BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492629
Length=1736
Score E
Sequences producing significant alignments: (Bits) Value
AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases super... 2405 0.0
AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases super... 2329 0.0
AT4G22410.1 | Symbols: | Ubiquitin C-terminal hydrolases super... 1583 0.0
AT4G22420.1 | Symbols: | Ubiquitin-specific protease family C1... 178 2e-43
> AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases superfamily
protein | chr4:11803831-11807258 REVERSE LENGTH=2181
Length=2181
Score = 2405 bits (1302), Expect = 0.0
Identities = 1446/1516 (95%), Gaps = 7/1516 (0%)
Strand=Plus/Plus
Query 178 GAGGGAAATGGTAACAAAGTGAGAGGAGAAG-T--GGTCGACGACGAAgatgatgatgat 234
|||||||||||||||||||||| |||||||| | || || | ||| || || || |||
Sbjct 521 GAGGGAAATGGTAACAAAGTGAAAGGAGAAGCTCAAGTAGAGGTCGATGACGACGAAGAT 580
Query 235 gatgatgatgatgCCTCGAAAGGGAGAGGAAAGCATTCACGCCATGTTGAAGTTCGTCGT 294
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 581 GATGATGATGATGCTTCGAAGGGGAGAGGAAAGCATTCACGCCATGTTGAAGTTCGTCGT 640
Query 295 GATTGTCCTTATCTTGATACCGTTAATCGTCAGGTGTTGGATTTTGATTTTGAGAGGTTT 354
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 641 GATTGTCCTTATCTTGATACTGTTAATCGTCAGGTGTTGGATTTTGATTTCGAGAGGTTT 700
Query 355 TGCTCTGTCTCCTTGTCAAATCTAAATGTGTATGCGTGTCTTGTTTGTGGGAAGTA-TTT 413
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 701 TGCTCTGTCTCATTGTCAAATCTGAATGTGTATGCGTGTCTTGTTTGTGGGAAGTACTTT 760
Query 414 CCAAGGAAGAAGCCAGAAGTCTCATGCTTATACACATAGCTTGGAAGCAGGACACCACGT 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 -CAAGGAAGAAGCCAGAAGTCTCATGCTTATACACATAGCTTGGAAGCAGGACACCACGT 819
Query 474 TTACATCAATCTTCTTACAGAGAAGGTTTATTGTCTTCCTGATAGTTATGAGATCAATGA 533
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 820 TTACATCAATCTTCTGACAGAGAAGGTTTATTGTCTTCCTGATAGTTACGAGATCAATGA 879
Query 534 CCCTTCTTTGGATGACATTCGACATGTTTTAAACCCAAGGTTTAGTAGAGCACAAGTAGA 593
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 880 CCCTTCTTTGGATGACATTCGCCATGTTTTAAACCCAAGGTTTAGTAGAGCACAAGTAAA 939
Query 594 CGAGCTTGACAAGAATAGGCAGTGGTCTAGGGCTCTTGATGGCTCCGACTATCTTCCGGG 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 940 CGAGCTTGACAAGAATAGGCAGTGGTCTAGGGCTCTTGATGGCTCCGACTATCTTCCAGG 999
Query 654 AATGGTGGGGTTGAACAACATACAAAAGACAGAGTTTGTGAATGTTACAATCCAGTCGTT 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 AATGGTGGGGTTGAACAACATACAAAAGACAGAGTTTGTGAATGTTACAATCCAGTCGTT 1059
Query 714 GATGAGAGTTACTCCTCTAAGGAATTTTTTCCTCATTCCTGAGAATTATCAGCATTGCAA 773
||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||
Sbjct 1060 GATGAGAGTTACTCCTCTAAGGAATTTCTTCCTCATTCCTGAAAATTATCAGCACTGCAA 1119
Query 774 GTCTCCTCTTGTTCACCGTTTTGGGGAACTCACTCGGAAGATCTGGCATGCTCGAAACTT 833
||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 1120 GTCTCCTCTTGGTCACCGTTTTGGGGAACTAACTCGCAAGATTTGGCATGCTCGAAACTT 1179
Query 834 TAAAGGACAGGTAAGTCCACATGAATTCTTGCAAGCTGTCATGAAAGCCAGCAAGAAACG 893
||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1180 TAAAGGACAAGTGAGTCCACATGAGTTCTTGCAAGCTGTCATGAAAGCCAGCAAGAAACG 1239
Query 894 CTTTAGGATAGGCCAACAGTCAGATCCAGTAGAGTTTATGTCGTGGCTCCTCAACACTTT 953
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 CTTTAGGATTGGCCAACAATCAGATCCAGTAGAGTTTATGTCGTGGCTCCTCAACACTTT 1299
Query 954 GCACATGGATCTTAGAACTTCAAAGGACGCCAGCAGTATCATCCACAAGTGCTTCCAGGG 1013
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1300 GCACATGGATCTTAGAACTTCAAAGGACGCTAGCAGTATCATCCACAAGTGCTTCCAGGG 1359
Query 1014 TGAGCTGGAGGTTGTGAGAGAGTATCAAGGCAATGAAAACAAAGAAATCTCCAGGATGCC 1073
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 TGAGTTGGAGGTTGTGAAAGAGTATCAAGGCAATGAAAACAAAGAAATCTCCAGGATGCC 1419
Query 1074 TTTTCTGATGCTTGGGCTAGATTTGCCACCGCCTCCTCTTTTCAAAGATGTCATGGAGAA 1133
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 GTTTCTGATGCTTGGGCTAGATTTGCCACCGCCTCCTCTTTTCAAAGATGTCATGGAGAA 1479
Query 1134 AAACATAATTCCGCAGGTTGCTCTATTCGATTTGTTGAAGAAGTTTGATGGAGAAACTGT 1193
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1480 AAACATTATTCCGCAGGTTGCTCTATTCGATTTATTGAAGAAGTTTGATGGAGAAACGGT 1539
Query 1194 GACAGAGGTGGTTCGCCCTAAGTTGGCCAGAATGAGATATCGTATAACCAAATCTCCTCC 1253
||||||||||||||| |||||| |||||||||||||||| ||| ||| |||||||||||
Sbjct 1540 GACAGAGGTGGTTCGGCCTAAGCTGGCCAGAATGAGATACCGTGTAATCAAATCTCCTCG 1599
Query 1254 TTACTTGATGTTCCATATGGTTCGGTTCAAGAAGAATAACTTCTTCAAAGAGAAAAACCC 1313
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1600 TTACTTGATGTTCCATATGGTTCGGTTCAAGAAGAATAACTTCTTCAAAGAGAAGAACCC 1659
Query 1314 TACCTTGGTTAACTTCCCAGTGAAGGACATGGAGCTGAGGGATTACATACCATCATTGCC 1373
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1660 TACATTGGTTAACTTCCCAGTGAAGGACATGGAGCTGAGGGATTACATACCATCATTGCC 1719
Query 1374 TAGAGCACCAGAAGGCGAGAAGGTGTGTTCGAAGTATAATCTAATCGCGAACATTGTACA 1433
||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 1720 TAGAGCACCAGAAGGGGAGAATGTGTGTTCAAAGTATAATCTAATCGCTAACATTGTACA 1779
Query 1434 TGATGGTAAGCCGGAGGACGGGTACTTCAGAGTCTTTGTGCAGCGCAAGTCACAAGAACT 1493
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1780 TGATGGTAAGCCTGAGGACGGGTACTTCAGAGTCTTTGTGCAGCGCAAGTCACAAGAACT 1839
Query 1494 ATGGTACGAGATGCAGGATCTTCATGTTGCAGAGACACTTCCCCAGATGGTGGAACTTTC 1553
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1840 ATGGTACGAGATGCAGGATCTTCATGTTGCAGAGACACTTCCCCAGATGGTAGAACTATC 1899
Query 1554 GGAAGCATACATGCAGATTTATGAGCAGCAGGATGAATAAAGAGCACTGGAAACATACTG 1613
|||||||||||||||||| |||||||||||||| ||||| |||| ||||||| | ||||
Sbjct 1900 GGAAGCATACATGCAGATATATGAGCAGCAGGAAGAATA--GAGCCCTGGAAAGAAACTG 1957
Query 1614 ACTTGATCTGGTTTAAGAGTAAAAGTTACCAGTTTTTTCTTGGAATGAGATTAGAGATTT 1673
|||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 1958 ACTTCATTTGGTTTAAGAGTAAAAGTGACCAGTTTTATCTTGGAATGAGATTAGAGATTT 2017
Query 1674 GTTTCACAACTCTTTT 1689
||||||||||||||||
Sbjct 2018 GTTTCACAACTCTTTT 2033
> AT4G22285.1 | Symbols: | Ubiquitin C-terminal hydrolases superfamily
protein | chr4:11778763-11782680 REVERSE LENGTH=2288
Length=2288
Score = 2329 bits (1261), Expect = 0.0
Identities = 1415/1489 (95%), Gaps = 12/1489 (1%)
Strand=Plus/Plus
Query 178 GAGGGAAATGGTAACAAAGTGAGAGGAGAAGTGGTCGACGACGAAgat-gatgatgatga 236
|||||||||||||||||||||| ||||||| | || | || | || | ||||| || ||
Sbjct 576 GAGGGAAATGGTAACAAAGTGAAAGGAGAA--GCTC-AAGAAG-AGGTCGATGACGACGA 631
Query 237 tgatgatgatgCCTCGAAAGGG--AGAGGAAAGCATTCACGCCATGTTGAAGTTCGTCGT 294
|||||||||| |||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct 632 AGATGATGATGTCTCG-AAGGGTAAG-GGAAAGCATTCACGCCATGTTGAAGTTCGCCGT 689
Query 295 GATTGTCCTTATCTTGATACCGTTAATCGTCAGGTGTTGGATTTTGATTTTGAGAGGTTT 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 GATTGTCCTTATCTTGATACCGTTAATCGTCAGGTGTTGGATTTTGATTTTGAGAGGTTT 749
Query 355 TGCTCTGTCTCCTTGTCAAATCTAAATGTGTATGCGTGTCTTGTTTGTGGGAAGTATTTC 414
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 750 TGCTCTGTGTCCTTGTCAAATCTGAATGTGTATGCGTGTCTTGTTTGTGGGAAGTACTTC 809
Query 415 CAAGGAAGAAGCCAGAAGTCTCATGCTTATACACATAGCTTGGAAGCAGGACACCACGTT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 CAAGGAAGAAGCCAGAAGTCTCATGCTTATACACATAGCTTGGAAGCAGGACACCACGTT 869
Query 475 TACATCAATCTTCTTACAGAGAAGGTTTATTGTCTTCCTGATAGTTATGAGATCAATGAC 534
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 870 TACATCAATCTTCTGACAGAGAAGGTTTATTGTCTTCCTGATAGTTACGAGATCAATGAC 929
Query 535 CCTTCTTTGGATGACATTCGACATGTTTTAAACCCAAGGTTTAGTAGAGCACAAGTAGAC 594
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 930 CCTTCTTTGGATGACATTCGCCATGTTTTAAACCCAAGGTTTAGTAGAGCACAAGTAAAC 989
Query 595 GAGCTTGACAAGAATAGGCAGTGGTCTAGGGCTCTTGATGGCTCCGACTATCTTCCGGGA 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 990 GAGCTTGACAAGAATAGGCAGTGGTCTAGGGCTCTTGATGGCTCCGACTATCTTCCAGGA 1049
Query 655 ATGGTGGGGTTGAACAACATACAAAAGACAGAGTTTGTGAATGTTACAATCCAGTCGTTG 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1050 ATGGTGGGGTTGAACAACATACAAAAGACAGAGTTTGTGAATGTTACAATCCAGTCGTTG 1109
Query 715 ATGAGAGTTACTCCTCTAAGGAATTTTTTCCTCATTCCTGAGAATTATCAGCATTGCAAG 774
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct 1110 ATGAGAGTTACTCCTCTAAGGAATTTCTTCCTCATTCCTGAAAATTATCAGCACTGCAAG 1169
Query 775 TCTCCTCTTGTTCACCGTTTTGGGGAACTCACTCGGAAGATCTGGCATGCTCGAAACTTT 834
||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct 1170 TCTCCTCTTGTTCACCGTTTTGGGGAACTAACTCGCAAGATTTGGCATGCTCGAAACTTT 1229
Query 835 AAAGGACAGGTAAGTCCACATGAATTCTTGCAAGCTGTCATGAAAGCCAGCAAGAAACGC 894
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1230 AAAGGACAAGTGAGTCCACATGAATTCTTGCAAGCTGTCATGAAAGCCAGCAAGAAACGG 1289
Query 895 TTTAGGATAGGCCAACAGTCAGATCCAGTAGAGTTTATGTCGTGGCTCCTCAACACTTTG 954
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1290 TTTAGGATTGGCCAACAATCAGATCCAGTAGAGTTTATGTCGTGGCTCCTCAACACTTTG 1349
Query 955 CACATGGATCTTAGAACTTCAAAGGACGCCAGCAGTATCATCCACAAGTGCTTCCAGGGT 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1350 CACATGGATCTTAGAACTTCAAAGGACGCCAGCAGTATCATCCACAAGTGCTTCCAGGGT 1409
Query 1015 GAGCTGGAGGTTGTGAGAGAGTATCAAGGCAATGAAAACAAAGAAATCTCCAGGATGCCT 1074
||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 1410 GAGTTGGAGGTTGTGAAAGAGTTTCAAGGCAATGAAAACAAAGAAATCTCCAGGATGTCT 1469
Query 1075 TTTCTGATGCTTGGGCTAGATTTGCCACCGCCTCCTCTTTTCAAAGATGTCATGGAGAAA 1134
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470 TTTCTGATGCTCGGTCTAGATTTGCCACCGCCTCCTCTTTTCAAAGATGTCATGGAGAAA 1529
Query 1135 AACATAATTCCGCAGGTTGCTCTATTCGATTTGTTGAAGAAGTTTGATGGAGAAACTGTG 1194
||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1530 AACATTATTCCGCAGGTTGCTCTATTTGATTTATTGAAGAAGTTTGATGGAGAAACTGTG 1589
Query 1195 ACAGAGGTGGTTCGCCCTAAGTTGGCCAGAATGAGATATCGTATAACCAAATCTCCTCCT 1254
|||||||||||||| |||||| |||||||||||||||| ||| ||| ||||||||||| |
Sbjct 1590 ACAGAGGTGGTTCGGCCTAAGCTGGCCAGAATGAGATACCGTGTAATCAAATCTCCTCGT 1649
Query 1255 TACTTGATGTTCCATATGGTTCGGTTCAAGAAGAATAACTTCTTCAAAGAGAAAAACCCT 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1650 TACTTGATGTTCCATATGGTTCGGTTCAAGAAGAATAACTTCTTCAAAGAGAAGAACCCT 1709
Query 1315 ACCTTGGTTAACTTCCCAGTGAAGGACATGGAGCTGAGGGATTACATACCATCATTGCCT 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1710 ACCTTGGTTAACTTCCCAGTGAAGGACATGGAGCTGAGGGATTACATACCATCATTGCCT 1769
Query 1375 AGAGCACCAGAAGGCGAGAAGGTGTGTTCGAAGTATAATCTAATCGCGAACATTGTACAT 1434
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 1770 AGAGCACCAGAAGGCGAGAATGTGTGTTCAAAGTATAATCTAATCGCTAACATTGTACAT 1829
Query 1435 GATGGTAAGCCGGAGGACGGGTACTTCAGAGTCTTTGTGCAGCGCAAGTCACAAGAACTA 1494
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1830 GATGGTAAGCCTGAGGACGGATACTTCAGAGTCTTTGTGCAGCGCAAGTCACAAGAACTA 1889
Query 1495 TGGTACGAGATGCAGGATCTTCATGTTGCAGAGACACTTCCCCAGATGGTGGAACTTTCG 1554
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1890 TGGTACGAGATGCAGGATCTTCATGTTGCAGAGACACTTCCCCAGATGGTAGAACTATCG 1949
Query 1555 GAAGCATACATGCAGATTTATGAGCAGCAGGATGAATAAAGAGCACTGGAAACATACTGA 1614
||||||||||||||||| ||||||||| |||| ||||| |||||||||||||| |||||
Sbjct 1950 GAAGCATACATGCAGATATATGAGCAGGAGGAGGAATA--GAGCACTGGAAACAAACTGA 2007
Query 1615 CTTGATCTGGTTT-AAGAGTAAAAGTTACCAGTTTTTTCTTGGAATGAG 1662
|| ||||||||| |||||||||||| |||||||| ||||||| ||||
Sbjct 2008 CTCCATCTGGTTTTAAGAGTAAAAGTGACCAGTTTAATCTTGGATTGAG 2056
> AT4G22410.1 | Symbols: | Ubiquitin C-terminal hydrolases superfamily
protein | chr4:11818213-11820135 REVERSE LENGTH=1023
Length=1023
Score = 1583 bits (857), Expect = 0.0
Identities = 951/998 (95%), Gaps = 0/998 (0%)
Strand=Plus/Plus
Query 324 TCAGGTGTTGGATTTTGATTTTGAGAGGTTTTGCTCTGTCTCCTTGTCAAATCTAAATGT 383
|||||||||||||||| |||||||||||||||||||||| |||||||| ||||| |||||
Sbjct 12 TCAGGTGTTGGATTTTCATTTTGAGAGGTTTTGCTCTGTGTCCTTGTCCAATCTGAATGT 71
Query 384 GTATGCGTGTCTTGTTTGTGGGAAGTATTTCCAAGGAAGAAGCCAGAAGTCTCATGCTTA 443
||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 72 ATATGCATGCCTTGTTTGTGGAAAGTACTTCCAAGGAAGAAGCCAGAAGTCTCATGCTTA 131
Query 444 TACACATAGCTTGGAAGCAGGACACCACGTTTACATCAATCTTCTTACAGAGAAGGTTTA 503
||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 132 TACGCATAGCTTAGAAGCAGGACACCACGTTTACATCAATCTTCTGACAGAGAAGGTTTA 191
Query 504 TTGTCTTCCTGATAGTTATGAGATCAATGACCCTTCTTTGGATGACATTCGACATGTTTT 563
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 192 TTGTCTTCCTGATAGTTACGAGATCAATGACCCTTCTTTGGATGACATTCGCCATGTTTT 251
Query 564 AAACCCAAGGTTTAGTAGAGCACAAGTAGACGAGCTTGACAAGAATAGGCAGTGGTCTAG 623
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 252 AAACCCAAGGTTTAGTAGAGCACAAGTAAACGAGCTTGACAAGAATAGGCAGTGGTCTAG 311
Query 624 GGCTCTTGATGGCTCCGACTATCTTCCGGGAATGGTGGGGTTGAACAACATACAAAAGAC 683
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 312 GGCTCTTGATGGCTCCGACTATCTTCCAGGAATGGTGGGGTTGAACAACATACAAAAGAC 371
Query 684 AGAGTTTGTGAATGTTACAATCCAGTCGTTGATGAGAGTTACTCCTCTAAGGAATTTTTT 743
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 372 AGAGTTTGTGAATGTTACAATCCAGTCGTTGATGAGAGTTACTCCTTTAAGGAATTTCTT 431
Query 744 CCTCATTCCTGAGAATTATCAGCATTGCAAGTCTCCTCTTGTTCACCGTTTTGGGGAACT 803
|| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 432 CCACATTCCTGAAAATTATCAGCACTGCAAGTCTCCTCTTGTTCACTGTTTTGGGGAACT 491
Query 804 CACTCGGAAGATCTGGCATGCTCGAAACTTTAAAGGACAGGTAAGTCCACATGAATTCTT 863
||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 492 AACTCGCAAGATTTGGCATGCTCGAAACTTTAAAGGACAGGTGAGTCCACATGAGTTCTT 551
Query 864 GCAAGCTGTCATGAAAGCCAGCAAGAAACGCTTTAGGATAGGCCAACAGTCAGATCCAGT 923
|||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct 552 GCAAGCTGTCATGAAAGCCAGCAAGAAACGCTTTCGGATTGGCCAACAATCAGATCCAGT 611
Query 924 AGAGTTTATGTCGTGGCTCCTCAACACTTTGCACATGGATCTTAGAACTTCAAAGGACGC 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 AGAGTTTATGTCGTGGCTCCTCAACACTTTGCACATGGATCTTAGAACTTCAAAGGACGC 671
Query 984 CAGCAGTATCATCCACAAGTGCTTCCAGGGTGAGCTGGAGGTTGTGAGAGAGTATCAAGG 1043
|||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||
Sbjct 672 CAGCAGTATCATCCACAAGTGCTTCCAGGGTGAGTTGGAGGTTGTGAAAGAGTTTCAAGG 731
Query 1044 CAATGAAAACAAAGAAATCTCCAGGATGCCTTTTCTGATGCTTGGGCTAGATTTGCCACC 1103
|||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||
Sbjct 732 CAATGAAAACAAAGAAATCTCCAGGATGTCTTTTCTGATGCTCGGTCTAGATTTGCCACC 791
Query 1104 GCCTCCTCTTTTCAAAGATGTCATGGAGAAAAACATAATTCCGCAGGTTGCTCTATTCGA 1163
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 792 GCCTCCTCTTTTCAAAGATGTCATGGAGAAAAACATTATTCCGCAGGTTGCTCTATTTGA 851
Query 1164 TTTGTTGAAGAAGTTTGATGGAGAAACTGTGACAGAGGTGGTTCGCCCTAAGTTGGCCAG 1223
||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 852 TTTATTGAAGAAGTTTGATGGAGAAACTGTGACAGAGGTGGTTCGGCCTAAGCTGGCCAG 911
Query 1224 AATGAGATATCGTATAACCAAATCTCCTCCTTACTTGATGTTCCATATGGTTCGGTTCAA 1283
||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 912 AATGAGATACCGTGTAATCAAATCTCCTCGTTACTTGATGTTCCATATGGTTCGGTTCAA 971
Query 1284 GAAGAATAACTTCTTCAAAGAGAAAAACCCTACCTTGG 1321
|||||||||||||||||||||||| |||||||| ||||
Sbjct 972 GAAGAATAACTTCTTCAAAGAGAAGAACCCTACATTGG 1009
> AT4G22420.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr4:11825614-11826432 REVERSE LENGTH=555
Length=555
Score = 178 bits (96), Expect = 2e-43
Identities = 137/156 (88%), Gaps = 5/156 (3%)
Strand=Plus/Plus
Query 178 GAGGGAAATGGTAACAAAGTGAGA-GGAGAAG-T--GGTCGACGACGAAgatgatgatga 233
|||||||||||||||||||||| | ||||||| | | || | ||| || || || ||
Sbjct 271 GAGGGAAATGGTAACAAAGTGA-ACGGAGAAGCTCAAGAAGAGGTCGATGACGAAGAAGA 329
Query 234 tgatgatgatgatgCCTCGAAAGGGAGAGGAAAGCATTCACGCCATGTTGAAGTTCGTCG 293
||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct 330 TGATGATGATGATGCTTCCAAGGGGAGAGGAAAGCATTCACGCCATGTTGAAGTTCGTCG 389
Query 294 TGATTGTCCTTATCTTGATACCGTTAATCGTCAGGT 329
|||||||||||||||||| || ||||||||||||||
Sbjct 390 TGATTGTCCTTATCTTGACACTGTTAATCGTCAGGT 425
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85842931950
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5