BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492730
Length=3897
Score E
Sequences producing significant alignments: (Bits) Value
AT4G21540.1 | Symbols: SPHK1 | sphingosine kinase 1 | chr4:1145... 2438 0.0
AT4G21534.1 | Symbols: | Diacylglycerol kinase family protein ... 2150 0.0
AT4G21530.1 | Symbols: | Transducin/WD40 repeat-like superfami... 845 0.0
> AT4G21540.1 | Symbols: SPHK1 | sphingosine kinase 1 | chr4:11459553-11462606
FORWARD LENGTH=1764
Length=1764
Score = 2438 bits (1320), Expect = 0.0
Identities = 1457/1525 (96%), Gaps = 1/1525 (0%)
Strand=Plus/Plus
Query 2373 CTCTCATCAACGACGGAACTCCTCTTCCTCCCTCTTGCCTATGGATCGTCAGCCGGAGAG 2432
|||||| |||||||| ||||| ||| ||||| ||||| ||||||||||||||||||||||
Sbjct 18 CTCTCACCAACGACGAAACTCGTCTCCCTCCATCTTG-CTATGGATCGTCAGCCGGAGAG 76
Query 2433 GGAGAATGATGAACTACCGTCTCCGGCGATAATTTCCGACCGTGTTCTGGTAAATGGTGT 2492
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 77 GGAGAATGATGAACTACCATCTCCGGCGATAATTTCCGACCGAGTTCTGGTAAATGGTGT 136
Query 2493 TGTCACGCCGTTAACTTTGACCGCCGACGGAGAGCTACGATCGACGGAATCTGGACGCCG 2552
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 137 TGTCACGCCGTTAACGTTGACCGCCGAGGGAGAGCTACGATCGACGGAATCTGGACGGCG 196
Query 2553 GAAATCGACGGTGGCGAAAGAAATCCTGAGTTTCGTCGTTGAAGGTAACAAGGTTAGAGT 2612
|||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 197 GAAATCGACGTTGGCAAAAGAAATCCTGAGTTTCGTCGTGGAAGGTAACAAGGTTAGAGT 256
Query 2613 AAAGACTTTGGTGGAGAGACGAGGAGGAATTTGCTGTGGAGGAAGTGGTGGAGATTATAC 2672
|||||| ||||| |||| | ||||||||||||||||| ||||||||| |||||||||| |
Sbjct 257 AAAGACCTTGGTTGAGAAAGGAGGAGGAATTTGCTGTAGAGGAAGTGCTGGAGATTATGC 316
Query 2673 GAGGAACGATTTCGTTTTCGAGCCTCTCTCTGATGAATCTAGGAAGCTATGGTCCGATAA 2732
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 317 GAGGAACGATTTCGTTTTCGAGCCTCTCTCTGATGAATCTAGAAAGCTTTGGTCCGATAA 376
Query 2733 GCTCAATCAACATCTCGACTCTCTCGGTCGGCCAAAGAAATTGCTTGTGTTTGTGAACCC 2792
| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 377 GTTCCATCAACACCTCGTCTCTCTCGGTCGGCCAAAGAAATTGCTTGTGTTTGTGAATCC 436
Query 2793 CTTTGGCGGGAAGAAATCAGCGAGAAAGATTTTTCAAGAGGAAGTGAAGCCATTATTTGA 2852
||||||||||||||| ||||||||||||| |||||||||||||| |||||||| |||||
Sbjct 437 GTTTGGCGGGAAGAAAACAGCGAGAAAGATATTTCAAGAGGAAGTAAAGCCATTGTTTGA 496
Query 2853 AGATGCTAATATTCAAATTGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAAGGAGAT 2912
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 497 AGATGCAAATATTCAACTTGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAAGGAAAT 556
Query 2913 TGTTAGGTCTATGGATGTATCAAAATACGATGGTATTGTTTGTGTTAGCGGCGACGGCAT 2972
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 557 TGTTAGGTCCATGGATGTATCAAAATACGATGGTATTGTTTGTGTTAGCGGTGACGGTAT 616
Query 2973 CCTTGTTGAGGTTGTAAATGGACTGCTTGAAAGAGCAGACTGGAAAACTGCCTTAAAATT 3032
||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||
Sbjct 617 CCTTGTTGAGGTTGTAAATGGACTGCTTGAAAGAGAAGACTGGAAGACTGCCATAAAATT 676
Query 3033 GCCGATCGGAATGGTCCCTGCAGGAAGTGGTAATGGCATGATTAAATCATTGTTGGAACC 3092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 GCCGATCGGAATGGTCCCTGCAGGAAGTGGTAATGGCATGATTAAATCATTGTTGGAACC 736
Query 3093 GGTAGGGCTTCCTTGTAGTGCAACAAGTGCTACTATTTCGATTATCCGAGGTCGTACACG 3152
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 737 GGTAGGGCTTCCTTGTAGTGCAACAAGTGCTACTATTTCGATAATCCGAGGTCGTACACG 796
Query 3153 TTCTCTAGATGTAGCAACTATCTCACAAGGGACTACCAAATTCTTCAGTGTCTTGATGCT 3212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 TTCTCTAGATGTAGCAACTATCTCACAAGGGACTACCAAATTCTTCAGTGTCTTGATGCT 856
Query 3213 TGCTTGGGGTTTAGTGGCTGATATAGACATCGAGTCAGAGAAGTTCAGATGGATGGGTAG 3272
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 857 TGCTTGGGGTTTAGTGGCTGATATAGACATCGAGTCAGAGAAATTCAGATGGATGGGTAG 916
Query 3273 TGCTCGATTTGATATCTATGGTCTTCAGAGGATAATATGCTTAAGACAATACAATGGACG 3332
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 917 TGCTCGCTTTGATATCTATGGTCTTCAGAGGATAATATGCTTAAGACAATACCATGGACG 976
Query 3333 AATTCTATTTGTGCCAGCTCCTGGGTTTGAAAGCTATGGGCAACGAGCCAGTTGCAGTGT 3392
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 977 AATTCTATTTGTGCCAGCTCCTGGGTTCGAAAGCTATGGGCAACGAGCCAGTTGCAGTAT 1036
Query 3393 AGATAAAGAGTCATCTGGTAGTGATAAGGCACTCATATACCAAGGACCTGATACTAAACT 3452
|||||||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||
Sbjct 1037 AGATAAAGAGCCATCTGGTAGTGATAAGACACTCGTATACCAAGGACCTGATAGTAAACT 1096
Query 3453 CGAAGATCTGGATTGGAGAGAAATGAAAGGCCCATTTGTTTCAGTATGGCTTCATAATGT 3512
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1097 TGAAAATCTGGATTGGAGAGAAATGAAAGGCCCATTTGTTTCAGTATGGCTTCATAATGT 1156
Query 3513 TCCCTGGGGTGCTGAGAACACTTTGGCTGCTCCTGACGCAAAGTTTTCTGATGGCTTCCT 3572
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1157 TCCCTGGGGTGCTGAGAACACTTTGGCTGCTCCTGACGCTAAGTTTTCTGATGGCTTCCT 1216
Query 3573 GGATTTGATTGTCATGAAAGACTGTCCTAAACTTGCCTTGCTATCACTTATGACAAAGTT 3632
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1217 GGATTTGATTGTCATGAAAGACTGTCCTAAACTAGCCTTGCTATCACTTATGACAAAGTT 1276
Query 3633 GAGTGATGGAACACATGTTCAGTCACCATATGTATCCTATCTGAAGGTGAAGGCATTCGT 3692
|||||||||||| ||||| || |||||||||| ||| |||||||||||||||||||||||
Sbjct 1277 GAGTGATGGAACCCATGTCCAATCACCATATGCATCATATCTGAAGGTGAAGGCATTCGT 1336
Query 3693 ACTGGAGCCAGGTGCACGCATAGACGAACCAGACAAGGAAGGAATCATAGATTCAGATGG 3752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 ACTGGAGCCAGGTGCACGCATAGACGAACCAGACAAGGAAGGAATCATAGATTCAGATGG 1396
Query 3753 AGAGGTTTTGGCAAGAGGAAGAGGATCATACAAATGCGATCAAAAGGCTTTGATGTCTTA 3812
||| |||||||||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct 1397 AGAAGTTTTGGCAAGAGGAAGAAAATCGTACAAATGTGATCAAAAGGCTTTGATGTCTTA 1456
Query 3813 TGACAAGCTTCAAATAAGTGTTGATCAAGGTTTAGCCACTCTCTTCTCTCCTGAATAATT 3872
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1457 CGACAAGCTTCAAATAAGTGTTGATCAAGGTTTAGCCACTCTCTTCTCTCCTGAATAATT 1516
Query 3873 CTGATTGATACATGAGATGTGATGA 3897
|||| ||||||||||||||||||||
Sbjct 1517 CTGACTGATACATGAGATGTGATGA 1541
Score = 1227 bits (664), Expect = 0.0
Identities = 1102/1303 (85%), Gaps = 72/1303 (6%)
Strand=Plus/Plus
Query 1031 GTTTCGTTGTCGAAGGTAAGC--GGATTAGAGTAAAGGTCGTGGTTGAGAAA-GAGGCAG 1087
||||||| || |||||||| | || ||||||||||| | ||||||||||| |||| ||
Sbjct 226 GTTTCGTCGTGGAAGGTAA-CAAGG-TTAGAGTAAAGACCTTGGTTGAGAAAGGAGG-AG 282
Query 1088 GAATCTGCTGTGGA-CAATTTGATGGAGATT-TCGTGAGGAAAGATTTCGTCTTT-GAG- 1143
|||| |||||| || || || |||||||| | | |||||| |||||||| ||| |||
Sbjct 283 GAATTTGCTGTAGAGGAA-GTGCTGGAGATTAT-GCGAGGAACGATTTCGT-TTTCGAGC 339
Query 1144 C-CTCTC--ATCG-ATC-A-AAATG-GATGGTGCTTTAAGCTT-CGTCAATACCTTGAT- 1194
| ||||| || | ||| | ||| | |||| | |||| || | |||| |||| | |
Sbjct 340 CTCTCTCTGAT-GAATCTAGAAA-GCTTTGGTCCGATAAG-TTCCATCAACACCTCG-TC 395
Query 1195 TCTCTTGGTCGGCCAAAGAGATTACTTGTATTTGTGAACCCGTTTGGCGGGAAGAAATTG 1254
||||| ||||||||||||| ||| ||||| |||||||| ||||||||||||||||||
Sbjct 396 TCTCTCGGTCGGCCAAAGAAATTGCTTGTGTTTGTGAATCCGTTTGGCGGGAAGAAAACA 455
Query 1255 GCGAGAGAGATTTTTGTTA-AGGAAGTGAAGCCGTTGTTTGAAGATGCTGATGTTCAACT 1313
|||||| |||| ||| | ||||||| ||||| |||||||||||||| || |||||||
Sbjct 456 GCGAGAAAGATATTT-CAAGAGGAAGTAAAGCCATTGTTTGAAGATGCAAATATTCAACT 514
Query 1314 TGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAAGGAAATTGTTAAGTCCATGGATGT 1373
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 515 TGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAAGGAAATTGTTAGGTCCATGGATGT 574
Query 1374 ATCAAAATATGATGGTATTGTTTGTGTCAGCGGCGATGGTATCCTTGTTGAGGTTGTAAA 1433
||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 575 ATCAAAATACGATGGTATTGTTTGTGTTAGCGGTGACGGTATCCTTGTTGAGGTTGTAAA 634
Query 1434 TGGACTGCTCGAAAGAGCAGACTGGA-GAACTGCCTTAAAATTGCCGATCGGAATGGTCC 1492
||||||||| ||||||| |||||||| || ||||| ||||||||||||||||||||||||
Sbjct 635 TGGACTGCTTGAAAGAGAAGACTGGAAGA-CTGCCATAAAATTGCCGATCGGAATGGTCC 693
Query 1493 CTGCAGGAACTGGTAATGGCATGAT-AAAGTCATTGTTGGACAC-GGTTGGGCTTCGATG 1550
||||||||| ||||||||||||||| ||| ||||||||||| || ||| ||||||| ||
Sbjct 694 CTGCAGGAAGTGGTAATGGCATGATTAAA-TCATTGTTGGA-ACCGGTAGGGCTTCCTTG 751
Query 1551 CT-GTGCAA-ATAGTGCTACTATTTCTATTATCCGAGGTCATAAACGTTTTGTAGATGTT 1608
| |||||| | |||||||||||||| || |||||||||| || ||||| | |||||||
Sbjct 752 -TAGTGCAACA-AGTGCTACTATTTCGATAATCCGAGGTCGTACACGTTCTCTAGATGTA 809
Query 1609 GCAACTAT-TGCACAAGGGAATACCAAATTCTTCAGTGTGTTGATGCTTGCTTGGGGTTT 1667
|||||||| | ||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 810 GCAACTATCT-CACAAGGGACTACCAAATTCTTCAGTGTCTTGATGCTTGCTTGGGGTTT 868
Query 1668 AATAGCTGATATAGACATCGAGTCAGAGAGGTTCAGATGGATGGGAAGTGCTCGCATTGA 1727
| | ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||
Sbjct 869 AGTGGCTGATATAGACATCGAGTCAGAGAAATTCAGATGGATGGGTAGTGCTCGCTTTGA 928
Query 1728 CTTCTATGTACTTGTTAAATTGCTGGCTCTTCAGAGGATAATATGTTTAAGACAATACAA 1787
| || || | | | | |||||||||||||||||| |||||||||||| |
Sbjct 929 -T---AT---CT----A--T-G--G--TCTTCAGAGGATAATATGCTTAAGACAATACCA 970
Query 1788 TGGACGAATTTTATTTCTACCGGCTCCTGGGTTTGAAAGCTACGGACAGCCAGCCAGTTG 1847
|||||||||| ||||| | || ||||||||||| |||||||| || || | |||||||||
Sbjct 971 TGGACGAATTCTATTTGTGCCAGCTCCTGGGTTCGAAAGCTATGGGCAACGAGCCAGTTG 1030
Query 1848 CAGTCTATACAAAGAGCCACCTGTTAGCGATAA-AGAGCTCGGGTACCAAGGACCTGAAA 1906
|||| || | ||||||||| ||| ||| ||||| | | |||| |||||||||||||| |
Sbjct 1031 CAGTATAGATAAAGAGCCATCTGGTAGTGATAAGACA-CTCGTATACCAAGGACCTGATA 1089
Query 1907 CTAAATTTGAAGATCTAGAATGGAGAGAAATCAAAGGTCCATTTGTTACTGTATGGCTTC 1966
|||| ||||| |||| || ||||||||||| ||||| ||||||||| | ||||||||||
Sbjct 1090 GTAAACTTGAAAATCTGGATTGGAGAGAAATGAAAGGCCCATTTGTTTCAGTATGGCTTC 1149
Query 1967 ACAATGTTCCCTGGGGTGCTGAGAACACTTTGACTGCTCCTG-CTGCAAAGTTTTCTGAT 2025
| |||||||||||||||||||||||||||||| ||||||||| | || ||||||||||||
Sbjct 1150 ATAATGTTCCCTGGGGTGCTGAGAACACTTTGGCTGCTCCTGAC-GCTAAGTTTTCTGAT 1208
Query 2026 GGCTTTCTGGACTTGATTGT-ATTGAAAAACTGCCCTAAGCTTGTCCT-GCTCTCACTTA 2083
||||| ||||| |||||||| || |||| |||| ||||| || | ||| ||| |||||||
Sbjct 1209 GGCTTCCTGGATTTGATTGTCAT-GAAAGACTGTCCTAAACTAG-CCTTGCTATCACTTA 1266
Query 2084 TGAGACAGACGAGT-AGTGGAACACATGTT-AAGTCACCCTATATAACGTATCTAAAGGT 2141
||| | || |||| | |||||| ||||| || ||||| ||| | | ||||| |||||
Sbjct 1267 TGACAAAGTTGAGTGA-TGGAACCCATGTCCAA-TCACCATATGCATCATATCTGAAGGT 1324
Query 2142 GAAGGCATTTGTGCTAGAGCCGGGTGCACTTATAGACGAACCAGACAAGGAAGGAATCAT 2201
||||||||| || || ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1325 GAAGGCATTCGTACTGGAGCCAGGTGCACGCATAGACGAACCAGACAAGGAAGGAATCAT 1384
Query 2202 AGATTCAGATGGAGAGGTTTTGGCAAGAGGAA-AAAGAGCATATAACTGTGATCAAAAGG 2260
||||||||||||||| |||||||||||||||| ||| | | || || |||||||||||||
Sbjct 1385 AGATTCAGATGGAGAAGTTTTGGCAAGAGGAAGAAA-ATCGTACAAATGTGATCAAAAGG 1443
Query 2261 CTTTGATGTCTTACGACAAGCTTCAAGTAACTGTTGATCAAGG 2303
|||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1444 CTTTGATGTCTTACGACAAGCTTCAAATAAGTGTTGATCAAGG 1486
> AT4G21534.1 | Symbols: | Diacylglycerol kinase family protein
| chr4:11456230-11458820 FORWARD LENGTH=1446
Length=1446
Score = 2150 bits (1164), Expect = 0.0
Identities = 1348/1434 (94%), Gaps = 23/1434 (2%)
Strand=Plus/Plus
Query 874 ATGGAGAATGATCAAATGATATCTCCGACTGATATAATCACCGGCATAGTGTTCATTGAT 933
||||||||||||||| | || | |||||||||||||||||||||||||||||| ||||||
Sbjct 1 ATGGAGAATGATCAATTCATGTGTCCGACTGATATAATCACCGGCATAGTGTTTATTGAT 60
Query 934 GGTGAATTGGCTATGTTGACTTTGACTGCCGACGGGGAGCTACGGTGGACAGAGTACGGA 993
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 61 GGTGAATTGGCTATGTTGACTTTGACTGCCGACGGGGAGTTACGGTGGACAGAGTATGGA 120
Query 994 CTCCGGCAACAGTTGTCGATGAAGAAGGATGTTCTTGGTTTCGTTGTCGAAGGTAAGCGG 1053
|||||||| | |||||||||||||||||||||||||||||| | ||||||||||||| |
Sbjct 121 CTCCGGCAGTATTTGTCGATGAAGAAGGATGTTCTTGGTTTCATCGTCGAAGGTAAGCAG 180
Query 1054 ATTAGAGTAAAGGTCGTGGTTGAGAAAGAGGC---AGGAATCTGCTGTGGACAATTTGAT 1110
||||||||||| | |||||||||||||||||| |||||||||||| |||||||||| |
Sbjct 181 ATTAGAGTAAAAGCCGTGGTTGAGAAAGAGGCAGGAGGAATCTGCTGCGGACAATTTGGT 240
Query 1111 GGAGATTTCGTGAGGAAAGATTTCGTCTTTGAGCCTCTCATCGATCAAAATGGATGGTGC 1170
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GGAGACTTCGTGAGGAAAGATTTCGTCTTTGAGCCTCTCATCGATCAAAATGGATGGTGC 300
Query 1171 TTTAAGCTTCGTCAATACCTTGATTCTCTTGGTCGGCCAAAGAGATTACTTGTATTTGTG 1230
| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct 301 TATAAGCTTCGTCAATACCTTGATTCTCTCGGTCGGCCAAAGAGATTGCTTGTGTTTGTG 360
Query 1231 AACCCGTTTGGCGGGAAGAAATTGGCGAGAGAGATTTTTGTTAAGGAAGTGAAGCCGTTG 1290
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 361 AACCCGTTTGGCGGGAAGAAATCGGCGAGAGAGATTTTTGTTAAGGAAGTGAAGCCTTTG 420
Query 1291 TTTGAAGATGCTGATGTTCAACTTGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAAG 1350
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 421 TTTGAAGATGCTGATGTTCAACTTGAGATTCAAGAAACTAAGTATCAGTTGCATGCAAAG 480
Query 1351 GAAATTGTTAAGTCCATGGATGTATCAAAATATGATGGTATTGTTTGTGTCAGCGGCGAT 1410
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 481 GAATTTGTTAAGTCCATGGATGTGTCAAAATATGATGGTATTGTTTGTGTCAGCGGCGAC 540
Query 1411 GGTATCCTTGTTGAGGTTGTAAATGGACTGCTCGAAAGAGCAGACTGGAGAACTGCCTTA 1470
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 541 GGTATCCTTGTTGAGGTTGTAAATGGACTGCTCGAAAGAGCAGACTGGAGAAATGCCTTA 600
Query 1471 AAATTGCCGATCGGAATGGTCCCTGCAGGAACTGGTAATGGCATGATAAAGTCATTGTTG 1530
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 AAATTGCCTATTGGAATGGTCCCTGCAGGAACTGGTAATGGCATGATAAAGTCATTGTTG 660
Query 1531 GACACGGTTGGGCTTCGATGCTGTGCAAATAGTGCTACTATTTCTATTATCCGAGGTCAT 1590
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 661 GACACAGTTGGGCTTCGATGCTGTGCAAATAGTGCTACCATTTCTATTATCCGAGGTCAT 720
Query 1591 AAACGTTTTGTAGATGTTGCAACTATTGCACAAGGGAATACCAAATTCTTCAGTGTGTTG 1650
||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct 721 AAACGTTCTGTAGATGTTGCTACAATTGCACAAGGGAATACCAAATTCTTCAGTGTCTTG 780
Query 1651 ATGCTTGCTTGGGGTTTAATAGCTGATATAGACATCGAGTCAGAGAGGTTCAGATGGATG 1710
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 781 ATGCTTGCTTGGGGTTTAATAGCTGATATAGACATCGAGTCAGAGAAGTTCAGATGGATG 840
Query 1711 GGAAGTGCTCGCATTGACTTCTATGTACTTGTTAAATTGCTGGCTCTTCAGAGGATAATA 1770
||||||||||| | | || | |||| ||| | ||| || | ||||||||||||
Sbjct 841 GGAAGTGCTCG--T--A-TT----G-ACTT-TTA--T-GCT--CT-T-CAGAGGATAATA 882
Query 1771 TGTTTAAGACAATACAATGGACGAATTTTATTTCTACCGGCTCCTGGGTTTGAAAGCTAC 1830
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 883 TGTTTAAGACGATACAATGGACGAATTTTATTTCTACCGGCTCCTGGGTTTGAAGGCTAT 942
Query 1831 GGACAGCCAGCCAGTTGCAGTCTATACAAAGAGCCACCTGTTAGCGATAAAGAGCTCGGG 1890
||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||
Sbjct 943 GGACAGCCAGCCAGTTGCAGTCTATACCAAGAGCCACATGTTAGTGATAAAGAGGTCGGG 1002
Query 1891 TACCAAGGACCTGAAACTAAATTTGAAGATCTAGAATGGAGAGAAATCAAAGGTCCATTT 1950
||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct 1003 TACCAAGGACCTGAAACTAAATTTGAAGATCTAGAATGGAGGGAAATGAAAGGCCCATTT 1062
Query 1951 GTTACTG-TATGGCTTCACAATGTTCCCTGGGGTGCTGAGAACACTTTGACTGCTCCTGC 2009
||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1063 GTTAC-GATATGGCTTCACAATGTTCCCTGGGGTTCTGAGAACACTTTGACTGCTCCTGC 1121
Query 2010 TGCAAAGTTTTCTGATGGCTTTCTGGACTTGATTGTATTGAAAAACTGCCCTAAGCTTGT 2069
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1122 TGCAAAGTTTTCTGATGGCTACCTGGACTTGATTGTCTTGAAAAACTGCCCTAAGCTTGT 1181
Query 2070 CCTGCTCTCACTTATGAGACAGACGAGTAGTGGAACACATGTTAAGTCACCCTATATAAC 2129
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 1182 CCTGCTCTCACTTATGAGACAGACGAGTAGTGGAACACATGTTGAGTCACCATATATAGT 1241
Query 2130 GTATCTAAAGGTGAAGGCATTTGTGCTAGAGCCGGGTGCACTTATAGACGAACCAGACAA 2189
|||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 1242 GTATATAAAGGTGAAGGCATTTGTGCTGGAGCCGGGTGCACTTGTAGACGAACCAGACAA 1301
Query 2190 GGAAGGAATCATAGATTCAGATGGAGAGGTTTTGGCAAGAGGAAAAAGAGCATATAACTG 2249
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1302 GGAAGGAATCATAGATTCAGATGGAGAGGTTTTGGCAAGAGGAAAAAGAACATATAAATG 1361
Query 2250 TGATCAAAAGGCTTTGATGTCTTACGACAAGCTTCAAGTAACTGTTGATCAAGG 2303
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1362 TGATCAAAAGGCCTTGATGTCTTACGACAAGCTTCAAGTAACAGTTGATCAAGG 1415
Score = 1358 bits (735), Expect = 0.0
Identities = 1188/1399 (85%), Gaps = 62/1399 (4%)
Strand=Plus/Plus
Query 2502 GTTAACTTTGACCGCCGACGGAGAGCTACGATCGACGGAATCTGGACGCCGG-A--AATC 2558
||| |||||||| |||||||| ||| |||| | ||| || | ||||| |||| | | |
Sbjct 75 GTTGACTTTGACTGCCGACGGGGAGTTACGGTGGACAGAGTATGGACTCCGGCAGTATTT 134
Query 2559 GACGGTGGCGAAAGA-AATCCTGAGTTTCGTCGTTGAAGGTAA-CAAGGTTAGAGT-AAA 2615
| || || ||| || || || ||||| |||| |||||||| | || ||||||| |||
Sbjct 135 GTCGATGAAGAAGGATGTTCTTG-GTTTCATCGTCGAAGGTAAGC-AGATTAGAGTAAAA 192
Query 2616 GACTTTGG-TG-GAGAGACG-AGGAGGAATTTGCTGTGGAGGAA-GTGGTGGAGA-TTAT 2670
| | ||| || || ||| | ||||||||| ||||| ||| || ||||||||| ||
Sbjct 193 G-CCGTGGTTGAGAAAGAGGCAGGAGGAATCTGCTGCGGA-CAATTTGGTGGAGACTT-C 249
Query 2671 ACGAGGAACGATTTCGT-TTTCGAGCCTCTC-TCTGATGAATCTAGGAAGCTATGGTCCG 2728
|||||| |||||||| ||| ||||||||| || ||| || | | | ||||| |
Sbjct 250 GTGAGGAAAGATTTCGTCTTT-GAGCCTCTCATC-GATCAA---A--ATG-GATGGTGCT 301
Query 2729 ATAAGC-TCAATCAACATCTCGACTCTCTCGGTCGGCCAAAGAAATTGCTTGTGTTTGTG 2787
|||||| || |||| | || || ||||||||||||||||||| ||||||||||||||||
Sbjct 302 ATAAGCTTC-GTCAATACCTTGATTCTCTCGGTCGGCCAAAGAGATTGCTTGTGTTTGTG 360
Query 2788 AACCCCTTTGGCGGGAAGAAATCAGCGAGAAAGATTTTT-CAAGAGGAAGTGAAGCCATT 2846
||||| ||||||||||||||||| |||||| |||||||| | ||||||||||||| ||
Sbjct 361 AACCCGTTTGGCGGGAAGAAATCGGCGAGAGAGATTTTTGTTA-AGGAAGTGAAGCCTTT 419
Query 2847 ATTTGAAGATGCTAATATTCAAATTGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAA 2906
|||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||
Sbjct 420 GTTTGAAGATGCTGATGTTCAACTTGAGATTCAAGAAACTAAGTATCAGTTGCATGCAAA 479
Query 2907 GGAGA-TTGTTAGGTCTATGGATGTATCAAAATACGATGGTATTGTTTGTGTTAGCGGCG 2965
||| | |||||| ||| |||||||| |||||||| ||||||||||||||||| |||||||
Sbjct 480 GGA-ATTTGTTAAGTCCATGGATGTGTCAAAATATGATGGTATTGTTTGTGTCAGCGGCG 538
Query 2966 ACGGCATCCTTGTTGAGGTTGTAAATGGACTGCTTGAAAGAGCAGACTGGA-AAACTGCC 3024
|||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||
Sbjct 539 ACGGTATCCTTGTTGAGGTTGTAAATGGACTGCTCGAAAGAGCAGACTGGAGAAA-TGCC 597
Query 3025 TTAAAATTGCCGATCGGAATGGTCCCTGCAGGAAGTGGTAATGGCATGATTAAA-TCATT 3083
||||||||||| || ||||||||||||||||||| |||||||||||||| |||| |||||
Sbjct 598 TTAAAATTGCCTATTGGAATGGTCCCTGCAGGAACTGGTAATGGCATGA-TAAAGTCATT 656
Query 3084 GTTGGAAC-CGGTAGGGCTTCCTTG-TAGTGCAACA-AGTGCTACTATTTCGATTATCCG 3140
||||| || | || ||||||| || | |||||| | |||||||| ||||| ||||||||
Sbjct 657 GTTGG-ACACAGTTGGGCTTCGATGCT-GTGCAA-ATAGTGCTACCATTTCTATTATCCG 713
Query 3141 AGGTCGTACACGTTCTCTAGATGTAGCAACTATCT-CACAAGGGACTACCAAATTCTTCA 3199
||||| || ||||||| ||||||| || || || | ||||||||| ||||||||||||||
Sbjct 714 AGGTCATAAACGTTCTGTAGATGTTGCTACAAT-TGCACAAGGGAATACCAAATTCTTCA 772
Query 3200 GTGTCTTGATGCTTGCTTGGGGTTTAGTGGCTGATATAGACATCGAGTCAGAGAAGTTCA 3259
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 773 GTGTCTTGATGCTTGCTTGGGGTTTAATAGCTGATATAGACATCGAGTCAGAGAAGTTCA 832
Query 3260 GATGGATGGGTAGTGCTCGAT-TTGA-TATCTATGGTCTTCAGAGGATAATATGCTTAAG 3317
|||||||||| |||||||| | |||| | | |||| |||||||||||||||||| |||||
Sbjct 833 GATGGATGGGAAGTGCTCG-TATTGACT-TTTATGCTCTTCAGAGGATAATATGTTTAAG 890
Query 3318 ACAATACAATGGACGAATTCTATTTGTGCCAGCTCCTGGGTTTGAAAGCTATGGGCAACG 3377
|| |||||||||||||||| ||||| | || ||||||||||||||| ||||||| || |
Sbjct 891 ACGATACAATGGACGAATTTTATTTCTACCGGCTCCTGGGTTTGAAGGCTATGGACAGCC 950
Query 3378 AGCCAGTTGCAGTGTAGATAAAGAGTCATC-TGGTAGTGATAAGGCA-CTCATATACCAA 3435
||||||||||||| || | ||||| || | || ||||||||| | | || ||||||
Sbjct 951 AGCCAGTTGCAGTCTATACCAAGAGCCA-CATGTTAGTGATAAAG-AGGTCGGGTACCAA 1008
Query 3436 GGACCTGATACTAAACTCGAAGATCTGGATTGGAGAGAAATGAAAGGCCCATTTGTTTCA 3495
|||||||| |||||| | |||||||| || ||||| ||||||||||||||||||||| |
Sbjct 1009 GGACCTGAAACTAAATTTGAAGATCTAGAATGGAGGGAAATGAAAGGCCCATTTGTTAC- 1067
Query 3496 G-TATGGCTTCATAATGTTCCCTGGGGTGCTGAGAACACTTTGGCTGCTCCTGAC-GCAA 3553
| |||||||||| ||||||||||||||| |||||||||||||| ||||||||| | ||||
Sbjct 1068 GATATGGCTTCACAATGTTCCCTGGGGTTCTGAGAACACTTTGACTGCTCCTG-CTGCAA 1126
Query 3554 AGTTTTCTGATGGCTTCCTGGATTTGATTGTCATGAAAGACTGTCCTAAACTTG-CCTTG 3612
||||||||||||||| |||||| ||||||||| ||||| |||| ||||| |||| || ||
Sbjct 1127 AGTTTTCTGATGGCTACCTGGACTTGATTGTCTTGAAAAACTGCCCTAAGCTTGTCC-TG 1185
Query 3613 CTATCACTTATGACAAAGTTGAGTGA-TGGAACACATGTTCAGTCACCATATGTA-TCCT 3670
|| |||||||||| | || |||| | ||||||||||||| ||||||||||| || | |
Sbjct 1186 CTCTCACTTATGAGACAGACGAGT-AGTGGAACACATGTTGAGTCACCATATATAGT-GT 1243
Query 3671 ATCTGAAGGTGAAGGCATTCGTACTGGAGCCAGGTGCACGCATAGACGAACCAGACAAGG 3730
|| | |||||||||||||| || |||||||| ||||||| ||||||||||||||||||
Sbjct 1244 ATATAAAGGTGAAGGCATTTGTGCTGGAGCCGGGTGCACTTGTAGACGAACCAGACAAGG 1303
Query 3731 AAGGAATCATAGATTCAGATGGAGAGGTTTTGGCAAGAGGAAGAGGATCATACAAATGCG 3790
|||||||||||||||||||||||||||||||||||||||||| | || |||| ||||| |
Sbjct 1304 AAGGAATCATAGATTCAGATGGAGAGGTTTTGGCAAGAGGAAAAAGAACATATAAATGTG 1363
Query 3791 ATCAAAAGGCTTTGATGTCTTATGACAAGCTTCAAATAAGTGTTGATCAAGGTTTAGCCA 3850
|||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||||
Sbjct 1364 ATCAAAAGGCCTTGATGTCTTACGACAAGCTTCAAGTAACAGTTGATCAAGGTTTAGCCA 1423
Query 3851 CTCTCTTCTCTCCTGAATA 3869
| |||||||||||||||||
Sbjct 1424 CACTCTTCTCTCCTGAATA 1442
> AT4G21530.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:11450556-11456007 FORWARD LENGTH=2666
Length=2666
Score = 845 bits (457), Expect = 0.0
Identities = 490/506 (97%), Gaps = 2/506 (0%)
Strand=Plus/Plus
Query 1 ATGGCTCTTCAAATGCCCTTTACAACAATATCAAGAAAGATATCATGTATGAAGTTGTTG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1838 ATGGCTTTTCAAATGCCCTTTACAACAATATCAAGAAAGATATCATGTATGAAGTTGTTG 1897
Query 61 CCGCTTTGCCCTCTTCAGTTGTCAACAACGCAAACACCTACAACAATTCCCATGTCTCTT 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1898 CCTCTTTGCCCTCTTCAGTTGTCAACAACGCAAACACCTACAACAATTCCCATGTCTCTT 1957
Query 121 TCCTTCTATAAGAATGAACTCTCTGATGATACACCTTGTCAAAGTGGGTACACTGATTAC 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1958 TCCTTCTATAAGAATGAACTTTCTGATGATACACCTTGTCAAAGTGGGTACACTGATTAC 2017
Query 181 ATATCTTTTCAAGTCCCCGATGAAACCTTCCCAGAGATTCCGAACTGTGTTGGCATAGCT 240
||||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||
Sbjct 2018 ATATCTTTTCAAGTCCCCGATGAGACCTTCCCAGAGATTTCAAACTGTATTGGCATAGCT 2077
Query 241 AAGGGTTTTAAGCAGAACGCCAACAATGAGAAAAATGGTTATACTTCTCTGGAAGCCGTT 300
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2078 AAGGGTTATAAGCAGAATTCCAACAATGAGAAAAATGGTTATACTTCTCTGGAAGCCGTT 2137
Query 301 TTGTTATCTGTACCTAATGGCTACACTTGTGTCGATTTGTCTCTCTACAAGGATAAAGAA 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2138 TTGTTATCTGTACCTAATGGCTACACTTGTGTTGATTTGTCTCTCTACAAGGATAAAGAA 2197
Query 361 CTGGTTTTATTATTGAATAAGACAAGTGCAGATTCCGAAGGCTCGGGAGAAGCATGCATG 420
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 2198 CTGGTTTTATTATTGAATAAGACAAATACAGATTCCGAAGGCTCGGGAGAAGCATGCATG 2257
Query 421 ATGGTTGTACAAACTGGTGACCTTC-CATTCATTTCCATTTCAAGATCTAGTTCTCTAAA 479
||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||
Sbjct 2258 ATGGTTGTACAAACTGGTGACCT-CGCATTCATTTCCATTTCAGGATCTAGTTCTCTAAA 2316
Query 480 CCAGTGGGAGCTAGAGGATTTGAAGG 505
||||||||||||||||||||||||||
Sbjct 2317 CCAGTGGGAGCTAGAGGATTTGAAGG 2342
Score = 300 bits (162), Expect = 8e-80
Identities = 173/178 (97%), Gaps = 1/178 (1%)
Strand=Plus/Plus
Query 535 GGCTCGATTGTTAACCTGGAAATGGAGAATGAAAAGGTTCGCAAAGTTCCACATTCTGTC 594
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2342 GGCTCGATTGTGAACCTGGAAATGGAGAATGAAAAGGTTCGCAAAGTACCACATTCTGTC 2401
Query 595 ATTGCTCCTCTAGCAGTAAGCGCTTCAAGAGGAGTGGCTTGTGTTTTTGCTGAAAGAAGA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2402 ATTGCTCCTCTAGCAGTAAGCGCTTCAAGAGGAGTGGCTTGTGTTTTTGCTGAAAGAAGA 2461
Query 655 CGAGCTCTGGTGTACATATTGGAAGAAGATGAAGACGAAGAAATCTCTGATGACAAAG 712
|||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 2462 CGAGCTTTGGTGTACATATTGGAAGAAGATGAAGATGAAGAAATCTCTGATGA-AAAG 2518
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 194146069410
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5