BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492718 Length=1007 Score E Sequences producing significant alignments: (Bits) Value AT4G21590.1 | Symbols: ENDO3 | endonuclease 3 | chr4:11480360-1... 1472 0.0 AT4G21600.1 | Symbols: ENDO5 | endonuclease 5 | chr4:11485119-1... 857 0.0 AT4G21585.1 | Symbols: ENDO4 | endonuclease 4 | chr4:11477988-1... 765 0.0 > AT4G21590.1 | Symbols: ENDO3 | endonuclease 3 | chr4:11480360-11482719 FORWARD LENGTH=1194 Length=1194 Score = 1472 bits (797), Expect = 0.0 Identities = 934/998 (94%), Gaps = 17/998 (2%) Strand=Plus/Plus Query 25 ATGTGGATTGTGAGTATACTAGTGCTTACACAGCTCGTTCATGGAGCTCTCTGTTGGGGA 84 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 183 ATGTGGATTGTGAGTATACTCGTGCTTACACAGCTCGTTAATGGAGCTCTCTGTTGGGGA 242 Query 85 GACGATGGTCACTACGCTGTCTGCAAAATAGCTCAGGGTTATTTTGAGGAAGAAACTGTA 144 |||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 243 GACGCTGGTCATTACGCTGTCTGCAAAATAGCTCAGAGTTATTTTGAGGAAGATACTGTA 302 Query 145 GTTGCTGTGAAGAAGCTTCTGCCTGAATCTGCAAATGGTGAGCTAGCAGCTGTTTGTTCA 204 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 303 GTTGCTGTGAAGAAACTTCTGCCTGAATCTGCAAATGGTGAGCTAGCAGCTGTTTGCTCA 362 Query 205 TGGCCTGATGAGATAAAAAAGCTCCCGCAATGGCGATGGACTAGTGCTTTGCATTTTGCT 264 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 TGGCCTGATGAAATCAAAAAGCTCCCGCAATGGCGATGGACTAGTGCTTTGCATTTTGCT 422 Query 265 GATACACCTGATTACAAATGCAACTATGAGTATTCTAGGGACTGTCCTAAAGACTGGTGT 324 ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 423 GATACGCCTGATTACAAATGCAACTATGAGTACTCTCGGGACTGTCCTAAAGACTGGTGT 482 Query 325 GTGACAGGAGCAATCTTCAATTACACAAACCAACTAATGTCTGCTTCTGAAATCTCACAG 384 |||||||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||||| Sbjct 483 GTGACAGGGGCAATCTTCAATTACACTAACCAACTAATGTCTACTTCTGAAAACTCACAG 542 Query 385 AGTATAGTCCGCTACAACTTGACAGAGGCTCTCATGTTCTTATCACATTATATGGGAGAT 444 |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 543 AGTATAGTCCACTATAACTTAACAGAGGCTCTCATGTTCTTATCACATTATATGGGAGAT 602 Query 445 ATCCATCAGCTTTTACATGAAGGTTTTATTGGAGATCTAGGTGGTAACAAAATAAAAGTC 504 |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 603 ATCCATCAGCCTTTACATGAAGGTTTTATTGGAGATCTAGGTGGTAACAAGATAAAAGTT 662 Query 505 CACTGGTACAATCACGAAACTAATTTGCACCGTGTGTGGGATGACATGATAATTGAGTCT 564 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 663 CACTGGTACAATCAGGAAACTAATTTGCACCGTGTGTGGGATGATATGATAATTGAGTCT 722 Query 565 GCTCTAGAAACATACTATAATTCAAGCCTTCCACGCATGATTCAAGCCCTTCAAGCCAAA 624 ||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| Sbjct 723 GCTCTAGAAACATACTACAATTCAAGCCTTCCACGCATGATTCATGAACTTCAAGCCAAA 782 Query 625 CTCAAGAACGGCTGGTCAAATGATGTACCTTCATGGGAGTCATGTCAACTTAACCAAACG 684 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 783 CTCAAGAACGGCTGGTCAAACGATGTACCTTCATGGGAGTCATGTCAACTTAACCAAACG 842 Query 685 GCCTGCCCAAATCCATATGCTTCTGAAAGCATTGATCTTGCCTGCAAGTATGCTTACAGG 744 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 843 GCCTGCCCAAATCCGTATGCTTCTGAAAGCATTGATCTTGCCTGCAAGTATGCTTACAGG 902 Query 745 AATGCCACCGCAGGGACTACTTTAGGAGATTACTATTTTGTCTCTCGGTTACCCGTTGTA 804 || ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct 903 AACGCCACCGCAGGGACTACTTTAGGAGATTACTATTTCGTCTCTCGGTTACCGGTGGTA 962 Query 805 GAGAAGAGACTTGCACAAGGCGGGATTCGCTTGGC-GGCGACTCTTAACCGAATCTATTC 863 ||||||||||||||||||||||| ||||||||||| || ||||||||||||||| | ||| Sbjct 963 GAGAAGAGACTTGCACAAGGCGGAATTCGCTTGGCAGG-GACTCTTAACCGAATATTTTC 1021 Query 864 TACAAAATCAAAA-CTTGCTAGAGCATGAATAAAGATCCA--A-A-TCACTTGAACATCC 918 | ||||| | || |||||||||||||||| ||||||||| | | |||||||||||||| Sbjct 1022 TGCAAAA-CGGAAGCTTGCTAGAGCATGAAAAAAGATCCAGGAGAATCACTTGAACATCC 1080 Query 919 AAGAACACTCTTTTGTA--A-T---GTGTAATGGTAGT--T-AAGGTTATGGTTTGCTAT 969 | |||||||||| |||| | | ||||||||||||| | |||||||||||||| ||| Sbjct 1081 ATGAACACTCTTATGTATTAATAATGTGTAATGGTAGTAGTTAAGGTTATGGTTTGGTAT 1140 Query 970 TGTTCCTGAGTTTTAACTATAATAAGTATGAAACCAAA 1007 |||||||| ||||||||||||||||||||||||| ||| Sbjct 1141 TGTTCCTGCGTTTTAACTATAATAAGTATGAAACGAAA 1178 > AT4G21600.1 | Symbols: ENDO5 | endonuclease 5 | chr4:11485119-11487416 FORWARD LENGTH=1148 Length=1148 Score = 857 bits (464), Expect = 0.0 Identities = 741/871 (85%), Gaps = 34/871 (4%) Strand=Plus/Plus Query 26 TGTGGATTGTGAGTATACTAGTGCTTACACAGCTCGTTCATGGAGCTCTCTGTT-GGGGA 84 |||||||||||||| |||| ||||||||||| || || |||||||||||||||| ||||| Sbjct 84 TGTGGATTGTGAGTGTACTCGTGCTTACACACCTTGTCCATGGAGCTCTCTGTTGGGGGA 143 Query 85 GACGATGGTCACTACGCTGTCTGCAAAATAGCTCAGGG-TTATTTTGAGGAAGAAACTGT 143 | |||||||||||| |||| |||||| ||||| |||| || |||||||| || ||| | Sbjct 144 -AGGATGGTCACTACACTGTTTGCAAATTAGCTGAGGGATT-CTTTGAGGATGATACTAT 201 Query 144 AGTTGCTGTGAAGAAGCTTCTGCCTGAATCTGCAAATGGT-G-AG-CTAGCAGCTGTTTG 200 | ||| |||||||| |||||||||||||| | ||||| | | ||||||| | |||| Sbjct 202 TGCTGCAGTGAAGAAACTTCTGCCTGAATCAGTTGATGGTGGTGGACTAGCAGATTTTTG 261 Query 201 TTCATGGCCTGATGAGA-TAAAAAAGCTCCCGCAATGGCGATGGACTAGTGCTTTGCATT 259 |||||||||||||| | ||||||| ||| ||||||||| ||||||||| ||||||| | Sbjct 262 CTCATGGCCTGATGAAATTAAAAAA-CTCTCGCAATGGCAATGGACTAGCACTTTGCACT 320 Query 260 TTGCTGATACACCTGATTACAAATGCAACTATGAGTATT-CTAGGGACTG---T----C- 310 || | | |||||||| |||| |||||||| ||||||| | ||||||| | | Sbjct 321 ATGTTAACACACCTGAATACAGGTGCAACTACGAGTATTGC-CGGGACTGCCATGACACT 379 Query 311 C-T----A-AA-GACTGGTGTGTGACAGGAGCAATCTTCAATTACACAAACCAACTAATG 363 | | | || |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 380 CATAAGCATAAGGACTGGTGTGTGACAGGAGCGATCTTCAATTACACAAACCAGTTAATG 439 Query 364 TCTGCTTCTGAAATCTCACAGAGTATAGTCCGCTACAACTTGACAGAGGCTCTCATGTTC 423 ||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||| Sbjct 440 TCTGCTTCTGAAAACTCACAGAATATAGTCCACTACAACTTGACAGAGGCTCTCTTGTTC 499 Query 424 TTATCACATTATATGGGAGATATCCATCAGCTTTTACATGA-AGGTTTTATTGGAGATCT 482 || |||||||||||||||||| | ||||||| || ||| | |||||| |||||||||| Sbjct 500 TTGTCACATTATATGGGAGATGTTCATCAGCCCTTGCAT-ACTGGTTTTCTTGGAGATCT 558 Query 483 AGGTGGTAACAAAATAAAAGTCCACTGGTACAATCACGAAA-CTAATTTGCACCGTGTGT 541 ||||||||||| ||||| |||| |||||||| || || ||| | |||||||||| ||| | Sbjct 559 AGGTGGTAACACAATAATAGTCAACTGGTACCATAAC-AAATCAAATTTGCACCATGTCT 617 Query 542 GGGATGACATGATAATTGAGTCTGCTCTAGAAACATACTATAATTCAAGCCTTCCACGCA 601 |||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| || Sbjct 618 GGGACAACATGATAATTGACTCTGCTCTAGAAACATACTACAATTCAAGCCTTCCACACA 677 Query 602 TGATTCAAGCCCTTCAAGCCAAACTCAAGAACGGCTGGTCAAATGATGTACCTTCATGGG 661 |||||||||| ||||||||||||||||||||||||||||| |||||||| || || ||| Sbjct 678 TGATTCAAGCTCTTCAAGCCAAACTCAAGAACGGCTGGTCGAATGATGTTCCGTCGTGGA 737 Query 662 AGTCATGTCAAC-TTAACCAAACGGCCTGCCCAAATCCATATGCTTCTGAAAGCATTGAT 720 ||||||||| || || |||||| |||||| ||||||| ||||||||||||||||||||| Sbjct 738 AGTCATGTC-ACTTTCACCAAAAGGCCTGTCCAAATCTGTATGCTTCTGAAAGCATTGAT 796 Query 721 CTTGCCTGCAAGTATGCTTACAGGAATGCCAC-CGCAGGGACTACTTTAGGAGATTACTA 779 || ||||||||||||||||||||||| || || | | |||||||||||||||||| | || Sbjct 797 CTCGCCTGCAAGTATGCTTACAGGAACGCTACTC-CGGGGACTACTTTAGGAGATGAGTA 855 Query 780 TTTTGTCTCTCGGTTACCCGTTGTAGAGAAGAGACTTGCACAAGGCGGGATTCGCTTGGC 839 ||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 856 TTTCCTTTCTCGGTTACCCGTTGTAGAGAAGAGACTTGCACAAGGTGGGATTCGCTTGGC 915 Query 840 GGCGACTCTTAACCGAATCTATTCTACAAAA 870 || |||||||| || |||| |||| ||||| Sbjct 916 AGCTACTCTTAATCGTATCTTTTCTGCAAAA 946 > AT4G21585.1 | Symbols: ENDO4 | endonuclease 4 | chr4:11477988-11479953 FORWARD LENGTH=900 Length=900 Score = 765 bits (414), Expect = 0.0 Identities = 723/871 (83%), Gaps = 25/871 (3%) Strand=Plus/Plus Query 41 TACTAGTGCTTACACAGCTCGTTC-ATGGAGCTCTCTGTTGGGGAGACGATGGTCACTAC 99 |||| ||||||||||||||| || |||||||||| ||||||||| | || ||||||||| Sbjct 35 TACTCGTGCTTACACAGCTC-ATCAATGGAGCTCTGTGTTGGGGAAAAGAAGGTCACTAC 93 Query 100 GCTGTCTGCAAAATAGCTC-AGGGTTATTTTGAGGAAGAAACTGTAGTTGCTGTGAAGAA 158 | |||||||||||||| | || | || ||||||||||||||||||| ||| |||||||| Sbjct 94 ACAGTCTGCAAAATAGC-CGAGAGCTACTTTGAGGAAGAAACTGTAGCTGCGGTGAAGAA 152 Query 159 GCTTCTGCCTGAATCTGCAAATGGTGAGCTAGCAGCTGTTTGTTCATGGCCTGATGAGAT 218 ||||| ||| |||| || |||| || |||||| ||||||| ||||||||||||||||| Sbjct 153 ACTTCTACCTAAATCAGCTGATGGAGATCTAGCATCTGTTTGCTCATGGCCTGATGAGAT 212 Query 219 AAAAAAGC-TCCCGCAATGGCGATGGACTAGTGCTTTGCATTTTGCTGATACACCTGATT 277 || | | | |||||||||||||||||| ||||||| | || ||| |||||||||| Sbjct 213 TAAGCACCAT-TGGCAATGGCGATGGACTAGCCCTTTGCACTATGTTGACACACCTGATT 271 Query 278 ACAAATGCAACTATGAGTATTCTAGGGA----C-TG-T-C-C-T----A--AAGACTGGT 322 ||| ||||||||| ||||||| | |||| | || | | | | | ||||| ||| Sbjct 272 ACAGATGCAACTACGAGTATTGTCGGGATTGCCATGATACTCATAAGAATCAAGACCGGT 331 Query 323 GTGTGACAGGAGCAATCTTCAATTACACAAACCAACTAATGTCTGCTTCTGAAATCTCAC 382 ||||||||||||| || ||||||||||| | ||||| ||||| |||||||||| ||| Sbjct 332 GTGTGACAGGAGCTATTTTCAATTACACTATGCAACTTATGTCCGCTTCTGAAAACTCGG 391 Query 383 AGAGTATAGTCCGCTACAACTTGACAGAGGCTCTCATGTTCTTATCACATTATATGGGAG 442 | | |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 392 ATACTATAGTCCACTACAACTTGACAGAGGCTCTCATGTTCTTATCACATTTTATTGGAG 451 Query 443 ATATCCATCAGCTTTTACATGAAGGTTTTATTGGAGATCTAGGTGGTAACAAAATAAAAG 502 |||| || |||| || |||| |||||| | |||||| |||||| |||| |||| || Sbjct 452 ATATTCACCAGCCCTTGCATGTTGGTTTTCTGGGAGATGAAGGTGGAAACACGATAACAG 511 Query 503 TCCACTGGTACAATCACGAAACTAATTTGCACCGTGTGTGGGATGACATGATAATTGAGT 562 ||| ||||||| || | |||| ||||| |||| ||| |||||| ||||||||||||||| Sbjct 512 TCCGCTGGTACCGTCGCAAAACAAATTTACACCATGTCTGGGATAACATGATAATTGAGT 571 Query 563 CTGCTCT-AGAAACATACTATAATTCAAGCCTTCCACGCATGATTCAAGCCCTTCAAGCC 621 ||||||| | |||||||||| ||| ||| ||||||| ||||||| |||| ||||||||| Sbjct 572 CTGCTCTTA-AAACATACTACAATAAAAGTCTTCCACTCATGATTGAAGCACTTCAAGCC 630 Query 622 AAACTCAAGAACGGCTGGTCAAATGATGTACC-TTCATGGGAGTCATGTCAACTTAACCA 680 || || | ||||| ||||||||||||||| || || ||||||||||||||||||||||| Sbjct 631 AATCTTACGAACGACTGGTCAAATGATGTTCCATTG-TGGGAGTCATGTCAACTTAACCA 689 Query 681 AACGGCCTGCCCAAATCCATATGCTTCTGAAAGCATTGATCTTGCCTGCAAGTATGCTTA 740 ||||||||| |||||||| || || ||||||||||| |||| ||||||||||||||||| Sbjct 690 AACGGCCTGTCCAAATCCGTACGCATCTGAAAGCATAAATCTAGCCTGCAAGTATGCTTA 749 Query 741 CAGGAATGCCACCGCAGGGACTACTTTAGGAGATTACTATTTTGTCTCTCGGTTACCCGT 800 ||||| || ||| |||||||||||||||||||| ||||||| |||||||||||||| | Sbjct 750 TAGGAACGCTACCCCAGGGACTACTTTAGGAGATGACTATTTCCTCTCTCGGTTACCCAT 809 Query 801 TGTAGAGAAGAGACTTGCACAAGGCGGGATTCGCTTGGCGGCGACTCTTAACCGAATCTA 860 ||| |||||||||||||| ||||| ||||| |||||||| || ||||||||||| |||| Sbjct 810 TGTGGAGAAGAGACTTGCGCAAGGTGGGATACGCTTGGCAGCCACTCTTAACCGTATCTT 869 Query 861 TTCTACAAAATCAAAACTTGCTAGAGCATGA 891 |||| ||||| | || | |||| || ||||| Sbjct 870 TTCTTCAAAACCTAAGCATGCTGGATCATGA 900 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49329932354 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5