BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492529 Length=3058 Score E Sequences producing significant alignments: (Bits) Value AT4G23440.1 | Symbols: | Disease resistance protein (TIR-NBS c... 4922 0.0 > AT4G23440.1 | Symbols: | Disease resistance protein (TIR-NBS class) | chr4:12237765-12240826 FORWARD LENGTH=3062 Length=3062 Score = 4922 bits (2665), Expect = 0.0 Identities = 2930/3061 (96%), Gaps = 5/3061 (0%) Strand=Plus/Plus Query 1 ATGGATTCTCGAGGTGATAGTTCTAGGTTCGGGCAATATCCGACAAAGCCTACTAGGAAC 60 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 1 ATGGATTCTCGAGGTGACAGTTCTAGGTTCGGGCAATATCCGACAAAGCCTACAAGGAAC 60 Query 61 ATGTCTTCATCTTCATCAGCTGCTTTCTTCTCAGCTAATCAGTCTCCGTTTTTCTCACCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATGTCTTCATCTTCATCAGCTGCTTTCTTCTCAGCTAATCAGTCTCCGTTTTTCTCACCA 120 Query 121 AGATCTCCTAAAATCCAACAAGAACTATCTGAATCTACTAGGTCTGATGCTCAATGTGAT 180 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 121 AGATCTCCTAAAATCCAACAAGAACTATCTGAATCTACTCGCTCTGATGCTCAATGTGAT 180 Query 181 AGCTTTGATCCTCTTAGCTCCAGCTCTGGTTTTCAAGAACCTGAGCTTGCGTTTTTAACC 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 181 AGCTTTGATCCTCTTAGCTCCAGCTCTGGTTTTCAAGAGCCTGAGCTTGCGTTTTTAACC 240 Query 241 GCACCTAATCAATGTCAGAGCCTCGAGGCTGCTGATCGAATCGCTTCGAGTAGTGTGATC 300 || |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 241 GCTCCTAATCAATGTCAGAGCCTTGAGGCTGCTGATCGAATCGCTTCGAGTAGTATGATC 300 Query 301 TCTTGTACTCCTTCTAGATATGGAAGAGGTCATGAGTCTTCTTCGTATACTCAGACATCT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TCTTGTACTCCTTCTAGATATGGAAGAGGTCATGAGTCTTCTTCGTATACTCAGACATCT 360 Query 361 TCTGTCTCTGTTTCTTACAATAGGTTAAGATGTTGTGATGTGTTTATAGGATTGTATGGT 420 ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 361 TCTGTATCTGTTTCTTATAATAGGTTGAGATGTTGTGATGTGTTTATAGGATTGTATGGT 420 Query 421 CAGAAGCCTTCTTTGCTTCGGTTTGCGGATTGGCTTAGAGCTGAGTTAGAGTTTCAAGGG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CAGAAGCCTTCTTTGCTTCGGTTTGCGGATTGGCTTAGAGCTGAGTTAGAGTTTCAAGGG 480 Query 481 ATGAGTTGTTTCATGTCGGATAGAGGGAGATGTAGGAGTTCAAGGAAACAAAGAATAGTT 540 ||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct 481 ATGAGTTGTTTTATGTCGGATAGAGGAAGATGTAGGAGTTCACGGAAACAGAGAATAGTT 540 Query 541 GAGAGAGCGATGGATGGTGCATCGTTCGGGGTTATTATTCTAACGAGAAAGGCGTTTAAG 600 |||||||||||||||||||| ||||| || ||||| || ||||||||||||||||||||| Sbjct 541 GAGAGAGCGATGGATGGTGCGTCGTTTGGAGTTATAATACTAACGAGAAAGGCGTTTAAG 600 Query 601 AATCCTTACACGATTGAGGAGCTACGGTTTTTCGCAAACAAGAAGAATCTTGTTCCGGTT 660 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AATCCTTATACGATTGAGGAGCTACGGTTTTTCGCAAACAAGAAGAATCTTGTTCCGGTT 660 Query 661 TTCTTTGATCTTTCTCCTGGAGACTGTCTTGTGAGAGATATAGTTGAGAAGAGAGGAGAT 720 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 661 TTCTTTGATCTTTCTCCTGGAGAGTGTCTTGTGAGAGATATAGTTGAGAAGAGAGGAGAT 720 Query 721 TTGTGGGAGAAACATGGAGGGGAATTGTGGGTTTTGTATGGAGGGATTGAGAAAGAGTGG 780 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 721 TTGTGGGAGAAACATGGAGGGGAATTGTGGGTTTTGTATGGTGGGATTGAGAAAGAATGG 780 Query 781 AAAGAGGCGGTTCACGGGTTATCGCGGGTTGATGATTGGAAGCTTGAAGCTCATGAAGGT 840 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 781 AAAGAGGCGGTTCACGGGCTATCGCGGGTTGATGATTGGAAGCTTGAAGCTCATGAAGGT 840 Query 841 AACTGGAGAGATTGTGTTTTCAGGGCAGTTACTTTGTTGGCAATGCGGTTAGGGAGGAGA 900 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 841 AACTGGAGAGATTGTGTTTTCAGGGCGGTTACTTTATTGGCAATGCGGTTAGGGAGGAGA 900 Query 901 AGTATAGTGGAGCGGTTAACGAAATGGCGGGATAAAGCGGAGAAAGAGGAATTTCCGTAT 960 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 901 AGTATAGTGGAACGGTTAACGAAATGGCGGGATAAAGCGGAGAAAGAGGAGTTTCCGTAT 960 Query 961 CCGCGGAACGAGAATTTTGTTGGGAGAAAGAAGGAATTATCTGAGCTAGAGTTTGTTTTA 1020 |||||||| |||| |||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 961 CCGCGGAATGAGAGTTTTGTTGGGAGGAAGAAGGAGTTATCTGAGCTAGAGTTTGTTTTA 1020 Query 1021 TTTGGAGATGTTGCTGGAGATTCGGAAAGGGATTACTTTGAGCTAAAGGCAAGGCCGACA 1080 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct 1021 TTTGGAGATGTTGCTGGAGATTCTGAAAGGGATTACTTTGAGTTAAAGGCAAGGCCGACA 1080 Query 1081 AGAAGGAAGAAGAACATTACGCTCGGGTGGAATAAAAGCGGTTCAGCAGAAGAAAGACGG 1140 ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| Sbjct 1081 AGAAGGAAGAAGAACGTGACGCTCGGGTGGAATAAAAGCGGTTCAGCGGAAGAAAGACGG 1140 Query 1141 AAGAAAGGCAAAGAGAAAGTTGTGTGGAAGGAGTCGGAGAAAGAGATCGAGATGCAAAGT 1200 |||||||| || || |||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 1141 AAGAAAGGGAAGGAAAAAGTTGTGTGGAAGGAGTCAGAGAAAGAGATTGAGATGCAAAGT 1200 Query 1201 ACAGAGTTGCCCTCCCGGAGTCAAGTGAAAGTAGGGAGAAACACGAGGAGAAAACGGTCG 1260 |||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1201 ACAGAGATGCCTTCACGGAGTCAAGTGAAAGTAGGGCGAAACACGAGGAGAAAACGGTCG 1260 Query 1261 ATGAAGATTGTTTACGGGAAAGGCGTGGCTTGCATCTCGGGTGAATCAGGGATTGGAAAA 1320 |||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||| Sbjct 1261 ATGAAGGTTGTTTACGGGAAAGGCGTGGCTTGCGTGTCAGGTGAATCAGGGATTGGAAAA 1320 Query 1321 ACTGAGCTGCTTCTTGAATTTGCTTGCCGGCATCACCAGAGGTATAAGATGGTTCTTTGG 1380 ||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| Sbjct 1321 ACTGAGCTGCTTCTTGAATTTGCTTACAGGCATCACCAAAGGTATAAGATGGTTCTTTGG 1380 Query 1381 ATAGGCGGCGAGAGCCGTTACATGAGACAAAACTATCTGAATCTTTATCAGTATTTGGAA 1440 ||||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 1381 ATAGGTGGTGAGAGCCGTTACATAAGACAGAACTATCTGAATCTTTATCAGTATTTGGAA 1440 Query 1441 GTCGACATTGGGATAGAGAATTCTTCTGATAAAACGCGGATGAAGAGCTTCGAAGAGCAA 1500 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1441 GTCGACATCGGGATAGAGAATTCTTCGGATAAAACGCGGATGAAGAGCTTCGAAGAGCAA 1500 Query 1501 GAAGACGCTGCGGTTTCAAAAATTAGAAAAGAGCTGATGAGGAATATACCGTTCTTGGTT 1560 ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 1501 GAAGATGCTGCGGTTTCCAAGATTAGAAAAGAGCTGATGAGGAATATACCGTTCTTGGTT 1560 Query 1561 GTCATCGATAACTTGGAGAGTGAAAAAGACTGGTGGGATTCGAAGCTCGTGATGGATCTT 1620 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1561 GTCATTGATAACTTGGAGAGTGAAAAAGACTGGTGGGATTCGAAGCTTGTGATGGATCTT 1620 Query 1621 CTTCCTAGGTTTGGAGGCGGGACTCACATTTTGATATCTACGCGTCTCTCCCAAGTTATG 1680 |||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct 1621 CTTCCTCGGTTTGGAGGCGGGACTCATATTTTGATATCTACACGTCTCTCTCAAGTTATG 1680 Query 1681 AACATGGAGCCATTGAAACTCTCCTACCTTTCTGGGGCTGAAGCTATGTCATTGATGCAG 1740 ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||| Sbjct 1681 AACATGGAGCCGTTGAAACTCTCTTACCTCTCTGGTGCTGAAGCTATGTCGTTGATGCAG 1740 Query 1741 GGGAATGTGAAAGATTATCCGGTTTCGGAAATGGATGCATTGAGAACGATTGAAGATAAA 1800 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1741 GGGAATGTTAAAGATTATCCGGTTTCGGAAATGGATGCATTGAGAACTATTGAAGATAAA 1800 Query 1801 CTTGGGCGGTTAACGTTGGGATTAGCAGTTGTAGGAGCAATATTGTCAGAGCTTCCTATA 1860 || || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1801 CTCGGACGGTTAACGTTGGGATTAGCAGTCGTAGGAGCAATATTGTCAGAGCTTCCTATA 1860 Query 1861 AACCCGAGCCGGCTTTTGGATACAATAAACAGAATGCCGTTAAGAGAGATGATAAGTAGT 1920 ||||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||| Sbjct 1861 AACCCGAGCCGGCTTTTGGATACTATAAATAGAATGCCGTTAAGAGAGATGGTGTGTAGT 1920 Query 1921 GGTCGGGACGGGAATCTGTTGAGAAAAAACGCGTTTCTGTTGCAGCTGTTTGAAGTTTGT 1980 ||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 1921 GGTCGAGAGGGGAATCTGTTGAGAAGAAATGCGTTTCTGTTGCAGCTGTTTGAAGTTTGT 1980 Query 1981 TTTTCGATCTTTGATCACGCGGATGGACCGAGAAGTTTGGCTACGAGAATGGTTGTTGCG 2040 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1981 TTTTCGATCTTTGATCACGCGGATGGACCTAGAAGTTTGGCTACGAGAATGGTTGTTGCT 2040 Query 2041 AGTGGGTGGTTAGCTCCGGCACCAGTTCCAGCTTCTCTATTAGCTTTGGCTGCTCATAAA 2100 ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct 2041 AGTGGGTGGTTAGCTCCTGCACCAGTTCCAGCTTCTTTATTAGCTTTGGCTGCTCATAAA 2100 Query 2101 CTCCCTGAGAAACACAGAGGTCCGAAGCGGCTATGGAGAAGACTAAGACGAGCTATAACC 2160 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 2101 CTCCCTGAGAAACACAGAGGTCCGAAGCGGCTATGGAGAAGACTAAGGCGCGCTATAACC 2160 Query 2161 TGCGGTTTTACGTCTTCAAACTCCAAACGATCAGGAGCTGAAGCTGCTTCAATGCTACTT 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2161 TGCGGTTTTACGTCTTCAAACTCCAAACGATCAGGAGCTGAAGCTGCTTCAATGCTACTT 2220 Query 2221 AGATTCAACATTGCTCGAACCAGCAGCATCAAGCTAGGGTTTATACAAATCCACGAGCTC 2280 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2221 AGATTCAACATTGCTCGAACCAGCAGCATCAAGCTAGGGTTTATACAGATCCACGAGCTT 2280 Query 2281 GTGAAACTCTATGCGAGAAACCGAGTACTGGTCAACGACAACGCGCCCGCAATGGTTCAG 2340 |||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||||| Sbjct 2281 GTGAAACTCTATGCGAGAAATCGAGTACTGGTCAATGAAAACGCTCCCGCAATGGTTCAG 2340 Query 2341 GCGGTGATAAGCCGCGGCTCGACCGTTGAAACCGCAGAGCAGATCTGGGCAGTTTGTTTC 2400 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 2341 GCGGTGATAAGCCGCGGCTCGACTGTTGAAACCGCAGAGCAGATCTGGGCGGTTTGTTTC 2400 Query 2401 TTGCTATTTGGTTTCAGCAACGAATCTCCGACTATTCAGCTAAAGATAACAGAGCTGCTG 2460 ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2401 TTGCTGTTTGGTTTTAGCAACGAATCTCCGACTATTCAGCTGAAGATAACAGAGCTGCTG 2460 Query 2461 ATTCTTGTGAAACAAGTAATCTTGCCTCTTGCAATCAGAACGTTCATATCATTTTCGCGA 2520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2461 ATTCTTGTGAAACAAGTAATCTTGCCTCTTGCAATCAGAACGTTCATATCATTTTCGCGA 2520 Query 2521 TGCACCGCCGCAGTGGAGCTATTAAGGGTCTGCACAAACGCTCTTGAAGCAGCTGATCAA 2580 ||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||| Sbjct 2521 TGCACAGCCTCAGTGGAGCTACTAAGGGTCTGCACAAACGCACTTGAAGCAGCTGACCAA 2580 Query 2581 ACGCTAGTGACACCAGTAGAGAAATGGTTAGACAAGTCGCTTTGCTGGAGACCAGTTCAG 2640 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2581 ACGCTAGTGACACCAGTAGAGAAATGGCTAGACAAGTCGCTTTGCTGGAGACCAGTTCAG 2640 Query 2641 ACAAGTGCACAACTTAACCCTATTCTATGGGAAGAACTCGCTCTGGCTCGAGCCACGGTG 2700 |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||| Sbjct 2641 ACAAGTGCACAACTAAACCCTATTCTATGGGAAGAACTTGCTCTAGCTCGAGCCACCGTG 2700 Query 2701 CTAGAGACTCGAGCTAAGCTGATGTTACGAGGCGGGCAGTTCGGTTTGGCTGATGATCT- 2759 |||||||||||||||||||||||||||||||||||||| || |||||||||||||| || Sbjct 2701 CTAGAGACTCGAGCTAAGCTGATGTTACGAGGCGGGCAATTTGGTTTGGCTGATGA-CTT 2759 Query 2760 GATCAGAAAAGCTATCTTTATAAGAACTTCGATCTCAGGAGAGGATCATCCTGGGACTGT 2819 |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2760 GATCAGAAAAGCAATCTTCATAAGAACTTCGATCTCAGGAGAGGATCATCCTGGGACTGT 2819 Query 2820 GTCGGCTCGAGAGACATTAAGTAAGTTAACGAGGCTTTTATCCAATGTTCATCAGATTCA 2879 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2820 GTCGGCTCGAGAGACATTGAGTAAGTTAACGAGGCTTTTATCCAATGTTCATCAGATTCA 2879 Query 2880 TAACACTTCACCGTAATAGAGAGAATTTTTTAGGGCTTTCTTGTTGTAAAAGTTATAT-G 2938 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 2880 TAACACTTCACCGTAATAGAGAGAAGCTTTTAGGGCTTTCTTGTTGTAAAAGTTATAAAG 2939 Query 2939 GTTAGATTTTCTTGttttttttttAATTATCATTATTTTAGTCATAAGAGTTAGATTTAT 2998 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2940 GTTAGAGTTTCTTGTTTTTTTTT-AATTATCATTATTTTAGTCATAAGAGTTAGATTTAT 2998 Query 2999 ACAGAAGGTTTAGTAATAAAAACA-CTGTTATGTAAGAAATTTGTCAGAGAATCCTTTTT 3057 |||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| Sbjct 2999 ACAGAAGGTTTAGTAATAAAAAAAACTGTTATCTAAGAAATTTGTCAGAGAATCCTTTTT 3058 Query 3058 T 3058 | Sbjct 3059 T 3059 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 152056004233 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5