BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492685 Length=621 Score E Sequences producing significant alignments: (Bits) Value AT4G21865.1 | Symbols: | unknown protein; Has 11 Blast hits to... 723 0.0 > AT4G21865.1 | Symbols: | unknown protein; Has 11 Blast hits to 11 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:11601905-11603276 FORWARD LENGTH=783 Length=783 Score = 723 bits (391), Expect = 0.0 Identities = 470/509 (92%), Gaps = 2/509 (0%) Strand=Plus/Plus Query 66 TCGAGATTGGAACCAAAATTATGTACCCGAAAGTGAAAGCTGACAACGAAGCTTGTAGTT 125 |||| ||||||||||||| ||||||||||||||||||| |||||| |||||| |||| | Sbjct 105 TCGAAATTGGAACCAAAACTATGTACCCGAAAGTGAAAATTGACAATGAAGCTGGTAGAT 164 Query 126 ACAAGTAG-AGGAGTTCTTGTCTGAACTCGAACTATCTCCAAACTCGTGTCTCTGAGAAT 184 ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 165 ACAAGCAGAAGG-GTTCTTGTCTGAACTCGAACTATCTCCAAACTCGTGTCTCTGAGAAT 223 Query 185 AATCAAGAAGATGATTTACAAATATATGTGGCTAAGATTCCTAAGATTTACATACCAAGT 244 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 224 AATCAAGAAGATGATTTACAAATATACGTGGCTAAGATTCCTAAGATTTACATACCAAGT 283 Query 245 GTCCTCATGTCTGAAAGTGAATCCAAAGAAATGAATAAGCGTATTAGAGGAGCTGACATT 304 |||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 284 GTCCTCATGTCTCAGAGTGAATCCAAAGAAATGAATAAGCCTATTAGAGGAGCTGACATT 343 Query 305 GAAGTAAAATCAAAAACCAAAGCCAGTCCGATCTTACGCCCACGCGCTGTTGTATCAAGT 364 ||||||||| ||| ||||||||||||||| | | |||| ||||||||||||||||||||| Sbjct 344 GAAGTAAAACCAATAACCAAAGCCAGTCCAACCCTACGTCCACGCGCTGTTGTATCAAGT 403 Query 365 CCCGATAATGATGCAATGATCGGCAACATGAACATGATTGAAGAAAGAAAAGCTAAGAAG 424 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 404 CCCGATAATGATGCGATGATCGGCAACATGAACATGATTGAAGAAAGGAAAGCTAAGAAG 463 Query 425 GGTTTGAAGAGTGATGATCATATCAGGAGCAGAGCTTCTCAGCCTAAGAATATTGATACT 484 |||||||||||| | |||||||| | ||| || |||||||||| ||||||| || |||| Sbjct 464 GGTTTGAAGAGTAAAGATCATATTAAGAGTAGGGCTTCTCAGCTTAAGAATGTTAATACC 523 Query 485 AATGTGAAGATTTCTCATCGTATAGTCGCTAAGCAATCAGGAGTCAATTCAAGGGATCAC 544 |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||| Sbjct 524 AATGTGAAGATTTCTCATCGTATAGTCGCTAAGCTACCGGGAGTCAATTCAAGGGATCAC 583 Query 545 AAATGATCAACTTGTTTATTGATGATGCC 573 ||||||||| ||| | |||| |||||||| Sbjct 584 AAATGATCAGCTTCTCTATTAATGATGCC 612 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29939551612 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5