| ||||
Sbjct 2536 AAGACGGTAGAATGGAACGTGGAACCTTCCTTGAGACATGGAGGTCGTTACCGGACTCAA 2595
Query 2444 ACGAAGTCCAGAAGGAATTCCCCGGGATAACCATCACGAGCGTGGAGTCAAC-ACTTGAT 2502
| ||||||| ||| |||||||||||||| |||||||||||||| || ||||| | | ||
Sbjct 2596 ATGAAGTCCTGAAAGAATTCCCCGGGATCACCATCACGAGCGTCGAATCAACTA-TCGAA 2654
Query 2503 TTGCTTGCCGCAT-CAAACATGTTCTTCATAGCAAAGCGTAAAAACGGAAACCAAGACGT 2561
||||| | |||| ||| ||||||||| ||||||||||| || ||||| |||||||||||
Sbjct 2655 TTGCTCACAGCATTCAA-CATGTTCTTTATAGCAAAGCGCAAGAACGGGAACCAAGACGT 2713
Query 2562 GCTGTATCTT-TCAGCCAAGG-TACCAAGAGGCATACCGTTCTTGATCGAACTAACGGCC 2619
| | || ||| |||||||| | | ||| ||| ||||||| |||||||| || || ||
Sbjct 2714 GATCTA-CTTATCAGCCAAAGAT-CCACGAGATGTACCGTTTTTGATCGAGCTCACTGCA 2771
Query 2620 ATGGTGGGTCAACCTGGTCTGAAATGTGCAGTCAAGACTCCAACTCCTGAGATCGCTCCT 2679
|||||||| ||||| ||||| ||||| ||||| || ||||| ||||| ||||| || |||
Sbjct 2772 ATGGTGGGCCAACCAGGTCTCAAATGCGCAGTGAAAACTCCCACTCCCGAGATTGCGCCT 2831
Query 2680 CTCTTCTTTGAAGCCGTCGAAATTCTCTTCAAAGCTTGA-GATT 2722
|||||||| ||||| | || |||||||||| |||||| ||||
Sbjct 2832 CTCTTCTTCGAAGCTTTGGAGCTTCTCTTCAAGGCTTGATGATT 2875
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144079460296
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5