BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492631 Length=1559 Score E Sequences producing significant alignments: (Bits) Value AT4G22340.3 | Symbols: CDS2 | cytidinediphosphate diacylglycero... 2338 0.0 > AT4G22340.3 | Symbols: CDS2 | cytidinediphosphate diacylglycerol synthase 2 | chr4:11799959-11802828 REVERSE LENGTH=1742 Length=1742 Score = 2338 bits (1266), Expect = 0.0 Identities = 1407/1475 (95%), Gaps = 9/1475 (1%) Strand=Plus/Plus Query 19 TTTTTGGCTTATCAATGGTTTGTATTTGCC--ATTTTTTCTA-CTTTCTCAATTTGTATT 75 ||||||||||||||||| ||| || ||||| | | |||||| |||| | |||||||| Sbjct 132 TTTTTGGCTTATCAATGATTTTTAGTTGCCAGAGTCTTTCTATCTTT-T--TTTTGTATT 188 Query 76 TTGATGTTAGGCTATGGTGATCCTGGATGTAGTGAAGCTCAATTTTAATTTTGTTCACAG 135 ||| ||||| ||| |||||| || |||||| | ||| |||||||||| || ||||||| Sbjct 189 CTGACGTTAGACTAAGGTGATGCTAGATGTACTCAAGTTCAATTTTAA-ATT-TTCACAG 246 Query 136 GTAGTCAGTGTTTTTGTTTCCAACTCTGGGCAACATGCAAAAGGAAACGGCTGGTGATGC 195 |||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||| Sbjct 247 GTAGTCAGTGTTTTTGTTTCGAACTCT-TCCAACATGCAGAAGGAAATTGCTGGTGATGC 305 Query 196 TCCATCAGCACCTACCACTCGTGTTCGGCATCGGAAGCGGAACAGTGATGTTGGTGCAGG 255 |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 306 TCCATCAGCACCAACCACTCGTGTTCGGCATCGGAAGCGAAACAGCGATGTTGGTGCAGG 365 Query 256 GGCAGGCAAACCAAATGGAAGCCATTTACTTGTCAATGACAGCAAAAAATACAAATCGTT 315 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 366 GGCAGGCAAACCAAATGGAAACCATTTACTTGTCAATGACAGCAAAAAATACAAATCGTT 425 Query 316 TCTCATTCGAGCATACTCCACTGTCTGGATGATTGGTGGTTTTGCTCTAATAGTTTACCT 375 |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| Sbjct 426 TCTCATTCGAGCATACTCCACTTTCTGGATGATAGGTGGTTTTGCTCTTATAGTTTACCT 485 Query 376 GGGTCATCTCTACATTACAGCCATGGTGGTTGTTATTCAGATATTCATGGCACGAGAACT 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 GGGTCATCTCTACATTACAGCCATGGTGGTTGTTATTCAGATATTCATGGCACGAGAACT 545 Query 436 TTTCAATTTGCTAAGAAAAACTCATGAAGACAAACAGCTCCCTGGTTTTAGATTACTGAA 495 ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 546 TTTTAATTTGCTGAGAAAAACTCATGAAGATAAACAGCTCCCTGGTTTTAGATTACTGAA 605 Query 496 TTGGCACTTCTTTTTCACAGCAATGCTCTTTGTATATGGTCGAATACTTAGTCAACGGCT 555 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 606 TTGGCACTTCTTTTTTACAGCAATGCTCTTTGTATATGGTCGAATACTTAGTCAACGGCT 665 Query 556 AGTCAACACTGTGACTCCAGACAAAGTCCTATATCGACTGGTCACCAGCCTCATCAAATA 615 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 666 AGTCAACACTGTGACTCCAGACAAAGTCCTATATCGACTGGTCACAAGCCTCATCAAATA 725 Query 616 CCACATGGCAATCTGTTACTCCTTGTATATTTCTGGCTTTGTTTGGTTTATTCTGACGCT 675 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 726 CCACATGGCAATCTGTTACTCCTTGTATATTTCTGGCTTTGTTTGGTTTATTCTCACGCT 785 Query 676 GAAAAAGAAGATGTACAAGTATCAGTTTAGCCAATATGCATGGACACATATGATCTTAAT 735 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 786 GAAAAAGAAGATGTACAAATATCAGTTTAGCCAATATGCATGGACACATATGATATTAAT 845 Query 736 TGTGGTGTTTACTCAGTCCTCATTTACCGTGGCCAACATCTTTGAAGGAATCTTCTGGTT 795 |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct 846 TGTGGTGTTTACTCAGTCCTCATTCACTGTCGCCAACATCTTTGAAGGAATCTTCTGGTT 905 Query 796 TCTTCTTCCTGCATCACTTATCGTCATCAATGACATATTCGCATATATCTGTGGTTTCTT 855 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 906 TCTTCTTCCTGCATCACTTATCGTCATCAATGACATATTTGCATATATCTGTGGTTTCTT 965 Query 856 CTTTGGAAGAACACCATTGATCAAGTTATCACCAAAGAAAACATGGGAGGGTTTCATTGG 915 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 966 CTTTGGAAGAACACCGTTGATCAAGTTATCACCAAAGAAAACATGGGAGGGTTTCATTGG 1025 Query 916 AGCTTCTATTACCACAGTGATTTCTGCATTCCTGCTTGCAAATATAATGGGTCGTTTCCT 975 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1026 AGCTTCTATTACCACAGTGATTTCTGCATTCCTGCTTGCAAATATAATGGGTCGTTTCCT 1085 Query 976 GTGGCTGACATGTCCCAGAGAAGATCTATCGACAGGCTGGCTCCACTGTGACCCCGGTCC 1035 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 1086 GTGGCTGACATGTCCCAGAGAGGATCTATCGACAGGCTGGCTCCTCTGTGACCCTGGTCC 1145 Query 1036 ATTGTTCAAGCAAGAGACACATGCTTTACCAGGATGGATTTCTGATTGGCTCCCTTGGAA 1095 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1146 ACTGTTCAAGCAAGAGACACATGCTTTACCAGGATGGATTTCTGATTGGCTCCCTTGGAA 1205 Query 1096 GGAAATTTCTATTCTACCAGTTCAGTGGCATGCTCTGTGTCTTGGATTGTTCGCCTCTAT 1155 ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1206 GGAAATTTCGATTCTACCAGTCCAGTGGCATGCTCTATGTCTTGGATTGTTCGCCTCTAT 1265 Query 1156 AATAGCTCCTTTTGGTGGCTTCTTTGCCAGTGGTTTCAAAAGAGCATTCAAAATCAAGGA 1215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1266 AATAGCTCCTTTTGGTGGCTTCTTTGCCAGTGGTTTCAAAAGAGCATTCAAAATCAAGGA 1325 Query 1216 CTTTGGTGATAGTATTCCTGGACATGGCGGAATCACAGATAGAATGGATTGTCAGATGGT 1275 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 1326 CTTTGGTGATAGTATTCCCGGACATGGCGGAATTACAGATAGAATGGATTGTCAGATGGT 1385 Query 1276 GATGGCTGTTTTTGCATATATATATCATCAATCGTTTGTTGTACCTGAAGTCCTCTCTGT 1335 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1386 GATGGCTGTTTTTGCCTATATATATCATCAATCGTTTGTTGTACCTGAAGTCCTCTCTGT 1445 Query 1336 GGATAAGCTCTTAGACCAGATAATCACAAGCCTGACATTGGAAGAACAACAAGCTCTATT 1395 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 1446 GGATAAGCTCTTAGACCAGATAATCACAAGCCTGACATTGGAAGAACAACAAGCGCTACT 1505 Query 1396 CATGAAGCTTGGGCAAATGTTGCAGGAAAAGGTTATTGGATCTTAGATCATCACAACCCT 1455 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1506 CGTGAAGCTTGGCCAAATGTTGCAGGAAAAGGTTATTGGATCTTAGATCATCACAACCCG 1565 Query 1456 TCATTGTATACCATATTACTCTTCTTCTGTGTTAC 1490 |||||||||||||||||||||| |||| ||||||| Sbjct 1566 TCATTGTATACCATATTACTCTGCTTCCGTGTTAC 1600 Score = 71.3 bits (38), Expect = 3e-11 Identities = 38/38 (100%), Gaps = 0/38 (0%) Strand=Plus/Plus Query 1522 CTTTATGAAAGAAAAGAAGCTCACTACAATTCTCTTAC 1559 |||||||||||||||||||||||||||||||||||||| Sbjct 1705 CTTTATGAAAGAAAAGAAGCTCACTACAATTCTCTTAC 1742 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76957435485 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5