BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492658
Length=2920
Score E
Sequences producing significant alignments: (Bits) Value
AT4G22120.1 | Symbols: | ERD (early-responsive to dehydration ... 3871 0.0
AT4G04340.2 | Symbols: | ERD (early-responsive to dehydration ... 2134 0.0
> AT4G22120.1 | Symbols: | ERD (early-responsive to dehydration
stress) family protein | chr4:11715824-11719792 REVERSE LENGTH=2819
Length=2819
Score = 3871 bits (2096), Expect = 0.0
Identities = 2287/2379 (96%), Gaps = 13/2379 (1%)
Strand=Plus/Plus
Query 464 GGTTGAATTTTTAGTTAAGGGAGATGGCGACACTTCAGGATATTGGTGTATCAGCTGGGA 523
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 331 GGTTGAATTGTTAGTTAA--TAGATGGCGACACTTCAGGATATTGGTGTATCAGCTGGGA 388
Query 524 TAAACATTCTCAGTGCATTTGTTTTCTTCATCATCTTTGCTATTTTGAGGCTTCAGCCTT 583
|||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||
Sbjct 389 TAAACATTCTCAGTGCCTTTGTTTTCTTCATAATCTTTGCGGTTTTGAGGCTTCAGCCTT 448
Query 584 TCAATGATAGAGTTTACTTCTCAAAATGGTATCTCAAGGGGTTAAGAAGCAGCCCTTCGC 643
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 449 TCAATGATAGAGTTTACTTCTCAAAATGGTATCTCAAGGGGTTAAGAAGCAGCCCTGCTC 508
Query 644 GTGGTGGCGCCTTTGCGCAGCGCTTTGTGAACCTGGACTTCAGGTCTTATGTGAAGTTCT 703
|||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||
Sbjct 509 GTGGTGGCGCCTTTGCGCAGAGGTTTGTGAACCTGGACTTCAGGTCTTATATGAAGTTCT 568
Query 704 TGAATTGGATGCCAGAGGCTTTGAAGATGCCTGAGCCTGAGCTGATTGATCATGCTGGTT 763
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 569 TGAATTGGATGCCAGAGGCTCTGAAGATGCCTGAGCCTGAGCTTATTGATCATGCTGGTT 628
Query 764 TGGATTCAGTTGTTTATCTCCGGATTTACTGGCTGGGGCTGAAGATCTTTGCTCCAATAG 823
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 629 TGGATTCAGTTGTTTATCTCCGGATTTACTGGCTGGGGCTTAAGATCTTTACTCCAATAG 688
Query 824 CAGTGCTTGCTTGGGCAGTTCTTGTGCCAGTCAACTGGACAAATAACACACTGGAGATGG 883
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 689 CAGTGCTTGCTTGGGCAGTTCTTGTGCCAGTCAACTGGACTAATAACACATTGGAGATGG 748
Query 884 CTAAACAGCTAAGGAATGTAACTTCGAGCGACATTGACAAACTCTCTGTTTCAAATATTC 943
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 749 CTAAGCAGTTAAGGAATGTAACTTCGAGCGACATTGACAAACTCTCTGTTTCAAATATTC 808
Query 944 CAGAGTATTCAATGAGGTTTTGGACTCATATAGTAATGGCTTATGCCTTTACCATCTGGA 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 CAGAGTATTCAATGAGGTTTTGGACTCATATAGTAATGGCTTATGCCTTTACCATCTGGA 868
Query 1004 CTTGTTATGTGCTGATGAAAGAATATGAGACAATTGCTAACATGAGGCTCCAGTTTGTTG 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 869 CTTGTTATGTGCTGATGAAAGAATATGAGACAATTGCTAACATGAGGCTCCAGTTTGTTG 928
Query 1064 CATCTGAAGCTCGTCGACCTGACCAGTTCACTGTTCTGGTTAGGAATGTACCTCCGGACG 1123
|||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 929 CATCAGAAGCTCGTCGACCTGACCAGTTCACTGTCCTTGTTAGGAATGTACCTCCGGACG 988
Query 1124 CAGATGAATCTGTAAGTGAACTGGTGGAGCATTTTTTCCTGGTCAATCATCCTGATCACT 1183
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 989 CAGATGAATCTGTAAGTGAACTGGTAGAGCATTTTTTCCTGGTCAATCATCCTGATCACT 1048
Query 1184 ACCTGACACATCAGGCAAATGTTGTATGCAATGCAAACAAGCTTGCCGATTTGGTGAAAA 1243
|||| |||||||||| | | |||||||||||||||||||| ||||||||||||||||
Sbjct 1049 ACCTAACACATCAGG----T-T-GTATGCAATGCAAACAAGCTGGCCGATTTGGTGAAAA 1102
Query 1244 AGAAGAAAAAGCTGCAGAATTGGCTTGATTACTACCAGCTCAAATACGCTAGGAAAAACT 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1103 AGAAGAAAAAGCTGCAGAATTGGCTTGATTACTACCAGCTCAAATACGCTAGGAATAACT 1162
Query 1304 CTCAGAGAATTATGGTGAAGCTTGGCTTTCTTGGGCTATGGGGACAAAAAGTCGATGCCA 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163 CTCAGAGAATTATGGTGAAGCTTGGCTTTCTTGGGCTATGGGGACAAAAAGTCGATGCCA 1222
Query 1364 TTGAACATTACATTGCTGAAATTGACAAAATATCAAAAGAGATCAGTAAAGAAAGAGAGG 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1223 TTGAACATTACATTGCTGAAATTGACAAAATATCAAAAGAGATCAGTAAAGAAAGAGAGG 1282
Query 1424 AAGTGGTGAATGATCCCAAGTCCATTATGCCAGCTGCATTTGTCTCCTTTAAAACCCGAT 1483
|||||||||||||||| ||| ||||||||||||| || ||||||||||||||||| ||||
Sbjct 1283 AAGTGGTGAATGATCCTAAGGCCATTATGCCAGCAGCGTTTGTCTCCTTTAAAACACGAT 1342
Query 1484 GGGCTGCTGCTGTTTGTGCTCAGACTCAACAGACCCGAAACCCAACCCAGTGGCTGACCG 1543
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1343 GGGCTGCTGCGGTTTGTGCTCAGACTCAACAGACCCGAAACCCAACCCAATGGCTGACCG 1402
Query 1544 AATGGGCTCCAGAACCGCGTGATGTGTTTTGGTCAAATCTTGCTATTCCATATGTTTCTT 1603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1403 AATGGGCTCCAGAACCGCGTGATGTGTTTTGGTCAAATCTTGCTATTCCATATGTTTCTC 1462
Query 1604 TGACAGTAAGGAGGTTAATCATGCATGTTGCCTTCTTCTTCCTAACCTTCTTCTTCATTA 1663
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463 TGACAGTAAGGAGGTTGATCATGCATGTTGCCTTCTTCTTCCTAACCTTCTTCTTCATTG 1522
Query 1664 TCCCCATCGCGTTTGTTCAATCTCTTGCTACCATTGAAGGGATTGTGAAAGCTGCTCCGT 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1523 TCCCCATCGCGTTTGTTCAATCTCTTGCTACCATTGAAGGGATTGTGAAAGCTGCTCCGT 1582
Query 1724 TCTTGAAGTTTATTGTAGAGGATAAATTCATGAAATCGGTGATACAAGGTTTTCTACCGG 1783
||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct 1583 TCTTGAAGTTTATTGTAGATGATAAATTCATGAAATCGGTGATACAAGGTTTCCTTCCGG 1642
Query 1784 GTATCGCACTGAAGATTTTCCTCGCCTTTCTGCCATCCATTCTGATGGTCATGTCCAAAT 1843
|||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1643 GTATTGCACTGAAGCTTTTCCTCGCCTTTCTGCCATCCATTTTGATGATCATGTCCAAAT 1702
Query 1844 TTGAAGGCTTCACATCGATCTCATCTTTAGAGAGACGAGCAGCGTTTCGATATTACATCT 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTGAAGGCTTCACATCGATCTCATCTTTAGAGAGACGAGCAGCGTTTCGATATTACATCT 1762
Query 1904 TCAACTTGGTGAACGTCTTTCTTGCAAGTGTTATCACTGGAGCTGCGTTCGAACAGCTTA 1963
||||||| ||||||||||||||||| || |||||| ||||||||||||| ||||||||||
Sbjct 1763 TCAACTTAGTGAACGTCTTTCTTGCTAGCGTTATCGCTGGAGCTGCGTTTGAACAGCTTA 1822
Query 1964 ACTCTTTCCTCAATCAATCCCCAAACCAAATCCCCAAAACCATTGGTGTGGCGATACCGA 2023
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1823 ACTCTTTCCTCAATCAATCCGCAAACCAAATCCCCAAAACCATTGGTGTGGCGATACCGA 1882
Query 2024 TGAAAGCAACTTTCTTCATCACGTATATAATGGTTGATGGTTGGGCAGGAGTTGCAGGAG 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1883 TGAAAGCAACTTTCTTCATCACGTATATAATGGTTGATGGTTGGGCAGGAGTTGCAGGAG 1942
Query 2084 AGATTCTAATGCTGAAACCACTGATTATGTTCCATCTCAAAAACGCCTTCTTGGTTAAGA 2143
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1943 AGATTCTAATGCTGAAACCATTGATTATGTTCCATCTCAAAAACGCCTTCTTGGTTAAGA 2002
Query 2144 CTGAGAAAGACAGAGAAGAAGCAATGGACCCGGGAAGCATCGGTTTTAACACAGGCGAGC 2203
|||| ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 2003 CTGATAAAGACAGAGAGGAAGCAATGGACCCGGGAAGCATTGGTTTTAACACGGGTGAGC 2062
Query 2204 CTCGGATACAGCTCTACTTTCTTCTCGGTCTTGTCTACGCTCCCGTGACACCGATGCTTC 2263
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2063 CTCGGATACAGCTCTACTTTCTTCTCGGTCTTGTCTACGCTCCTGTGACACCGATGCTTC 2122
Query 2264 TTCCTTTTATCTTAGTCTTCTTCGCCCTTGCTTACATTGTGTATCGCCACCAAATCATTA 2323
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2123 TTCCTTTTATCTTGGTCTTCTTCGCCCTTGCTTACATTGTATATCGCCACCAAATCATTA 2182
Query 2324 ACGTATACAACCAAGAATACGAGAGCGCTGCAGCGTTTTGGCCAGACGTTCATGGACGAG 2383
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2183 ACGTATACAATCAAGAATACGAGAGTGCTGCAGCGTTTTGGCCAGACGTTCATGGACGAG 2242
Query 2384 TCATAGCGGCATTAATAATATCACAGTTGCTTCTGATGGGTCTATTGGGAACAAAGCACG 2443
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2243 TCATAGCAGCATTGGTAATATCACAGTTGCTTCTGATGGGTCTATTGGGAACAAAGCACG 2302
Query 2444 CTGCATTAGCTGCACCTTTTCTCATTGCTTTGCCTGTGCTTACCATCGGTTTCCACCACT 2503
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2303 CTGCATTAGCTGCACCGTTTCTCATTGCTTTGCCTGTGCTTACCATTGGTTTCCACCACT 2362
Query 2504 TCTGCAAAGGTCGTTATGAGCCAGCCTTCATCAGATACCCTTTACAGGAAGCTATGATGA 2563
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2363 TCTGCAAAGGTCGTTATGAGCCAGCTTTCATCAGATACCCTTTACAGGAAGCTATGATGA 2422
Query 2564 AAGATACATTGGAAAGCGCAAGAGAACCAAACCTCAACCTTAAAGGCTACTTGCAAAATG 2623
|||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2423 AAGATACATTAGAAACCGCAAGAGAACCAAACCTGAACCTTAAAGGCTACTTGCAAAATG 2482
Query 2624 CTTACATTCATCCAGTTTTCAAAGGCGATGAAGACGATGATGACATTGATGACAAGCTCG 2683
||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2483 CTTACGTTCATCCGGTTTTCAAAGGCGATGAAGACGATTATGACATTGATGACAAGCTCG 2542
Query 2684 GGAAGTTTGAGGATGAAGCCATCATTGTTCCCACCAAACGTCAGTCGCGGAGAAATACTC 2743
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 2543 GGAAGTTTGAGGATGAAGCCATTATTGTTCCCACCAAACGTCAGTCGAGGAGAAATACTC 2602
Query 2744 CGGCTCCTAGCAGAATCAGTGGGGAAGATTCGCCGTCTTTGCCCTTTAGTGGTAAACTAG 2803
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2603 CGGCTCCTAGCATAATCAGTGGGGACGATTCGCCGTCTTTGCCCTTTAGTGGTAAACTAG 2662
Query 2804 TCTAGTCTAAGAGAAGCTTTGCTCATGATCAAAAGAAAG 2842
|||| | ||||||||| |||||| |||||||||||
Sbjct 2663 TCTA----A-GAGAAGCTTCACTCATGGTCAAAAGAAAG 2696
Score = 150 bits (81), Expect = 6e-35
Identities = 117/132 (89%), Gaps = 12/132 (9%)
Strand=Plus/Plus
Query 100 TTTGTGTGTTGC--GTGTTACTAAATCACTGACGAGGGT-----G---CACaaaa-aaaa 148
|||||||||||| |||||||||||||||||| |||||| | |||||| ||||
Sbjct 204 TTTGTGTGTTGCGTGTGTTACTAAATCACTGAAGAGGGTAAAGAGAAAAACAAAACAAAA 263
Query 149 aGGTTCTTAGCTTTGGATGAATCTGGAAGTGATCCAAAACACTGGCTTATTCCACTCCTC 208
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 264 A-GTTCTTAGCTTTGGATGAATCTGGAAGTGATCCAAAACACTGGCTTATTCCACTCCTC 322
Query 209 TTCTTTAGGGTT 220
|||| |||||||
Sbjct 323 TTCTCTAGGGTT 334
Score = 139 bits (75), Expect = 1e-31
Identities = 91/99 (92%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 1 ACTCTCTTAAATCTTAACCCTTTGTTCGTAACTGCTTCTCTTATCAGTTTCTATAGCAAC 60
|||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||
Sbjct 61 ACTCTCTTAAATCTTAACCCTTCGTCCGTAACTGCTTCTCTTGTCAGTTTCTATAGCAAC 120
Query 61 ATTATCTCAAACAGTTCTCTAGATAAATATTATAACAAA 99
||||||||||| |||||| | ||||||| ||||| ||||
Sbjct 121 ATTATCTCAAATAGTTCTATTGATAAATTTTATATCAAA 159
> AT4G04340.2 | Symbols: | ERD (early-responsive to dehydration
stress) family protein | chr4:2122908-2126844 FORWARD LENGTH=2790
Length=2790
Score = 2134 bits (1155), Expect = 0.0
Identities = 1970/2360 (83%), Gaps = 69/2360 (3%)
Strand=Plus/Plus
Query 487 ATGGCGACACTTCAGGATATTGGTGTATCAGCTGGGATAAACATTCTCAGTGCATTTGTT 546
||||| |||||| | || |||||||||||||| ||||||||||| |||| |||||| ||
Sbjct 252 ATGGCAACACTTAAAGACATTGGTGTATCAGCAGGGATAAACATCCTCACTGCATTCATT 311
Query 547 TTCTTCATCATCTTTGC-TATTTTGAGGCTTCAGCCTTTCAATGATAGAGTTTACTTCTC 605
|||||||| |||||||| | |||| ||||||||||| ||||| || ||||||||||||||
Sbjct 312 TTCTTCATAATCTTTGCGT-TTTTAAGGCTTCAGCCATTCAACGACAGAGTTTACTTCTC 370
Query 606 AAAATGGTATCTCAAGGGGTTAAGAAGCAGCCCTTCGCGTGGTGGCGCCTTTGCGCAGCG 665
|||||||| |||| ||||||||||||||||||| | |||| |||| || ||| |||
Sbjct 371 CAAATGGTACCTCAGGGGGTTAAGAAGCAGCCCTGCAAGTGGCGGCGGATTCGCGGGGCG 430
Query 666 CTTTGTGAACCTGGACTTCAGGTCTTATGTGAAGTTCTTGAATTGGATGCCAGAGGCT-T 724
|||||||| |||| || || || || | ||||||||| |||||||||| || ||| |
Sbjct 431 GTTTGTGAATTTGGAGTTGAGATCATACCTCAAGTTCTTGCATTGGATGCCTGAAGCTCT 490
Query 725 TGAAGATGCCTGAGCCTGAGCTGATTGATCATGCTGGTTTGGATTCAGTTGTTTATCTCC 784
| ||||||||||||| |||||||||||||||||||||||| || || ||||| |||||||
Sbjct 491 T-AAGATGCCTGAGCGTGAGCTGATTGATCATGCTGGTTTAGACTCTGTTGTCTATCTCC 549
Query 785 GGATTTACTGGCTGGGGCTGAAGATCTTTGCTCCAATAGCAGTGCTTGCTTGGGCAGTTC 844
||||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||
Sbjct 550 GGATTTACTGGCTCGGGCTTAAGATTTTTGCTCCAATAGCAATGCTTGCTTGGGCAGTTC 609
Query 845 TTGTGCCAGTCAACTGGACAAATAACACA-CTGGAGATGGCTAAACA-GCTAAGGAATGT 902
|||| || || || |||||||| ||| | ||||| ||||||| || ||| ||||||
Sbjct 610 TTGTACCGGTTAATTGGACAAACAAC-GAGTTGGAGTTGGCTAAGCATTTTAA-GAATGT 667
Query 903 AACTTCGAGCGACATTGACAAACTCTCTGTTTCAAATATTCCAG-AGTATTC-AATGAGG 960
||||| || || ||||||||||| | |||| ||||| |||| || ||| ||| |||
Sbjct 668 GACTTCAAGTGATATTGACAAACTAACAATTTCGAATATCCCAGAAG-GTTCAAAT-AGG 725
Query 961 TTTTGGACTCATAT-AGTAATGGCTTATGCCTTTACCATCTGGACTTGTTATGTGCTGAT 1019
|||||| ||||||| | ||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 726 TTTTGGGCTCATATCA-TAATGGCTTATGCCTTTACAATCTGGACTTGTTATATGCTGAT 784
Query 1020 GAAAGAATATGAGACAATTGCTAACATGAGGCTCCAGTTTGTTGCATCTGAA-GCTCGTC 1078
||| || ||||||||| |||||||||||||||| |||||| |||| || ||| || ||||
Sbjct 785 GAAGGAGTATGAGACAGTTGCTAACATGAGGCTTCAGTTTCTTGCCTCAGAAGGC-CGTC 843
Query 1079 GACCTGACCAGTTCACTGTTCTGGTTAGGAATGTACCTCCGGACGCAGATGAATCTGTAA 1138
|||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||| |
Sbjct 844 GACCTGACCAGTTCACTGTTCTTGTTAGGAATGTACCTCCGGACCCAGACGAAACTGTGA 903
Query 1139 GTGAACTGGTGGAGCATTTTTTCCTGGTCAATCATCCTGATCACTACCTGACACATCAGG 1198
|||| || ||||||||||||||||| || ||||| |||||| ||||||| |||||||| |
Sbjct 904 GTGAGCTTGTGGAGCATTTTTTCCTAGTTAATCACCCTGATAACTACCTCACACATCA-G 962
Query 1199 CAAATGTTGTATGCAATGCAAACAAGCTTGCCGATTTGGTGA-AAAAGAAGAAAAAGCTG 1257
||||||||||||||||||||||| || |||||||| | ||| |||| ||||||
Sbjct 963 -----GTTGTATGCAATGCAAACAAGCTCGCGGATTTGGTTAGTAAA-AAGACGAAGCTG 1016
Query 1258 CAGAATTGGCTTGATTACTACCAGCTCAAATACGCTAGGAAA-AACTCTCAG---AGAAT 1313
||||| |||||||| || || |||||||||||| ||| |||| || |||||| |||
Sbjct 1017 CAGAACTGGCTTGACTATTATCAGCTCAAATACACTA-GAAATAATTCTCAGATCAGACC 1075
Query 1314 TATGGTGAAGCTTGGCTTTCTTGGGC-TATGGGGACAAAAAGTCGATGCCATTGAACATT 1372
||| ||||||||| | ||| ||| | || ||||||||||| || || || |||||||
Sbjct 1076 TATAACGAAGCTTGGGTGCCTT-GGCTTGTGTGGACAAAAAGTTGACGCAATCGAACATT 1134
Query 1373 ACATTGCTGAAATTGACAAAATATCAAAAGAGATCAG-TAAAGAAAGAGAGGAA-GTGGT 1430
||||||||||| | || |||| |||||||||||| | | |||| ||||| ||| |||||
Sbjct 1135 ACATTGCTGAAGTAGATAAAACATCAAAAGAGAT-TGCTGAAGAGAGAGA-GAATGTGGT 1192
Query 1431 GAATGATCCCAAGTCCA-TTATGCCAGC-TGCATTTGTCTCCTTT-AAAACCCGATGGGC 1487
|||||||| |||| || | |||||||| | | ||||||| |||| |||||||| |||||
Sbjct 1193 GAATGATCAAAAGT-CAGTCATGCCAGCAT-CTTTTGTCT-CTTTCAAAACCCGTTGGGC 1249
Query 1488 TGCTGCTGTTTGTGCTCAGACTCA-ACAGACCCGAAACCCAACCCAGTGGCTGACCGAAT 1546
|||||||||||| |||||||| || ||||||||||||||||| | ||| | |||||||
Sbjct 1250 TGCTGCTGTTTGCGCTCAGAC-CACGCAGACCCGAAACCCAACTGAATGGTTAACCGAAT 1308
Query 1547 GGGCTCCAGAACCGCGTGATGTGTTTTGGTCAAATCTTGCTATTCCATATGTTTCTTTGA 1606
||||| |||| ||||||||| | | |||| |||| || || |||||||||||||||||||
Sbjct 1309 GGGCTGCAGAGCCGCGTGATATATATTGGCCAAACCTAGCGATTCCATATGTTTCTTTGA 1368
Query 1607 CAGTAAGGAGGTTAATCATGCATGTTGCCTTCTTCTTCCTAACCTTCTTCTTCATTATCC 1666
| || || || || | ||| |||| |||||||||||||| |||||||| ||||| ||||
Sbjct 1369 CTGTGAGAAGATTGGTTATGAATGTAGCCTTCTTCTTCCTTACCTTCTTTTTCATCATCC 1428
Query 1667 CCATCGCGTTTGTTCAATCTCTTGCTACCATTGAAGGGATTGTGAAAGCTGCTCCGTTCT 1726
| ||||||||||| ||||||||||||||||||||||| |||| ||||| ||| |||||||
Sbjct 1429 CTATCGCGTTTGTACAATCTCTTGCTACCATTGAAGGAATTGAGAAAGTTGCACCGTTCT 1488
Query 1727 TG-AAGTTTATTGTAGAGGATAA-A-TTCATGAAATCGGTGATACAAGGTTTTCTA-CCG 1782
|| ||| | ||| | || | || | ||||| |||||| ||||||||||||| ||| ||
Sbjct 1489 TGAAAG-TCATTATCGA--AAAAGATTTCATAAAATCGCTGATACAAGGTTTGCTAGCC- 1544
Query 1783 GGTATCGCACTGAAGATTTTCCTCGCCTTTCTGCCATCCATTCTGATGGTCATGTCCAAA 1842
||||| || ||||| |||||||| |||||||||| |||| |||||| ||||||||||
Sbjct 1545 GGTATTGCGTTGAAGCTTTTCCTCATCTTTCTGCCAGCCATACTGATGACCATGTCCAAA 1604
Query 1843 TTTGAAGGCTTCACATCGA-TCTCA-TCTTTAGAGAGACGAGCAGCGTTTCGATATTACA 1900
||||||||||| || || | | ||| || ||||| |||||| | |||| | |||||||||
Sbjct 1605 TTTGAAGGCTTTACTTC-AGTTTCATTC-TTAGAAAGACGATCCGCGTCTAGATATTACA 1662
Query 1901 TCTTCAACTTGGTGAACGTCTTTCTTGCAAGTGTTATCACTGGAGCTGCGTTCGAACAGC 1960
|||| ||||| |||||||||||||||| |||||||||| ||||||||||||| || ||||
Sbjct 1663 TCTTTAACTTAGTGAACGTCTTTCTTGGAAGTGTTATCGCTGGAGCTGCGTTTGAGCAGC 1722
Query 1961 TTAACTCTTTCCTCAATCAATCCCCAAACCAAATCCCCAAAACCATTGGTGTGGCGATAC 2020
|||||||||||||||||||||| || || |||||||| || || ||||| |||||||||
Sbjct 1723 TTAACTCTTTCCTCAATCAATCGCCTAATCAAATCCCTAAGACTATTGGCATGGCGATAC 1782
Query 2021 CGATGAAAGCAACTTTCTTCATCACGTATATAATGGTTGATGGTTGGGCAGGAGTTGCAG 2080
||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1783 CGATGAAAGCAACCTTCTTTATCACATATATAATGGTTGATGGTTGGGCAGGAGTTGCAG 1842
Query 2081 GAGAGATTCTAATGCTGAAACCACTGATTATGTTCCATCTCAAAAACGCCTTCTTGGTTA 2140
|||||||||| ||| ||||||| || ||||| | ||| ||||||||||| |||||||| |
Sbjct 1843 GAGAGATTCTTATGTTGAAACCTCTCATTATATACCACCTCAAAAACGCATTCTTGGTGA 1902
Query 2141 AGACTGAGAAAGACAGAGAAGAAGCAATGGACCCGGGAAGCATCGGTTTTAACACAGGCG 2200
| || |||||||||||||| ||||||||| ||||||||||||||||||| ||||| || |
Sbjct 1903 AAACAGAGAAAGACAGAGAGGAAGCAATGAACCCGGGAAGCATCGGTTTCAACACTGGAG 1962
Query 2201 AGCCTCGGATACAGCTCTACTTTCTTCTCGGTCTTGTCTACGCTCCCGTGACACCGATGC 2260
|||||| ||||||||| ||||| ||||| ||||||||||| ||||| |||||||| ||||
Sbjct 1963 AGCCTCAGATACAGCTTTACTTCCTTCTTGGTCTTGTCTATGCTCCTGTGACACCAATGC 2022
Query 2261 TTCTTCCTTTTATCTTAGTCTTCTTCGCCCTTGCTTACATTGTGTATCGCCACCAAATCA 2320
|||||||||||||||||||||| ||||| |||||||| | || || ||||| || ||||
Sbjct 2023 TTCTTCCTTTTATCTTAGTCTTTTTCGCTCTTGCTTATGTCGTATACCGCCATCAGATCA 2082
Query 2321 TTAACGTATACAACCAAGAATACGAGAGCGCTGCAGCGTTTTGGCCAGACGTTCATGGAC 2380
| || || || || ||||| || ||||||||||| ||||||||||| || ||||||||||
Sbjct 2083 TAAATGTGTATAATCAAGAGTATGAGAGCGCTGCTGCGTTTTGGCCGGATGTTCATGGAC 2142
Query 2381 GAGTCATAGCGGCATTAATAATATCACAGTTGCTTCTGATGGGTCTATTGGGAACAAAGC 2440
| || ||| ||||||| || ||||| |||||||||||||||||| | || || ||||| |
Sbjct 2143 GGGTTATAACGGCATTGATCATATCTCAGTTGCTTCTGATGGGTTTGTTAGGTACAAAAC 2202
Query 2441 ACGCTGCATT-AGCTGCACCTTTTCTCATTGCT-TTGCCTGTGCTTACCATCGGTTTCCA 2498
| || || || |||||| || |||||||||||| || |||||| |||| |||||||||||
Sbjct 2203 ATGCCGC-TTCAGCTGCTCCGTTTCTCATTGCTCTT-CCTGTGATTACTATCGGTTTCCA 2260
Query 2499 CCACTTCTGCAAAGGTCGTTAT-GAGCCAGCCTTCATCAGATACCCTTTACAGGAAGCTA 2557
|| |||||| ||||| |||| | || || ||||| || | ||||| |||||||||||||
Sbjct 2261 CCGCTTCTGTAAAGGCCGTT-TCGAACCTGCCTTTGTCCGTTACCCCTTACAGGAAGCTA 2319
Query 2558 TGATGAAAGATACATTGGAAAGCGCAAGAGAACCAAACCTCAACCTTAAAGGCTACTTGC 2617
|||||||||||||||||||||| |||||||| ||||| || ||||| ||||| |||||||
Sbjct 2320 TGATGAAAGATACATTGGAAAGAGCAAGAGAGCCAAATCTGAACCTGAAAGGTTACTTGC 2379
Query 2618 AAAATGCTTACATTCATCCAGTTTTCAAAGGCGATGA-AGACGATGATGACATTGATGAC 2676
|| | ||||| |||||||| ||||| ||||||| ||| | | ||||| ||| | ||||
Sbjct 2380 AAGACGCTTATATTCATCCGGTTTTTAAAGGCGGTGATA-ATGATGACGACG--G-TGAC 2435
Query 2677 AAGCTCGGGAAGTTTGAGGATGAAGCCATCATTGTTCCCACCAAACGTCAGTCGCGGAGA 2736
| | |||| || || ||| |||||| |||||| || || || ||||| || ||||||||
Sbjct 2436 ATGATCGGAAAATTGGAGAATGAAGTCATCATAGTGCCAACAAAACGCCAATCGCGGAGG 2495
Query 2737 AATACTCCGGCTCCTAGCAGAATCAGTGGGGAAGATTCGCCGTCTTTGCCCTTTAGT--- 2793
|| ||||| || || ||||||||||| || ||| || || |||||| || ||| |
Sbjct 2496 AACACTCCTGCACCGAGCAGAATCAGCGGTGAATCGTCTCCATCTTTGGCCGTTATTAAC 2555
Query 2794 GGTAAACTAGTCTAGTCTAA 2813
|||||| |||||||| |||
Sbjct 2556 GGTAAAGAAGTCTAGTTTAA 2575
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 145132966099
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5