BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492722 Length=1209 Score E Sequences producing significant alignments: (Bits) Value AT4G21570.1 | Symbols: | Protein of unknown function (DUF300) ... 1781 0.0 > AT4G21570.1 | Symbols: | Protein of unknown function (DUF300) | chr4:11470883-11472981 REVERSE LENGTH=1380 Length=1380 Score = 1781 bits (964), Expect = 0.0 Identities = 1083/1140 (95%), Gaps = 9/1140 (1%) Strand=Plus/Plus Query 1 ACAAATCCGTGTGGGCGAATCAGAGTCTCACATGTAGACCAATGCCGAC-T-TGGTTATG 58 ||||| |||||||| |||||||||| |||||||| |||||||||||| | | ||||| Sbjct 3 ACAAAACCGTGTGGACGAATCAGAGAGACACATGTATACCAATGCCGACTTCTTTTTATG 62 Query 59 CAATCGTAGCGTCTCACTCACGTGGTAAACGCGTCGCCAtttttttAATATGACCACGTT 118 ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 63 CAATCGTAGCGTCTCTCTCACGTGGTAAACGCGTCGCCATTTTTATAATACGACCACGTT 122 Query 119 TGTGACTCCATTAATGGCGGTCTCGTGCTCCCTCAATTCTTCATGA--T--CTACTAAGA 174 |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct 123 TGTGACTCCATTAATGGCGGTCTCATGCTCCCTCAATTCTTCATGATCTAACTACTAAGA 182 Query 175 GATCTGATTCAC-TTCTTCACACTCTCTCTTAGTCTCATCTTCGCTTCTTCCCTAGCTCT 233 |||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 183 GATCTGATTCACTTTCTTCACACTCTC-C-GAGTCTCATCTTCGCTTCTTCCCTAGCTCT 240 Query 234 TATGTGGAAACAATGATGGACCTAACGAAACTGAAACCTCCGCAGATCACTTTTTATTGC 293 ||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 241 TATCTGGACACAATGATGGACCTAACGAAACTGAAGCCTCCACAGATCACTTTTTATTGC 300 Query 294 TCGGCGTTTTCCGTCTTGCTCACAGTTCATTTCACGATACAGCTTGTGTCGCAGCATCTC 353 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 301 TCGGCGTTTTCCGTCTTGCTCACACTTCATTTCACGATACAGCTTGTATCGCAGCATCTC 360 Query 354 TTTCACTGGAAGAACCCTAAGGAACAGAAGGCTATTCTCGTTATTGTTCTTATGGCTCCT 413 || ||||||||||||||||||||||| |||||||| ||| | ||||| |||||||||||| Sbjct 361 TTCCACTGGAAGAACCCTAAGGAACAAAAGGCTATACTCATCATTGTGCTTATGGCTCCT 420 Query 414 ATCTACGCCGTTGTTTCCTTTATTGGTTTGTTAGAAGTCAAAGGAAGTGAAACCTTCTTC 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 ATCTACGCCGTTGTTTCCTTTATTGGTTTGTTAGAAGTCAAAGGAAGTGAAACCTTCTTC 480 Query 474 TTGTTTCTTGAATCCATCAAGGAATGCTATGAAGCTCTCGTCATTGCCAAATTCTTGGCA 533 | ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct 481 CTCTTTCTTGAATCCATCAAAGAATGCTACGAAGCTCTTGTCATTGCCAAATTCTTGGCA 540 Query 534 TTGATGTATAGTTATTTAAACATATCTATGAGCAAAAACATTTTGCCTGATGGAATCAAA 593 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTGATGTATAGTTATCTAAACATATCTATGAGCAAAAACATTTTGCCTGATGGAATCAAA 600 Query 594 GGAAGAGAGATTCACCATTCTTTCCCAATGACTCTTTTCCAGCCTCATGTAGTCCGTTTG 653 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 601 GGAAGAGAGATTCACCATTCTTTCCCAATGACTCTTTTTCAGCCTCATGTAGTCCGTTTG 660 Query 654 GATCATCACACTCTTAAACTTTTGAAATACTGGACATGGCAATTTGTGGTCATTCGACCA 713 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 GATCGTCACACTCTTAAACTTTTGAAATACTGGACATGGCAATTTGTGGTCATTCGACCC 720 Query 714 GTGTGCTCCACTTTGATGATAGCTTTACAACTCATTGGGTTTTATCCTTCTTGGTTGAGC 773 ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct 721 GTGTGCTCCACTTTGATGATAGCTTTACAGCTCATCGGGTTTTATCCTTCATGGTTGAGC 780 Query 774 TGGACATTCACTATCATTGTCAATTTCTCGGTTTCTCTGGCGTTGTATTCTCTTGTGATA 833 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 781 TGGACATTCACTATCATTGTCAATTTCTCGGTTTCTCTGGCCTTGTATTCTCTTGTGATA 840 Query 834 TTCTACCATGTGTTTGCTAAGGAGCTTGCTCCTCATAATCCACTCGCAAAGTTCCTCTGC 893 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TTCTACCATGTGTTTGCTAAGGAGCTTGCTCCTCATAATCCACTCGCAAAGTTCCTCTGC 900 Query 894 ATCAAAGGAATTGTCTTCTTTGTCTTTTGGCAGGGAATAGCACTAGACATTCTGGTGGCA 953 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 901 ATCAAAGGAATTGTCTTCTTTGTCTTTTGGCAGGGAATAGCACTAGACATACTGGTGGCA 960 Query 954 ATGGGATTCATCAAATCTCACCATTTCTGGCTGGAGGTAGAGCAAATCCAAGAAGCAATT 1013 ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 961 ATGGGATTCATAAAATCTCACCATTTCTGGTTGGAGGTAGAACAAATCCAAGAAGCAATT 1020 Query 1014 CAGAATGTGTTGGTATGTCTTGAGATGGTTATCTTCGCTGTGGTTCAGAAGCATGCTTAT 1073 |||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| Sbjct 1021 CAGAATGTGTTGGTATGTCTTGAGATGGTTATCTTCGCTGCGGTTCAGAAACACGCTTAT 1080 Query 1074 AATGCTGGTCCTTATAGCGGTGAGACCAAGAAGAAACTCGATAAAAAGACAGAATGATTT 1133 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1081 CATGCTGGTCCTTATAGCGGCGAGACCAAGAAGAAACTCGATAAAAAGACCGAATGATTT 1140 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59387244735 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5