BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492708
Length=3654
Score E
Sequences producing significant alignments: (Bits) Value
AT4G21670.1 | Symbols: CPL1, FRY2, ATCPL1 | C-terminal domain p... 5334 0.0
AT4G21680.1 | Symbols: NRT1.8 | NITRATE TRANSPORTER 1.8 | chr4:... 60.2 1e-07
> AT4G21670.1 | Symbols: CPL1, FRY2, ATCPL1 | C-terminal domain
phosphatase-like 1 | chr4:11511115-11517396 FORWARD LENGTH=3774
Length=3774
Score = 5334 bits (2888), Expect = 0.0
Identities = 3407/3646 (93%), Gaps = 81/3646 (2%)
Strand=Plus/Plus
Query 1 AGAACGCCACAAAACCTAATAAACTTTTCCCAGATACACAAACAAA---ATCATC-ATCA 56
|||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||
Sbjct 1 AGAACGCCACAAAACCTAATAAACTTTTCCCAGATACACAAACAAACTCATCATCAACCA 60
Query 57 A-G--GAAG-AAG-AACTAGGG--GTTTTTTGTGGATTCATCATCGGTATTTTACAGATC 109
| | |||| ||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 61 AGGAAGAAGAAAGAAACTAGGGTTTTTTTTTGTGGATTCATCATCGGTATTTTACAGATC 120
Query 110 TATATTCAAAGGGAACAAAATC-TAAAGAACAAACACTAAATTCTCATTCTTTCTCTTA- 167
|||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||
Sbjct 121 TATATTCAAAGGGAACAAAATCTTAAGGAACAAACACTAAATTTTCATTCTTTCTCTTAT 180
Query 168 TTA--C------C--AAATCTT-CTTTTGTTTTCTTGATTCTTGCTAAAG-AAAAAACTC 215
||| | | ||||||| ||||||||||| ||||||||||||||| |||||||||
Sbjct 181 TTACCCATTTATCAAAAATCTTCCTTTTGTTTTCCTGATTCTTGCTAAAGAAAAAAACTC 240
Query 216 GGATCCAATTCAAAAACTAGTGTGGACTGGTGATCAATCTATCAAATCAGGCCAAGGGAC 275
|||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 241 GGATCCAATTCATAAACTAGTGTGGACTGGTGATCAATCTATCAATTCTGGCCAAGGGAC 300
Query 276 AAGAAAAAGTTAAGATTTTGATGAACCAA-TTTGAGATGAGACATTAGACATCCATTGAT 334
|| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 301 AACAAAAAGTTTAGATTTTGATGAACCAATTTTGAGATGAGACAATAGACATCCATTGAT 360
Query 335 CTGTAAACTTT----------A--AGAAAAGAAAGTATGTATAGTAATAATAGAGTAGAA 382
||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 361 CTGTAAACTTTAAGAAGGAGAAGGAGAAAAGAAAGTATGTATAGTAATAATAGAGTAGAA 420
Query 383 GTGTTTCATGGAGATGGAAGAATTGGAGAAATGGAGATATACCCTTCAAGGGAATCGCAG 442
||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| | |
Sbjct 421 GTGTTTCATGGTGATGGAAGACTTGGAGAATTGGAGATATACCCTTCAAGGGAATTG-A- 478
Query 443 CAGCAGCAAGAAGATGATGTGATGAAGCAGAGGAAGAAGAAACAGAGGGAAGTAATGGAG 502
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 -ATCAGCAACAAGATGATGTGATGAAGCAGAGGAAGAAGAAACAGAGGGAAGTAATGGAG 537
Query 503 GAAGCCAAGATGGGAATCAGAATAAGCCACTTTTCTCAATCTAGCGAGAGGTGTACTCCT 562
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 538 CTAGCCAAGATGGGAATCAGAATAAGCCACTTTTCTCAATCTGGCGAGAGGTGTCCTCCT 597
Query 563 CTCGCAGTACTTACTACAATTTCATCTTGTGGTCTCTGTTTCAAATTAGAAGCTTCACCT 622
|| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 598 CTTGCAATACTTACTACAATTTCATCTTGTGGCCTTTGTTTCAAATTAGAAGCTTCACCT 657
Query 623 TCTCTC-GCTCAAGAGCCACTCAGTCTT-CTCTACTCGTCTTGTCTCATGGACAACAAGA 680
|||| | ||||| ||| |||||||| || |||||||||| ||||||| |||||||||||
Sbjct 658 TCTC-CAGCTCAGGAGTCACTCAGT-TTATTCTACTCGTCCTGTCTCAGGGACAACAAGA 715
Query 681 CGGCAGTAATGCTCCTGGGTGGAGAAGAGCTCCATTTGGTTGCCATGTACTCGGAAAATA 740
| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 716 CAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTACTCGGAAAATA 775
Query 741 TCAAGAATGACCGTCCTTGTTTCTGGGCATTTAGTGTTGCCCCTGGAGTCTACGATTCCT 800
|||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||
Sbjct 776 TCAAGAATGACCGTCCTTGTTTCTGGGCATTTAGTGTTGCTCCTGGAATTTACGATTCCT 835
Query 801 GTCTTGTCATGTTGCATATTAGATGTCTGGGTATTGTCTTTGATCTCGATGAAACCCTTG 860
||||||| |||||| || |||||||||||||||||||||||||||| |||||||||||||
Sbjct 836 GTCTTGTTATGTTGAATCTTAGATGTCTGGGTATTGTCTTTGATCTTGATGAAACCCTTG 895
Query 861 TAGTGGCGAATACCATGCGCTCATTTGAGGATAAGATTGACGGGTTGCAGCGGAGAATAA 920
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 896 TAGTGGCGAATACCATGCGCTCATTTGAGGATAAGATTGACGGGTTTCAGCGGAGAATAA 955
Query 921 ACAATGAGATGGACCCTCAACGCCTTGCCGTTATGGTGGCTGAGATGAAGCGATATCAAG 980
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 956 ACAACGAGATGGACCCTCAACGCCTTGCCGTTATAGTGGCTGAGATGAAGCGTTATCAAG 1015
Query 981 ATGACAAAAATCTATTGAAGCAATATGTTGAAAGTGACCAGGTTGTTGAAAACGGGGAGG 1040
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1016 ATGACAAAAATCTATTGAAGCAATATATTGAAAGTGACCAGGTTGTTGAAAACGGGGAGG 1075
Query 1041 TGATCAAGGTGCAATCTGAAATTGTTCCTGCCTTGTCTGACAACCATCAGCCTCTTGTTC 1100
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 TGATAAAGGTGCAATCTGAAATTGTTCCTGCCTTGTCTGACAACCATCAGCCTCTTGTTC 1135
Query 1101 GCCCCCTGATAAGGTTGCAAGAGAAGAATATTATCCTGACTCGCATTAACCCGATGATTC 1160
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1136 GCCCTCTGATAAGGTTGCAAGAGAAGAATATTATTCTGACTCGCATTAACCCAATGATTC 1195
Query 1161 GTGATACAAGTGTTCTTGTGAGAATGAGGCCTTCATGGGAGGAACTTCGAAGCTATTTGA 1220
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1196 GTGATACAAGTGTTCTTGTGAGAATGAGGCCCTCATGGGAGGAACTTCGAAGCTATTTGA 1255
Query 1221 CAGCAAAAGGGCGCAAGCGTTTTGAAGTATATGTTTGCACGATGGCTGAAAGAGATTACG 1280
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 CAGCAAAAGGGCGTAAGCGTTTTGAAGTATATGTTTGCACGATGGCTGAAAGAGATTACG 1315
Query 1281 CCTTAGAGATGTGGAGGCTCCTTGATCCAGAAGGGAATTTGATAAACACAAATGACTTGC 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 CCTTAGAGATGTGGAGGCTCCTTGATCCAGAAGGGAATTTGATAAACACAAATGACTTGC 1375
Query 1341 TGGCTCGCATTGTTTGTGTGAAATCTGGTTTaaaaaaaTCACTGTTCAATGTGTTTCTCG 1400
| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1376 TTGCTCGCATCGTTTGTGTGAAATCTGGTTTTAAAAAGTCACTGTTCAATGTGTTTCTCG 1435
Query 1401 ACGGAACCTGCCATCCAAAGATGGCACTGGTAATTGATGATCGACTGAAAGTTTGGGATG 1460
| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1436 ATGGAACCTGCCATCCAAAGATGGCATTGGTAATTGATGATCGATTGAAAGTTTGGGATG 1495
Query 1461 AGAAGGATCAGCCGAGGGTGCATGTGGTTCCTGCATTCGCTCCCTATTATTCTCCTCAAG 1520
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 AGAAGGATCAGCCGAGGGTACATGTGGTTCCTGCATTCGCTCCCTATTATTCTCCTCAAG 1555
Query 1521 CTGAAGCTGCTGCAACACCAGTACTATGTGTTGCCAGAAACGTTGCTTGTGGTGTCAGAG 1580
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1556 CTGAAGCTGCTGCAACACCAGTACTATGTGTTGCCAGGAACGTTGCCTGTGGTGTCAGAG 1615
Query 1581 GTGGATTTTTCAGGGATTTTGATGATAGTCTGCTACCAAGGATTGCTGAAATATCTTATG 1640
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1616 GTGGATTTTTCAGGGATTTTGATGATAGTCTGCTACCAAGGATTGCTGAAATTTCTTATG 1675
Query 1641 AGAATGATGTTGAGGATATTCCTTCTCCACCTGATGTCAGCCATTATTTGGTGTCGGAGG 1700
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1676 AGAATGATGCTGAGGATATTCCTTCTCCGCCTGATGTCAGCCATTATTTGGTGTCGGAGG 1735
Query 1701 ATGATACATCGGGTTTAAACGGGAACAAAGATCCACTTTCCTTTGACGGGATGGCTGATG 1760
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1736 ATGATACATCGGGTTTAAATGGGAACAAAGATCCACTTTCCTTTGACGGGATGGCTGATA 1795
Query 1761 CTGAAGTGGAGAGAAGACTGAAGGAGGCAATTTCTGCATCTTCAGTTGTCCTTCCGGCGG 1820
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1796 CTGAAGTGGAGAGAAGACTGAAGGAGGCAATTTCTGCATCTTCAGCTGTCCTTCCGGCGG 1855
Query 1821 TAAATATAGATCCAAGGATAGCTGCTCCCGTTCAGTACCCCATGGCTTCTACTTCTTCTG 1880
|||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1856 CAAATATAGATCCGAGGATAGCTGCTCCCGTTCAGTTCCCCATGGCTTCTGCTTCTTCTG 1915
Query 1881 TTTCAGTTCCAGTACCAGTACCAGGACCAGTCGTGCAACAAGCACTACAACCATCAGCTA 1940
||||||||||||||||||||| | | ||||||||||||||| ||||||| |||||||
Sbjct 1916 TTTCAGTTCCAGTACCAGTAC-A--A---GTCGTGCAACAAGCAATACAACCTTCAGCTA 1969
Query 1941 TGGCCTTTCCAAGT-TT---T--CAACAACC---------GACATCAATAGCAAAACACT 1985
|||||||||||||| || | |||||||| |||||||||||| |||||||
Sbjct 1970 TGGCCTTTCCAAGTATTCCATTTCAACAACCTCAACAACCGACATCAATAGCTAAACACT 2029
Query 1986 TGATTTCTTCAGAACCAAGCTTGCAGAGTTCTCCTGCTAGAGAGGAAGGTGAGGTACCTG 2045
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2030 TGGTTCCTTCAGAACCAAGCTTGCAGAGTTCTCCTGCTAGAGAGGAAGGTGAGGTACCTG 2089
Query 2046 AATCAGAATTAGATCCAGATACTAGGAGGAGGCTCCTCATATTGCAGCATGGACAAGATA 2105
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2090 AATCAGAATTAGATCCAGATACTAGGAGGAGACTCCTCATATTGCAGCATGGACAAGATA 2149
Query 2106 CTAGGGATCCTGCTCCAAGTGAACCTTCGTTTCCTCAGAGACCTCCAGTTCAAGCTCCAG 2165
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2150 CTAGGGATCCTGCTCCAAGTGAACCTTCATTTCCTCAGAGACCTCCAGTTCAAGCTCCA- 2208
Query 2166 CCC-CACATGTGCAATCAAGAAATGGTTGGTTTCCTGTTGAGGAGGAGATGGATCCAGCT 2224
||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 2209 CCCTCACATGTGCAATCAAGAAATGGCTGGTTTCCTGTTGAGGAGGAGATGGATCCTGCT 2268
Query 2225 CAAATTCGTCGAGCAGTCTCCAAAGAATATCCATTGGATTCTGAAATGATTCATATGGAA 2284
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 2269 CAAATTCGTCGAGCAGTCTCAAAAGAATATCCGTTGGATTCTGAAATGATTCATATGGAA 2328
Query 2285 AAGCACAGGCCTCGTCATCCATCAtttttttCTAAGATCGATAACTCAACTCAGTCTGAC 2344
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2329 AAGCACAGGCCTCGTCATCCATCATTTTTTTCTAAGATTGATAACTCAACTCAGTCTGAC 2388
Query 2345 AGGATGCTTCATGAGAATCGCAGGCAGCCGAAGGAGTCGCTCCGGAGAGATGAACAGTTA 2404
||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct 2389 AGGATGCTTCATGAGAATCGCAGGCCGCCAAAGGAGTCTCTCCGGAGAGATGAACAGTTA 2448
Query 2405 CGGCCAAACAACAATCTACCTGGCTCTCATCCTTTCTATGGGGAGGATGCGTCTTGGAAT 2464
|| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2449 CGTTCAAATAACAATCTACCTGACTCTCATCCTTTCTATGGGGAGGATGCGTCTTGGAAT 2508
Query 2465 CAATCTTCTTCTAGGAACAGTGATCTTGACTTCCTACCTGAACGAAGTGTCTCAGCAACA 2524
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2509 CAATCTTCCTCTAGGAACAGTGATCTTGACTTCCTACCTGAACGAAGTGTCTCAGCAACG 2568
Query 2525 GAGAGTTCAGCTGATGTTCTACATGGAATCGCTATCAAATGTGGAACTAAGGTGGAGTAC 2584
|||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct 2569 GAGACTTCAGCTGATGTTCTACACGGAATTGCTATCAAATGTGGAGCTAAGGTGGAGTAC 2628
Query 2585 AGACCAAGTTTGGTTGCTAGTACAGATTTGCGGTTCTCTGTTGAGGCTTGGCTTTCTAAT 2644
| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2629 AAACCAAGTTTAGTTTCTAGTACAGATTTGCGGTTCTCTGTTGAGGCTTGGCTTTCTAAT 2688
Query 2645 GAAAAAATTGGTGAAGGGATTGGCAAATCGAGACGAGAAGCCCTGCACAAGGCTGCTGAA 2704
|||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 2689 CAAAAAATTGGAGAAGGGATTGGCAAATCGAGAAGAGAAGCCCTGCATAAGGCTGCTGAA 2748
Query 2705 GCTTCTATACAGAACTTAGCTGATGTATATATACATGCAAATGGTGACCCAGGGCCAAGC 2764
|||||||||||||| |||||||||| |||||| | ||||||||||||||||||||| |||
Sbjct 2749 GCTTCTATACAGAATTTAGCTGATGGATATATGCGTGCAAATGGTGACCCAGGGCCCAGC 2808
Query 2765 CACAGAGATGCTAGCCCCTTCACCAATGGAAATATGATTATGGGAAACGCAAGTGCGCTT 2824
||||||||||||| |||||||||||||| |||||| | |||||||||||||| |||||||
Sbjct 2809 CACAGAGATGCTACCCCCTTCACCAATGAAAATATAAGTATGGGAAACGCAAATGCGCTT 2868
Query 2825 GATAATCAGCCATTTGCCAGAGATGAAACAGCGATGCCAGTTTCTTCTAGACCTACAGAC 2884
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 2869 AATAATCAGCCATTTGCTAGAGATGAAACAGCGTTGCCAGTTTCTTCTAGACCTACAGAT 2928
Query 2885 CCGAGATTGGAAGGTTCTATGAGGCACACCGGCTCCATTACTGCGCTCAGGGAATTGTGT 2944
|||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2929 CCGAGATTAGAAGGTTCTATGAGGCACACTGGCTCCATTACTGCACTCAGGGAATTGTGT 2988
Query 2945 GCATCGGAGGGTTTTGAGATGGCCTTTCAATCTCAGCGTCCGCTTCCATCTGACATGGTC 3004
|||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 2989 GCATCGGAGGGTCTTGAGATGGCTTTTCAATCTCAGCGTCAGCTTCCATCTGACATGGTC 3048
Query 3005 CACAGAGATGAATTACGTGCTCAGGTTGAAATAGATGGGCGTGTTGTAGGGGAAGGAGTT 3064
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3049 CACAGAGATGAATTACATGCTCAGGTTGAAATAGATGGGCGTGTTGTAGGGGAAGGAGTT 3108
Query 3065 GGATCGACATGGGACGAAGCTAGAATGCAGGCTGCTGAGAGAGCACTGTGTAGTGTGAGA 3124
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3109 GGATCGACATGGGACGAAGCTAGAATGCAGGCTGCTGAGAGAGCACTGTCCAGTGTGAGA 3168
Query 3125 TCAATGCTTGGTCAACCTGTGCATAAACGACAAGGATCTCCACGATCATTTGCCGGGATG 3184
|||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 3169 TCAATGCTTGGTCAACCTCTGCATAAACGACAAGGATCTCCACGATCATTTGGTGGGATG 3228
Query 3185 TCAAACAAGCGTTTAAAGCCAGACTTTCAACGGTCTCTGCAACGGATGCCATCTTCAGGA 3244
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 3229 TCAAACAAGCGATTAAAGCCGGACTTTCAACGGTCTCTGCAACGGATGCCATCTTCGGGA 3288
Query 3245 AGATACTCTTAAAAATAAAACCATGTGAAGAACAAAGCACATTCTTGATTCTACATCAAT 3304
||||||||||||||||||||||||||||||||| || | || | ||||||||| |||
Sbjct 3289 AGATACTCTTAAAAATAAAACCATGTGAAGAACGAA-C-CA--C---ATTCTACATTAAT 3341
Query 3305 TCCATTCTCTTGGTAAGAACAGCTACCAAGACGAATTCTTTGTCAAGTTCCTTTCTTCAC 3364
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3342 TCCATTCTCTTGGTAAAAACAGCTACCAAGACGAATTCTTTGTCAAGTTCCTTTCTTCGC 3401
Query 3365 CAAACGATGATCAAGACAGAGAGAGTTGGCTCTCTTGTATTGTTGTAACAACAGTT-GAG 3423
|||| |||||||||||||| |||||||| ||||||||||||| |||||||||| || |||
Sbjct 3402 CAAATGATGATCAAGACAGCGAGAGTTGCCTCTCTTGTATTGATGTAACAACAATTTGAG 3461
Query 3424 GCGGATCATGATTTTTGTATCATAAAAACTCAAGAGTTGAAGCAACAGCCCGAGTGATCA 3483
|||| || ||||||||||||||| |||||| ||||||||||| |||| |||||| ||
Sbjct 3462 GCGGTTCGCGATTTTTGTATCATAGAAACTCTTGAGTTGAAGCATCAGCTCGAGTGGCCA 3521
Query 3484 CACAGATAAGACCTAAGCATGAACGATTAGCTTGTTCTCAGGGCTGTTAAGTTTCCATAA 3543
|| |||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||
Sbjct 3522 CAAAGATAAGACCTAAGGATGAACGTTTAGCTTGTTCTCAGG-CTGTTAAGTTTCCACAA 3580
Query 3544 AGCTTTATTCTGCAGTTTT-ACAGTTCACAGTCTCT-GTTTTCACT 3587
|||||| ||||||||||| | |||| |||||| || |||||||||
Sbjct 3581 AGCTTT-TTCTGCAGTTTCCATAGTTAACAGTC-CTTGTTTTCACT 3624
Score = 60.2 bits (32), Expect = 1e-07
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 3623 GTGGAATCAACTTATCCTTTATTGAGAAACAT 3654
||||||||||||||||||||||||||||||||
Sbjct 3741 GTGGAATCAACTTATCCTTTATTGAGAAACAT 3772
> AT4G21680.1 | Symbols: NRT1.8 | NITRATE TRANSPORTER 1.8 | chr4:11517353-11519765
REVERSE LENGTH=2146
Length=2146
Score = 60.2 bits (32), Expect = 1e-07
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Minus
Query 3623 GTGGAATCAACTTATCCTTTATTGAGAAACAT 3654
||||||||||||||||||||||||||||||||
Sbjct 2136 GTGGAATCAACTTATCCTTTATTGAGAAACAT 2105
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 181955502261
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5