BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492644 Length=304 Score E Sequences producing significant alignments: (Bits) Value AT4G22217.1 | Symbols: | Arabidopsis defensin-like protein | c... 436 4e-122 > AT4G22217.1 | Symbols: | Arabidopsis defensin-like protein | chr4:11758608-11759072 FORWARD LENGTH=387 Length=387 Score = 436 bits (236), Expect = 4e-122 Identities = 282/304 (93%), Gaps = 3/304 (1%) Strand=Plus/Plus Query 1 ACAAAGAGAGATCAGCAATGAGGAGCTTGAAGTTGAGAACAGTTTTTGTTGCTGCAATAG 60 |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| Sbjct 1 ACAAAGAGAGATCAGCAATGAGGAGCTTGAGGTTGAGAACAGTTGTTGTTGCTACAATAG 60 Query 61 TCGTTTGTCTCTCTATCCTCTTCCTATCTCCCACTGAAGTGGAGGGAAGCTGTGACTTCC 120 |||||||||| || | | | ||||||||||||| |||||||| |||||||||||||||| Sbjct 61 TCGTTTGTCTATCGGT-C-C-TCCTATCTCCCACCGAAGTGGATGGAAGCTGTGACTTCC 117 Query 121 CATTTGGTGCGTGTACCCCTTTCCGTGATTGCAAGGAGAGTTGCATCAAGTTCAAAACGA 180 |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 CATTAGGTGCTTGTACTCCTTTCCGTGATTGCAAGGAGAGTTGCATCAAGTTCAAAACGA 177 Query 181 GGGCTGGACAGACtttttttGATGGCAAGTGCCGTCCGAGGGATAGACCAAGTGTGTGGA 240 ||||||||||||||||||||||||||||||||||||| |||||||| || || ||||||| Sbjct 178 GGGCTGGACAGACTTTTTTTGATGGCAAGTGCCGTCCAAGGGATAGGCCGAGCGTGTGGA 237 Query 241 CGGCTTGCTTCTGCTGCTATTATGATAGTATCGGTGCTCAATAAGAAAGCATGCGATTCC 300 ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 238 CGGCTTGTTTCTGCTGCTATTATGATAGTATCGGTGCTCAATAAGAAAACATGTGATTCC 297 Query 301 AAAA 304 ||| Sbjct 298 GAAA 301 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14074969720 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5