BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492743
Length=2182
Score E
Sequences producing significant alignments: (Bits) Value
AT4G21410.1 | Symbols: CRK29 | cysteine-rich RLK (RECEPTOR-like... 3557 0.0
AT4G21400.1 | Symbols: CRK28 | cysteine-rich RLK (RECEPTOR-like... 1351 0.0
> AT4G21410.1 | Symbols: CRK29 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 29 | chr4:11402314-11405056 REVERSE LENGTH=2220
Length=2220
Score = 3557 bits (1926), Expect = 0.0
Identities = 2102/2187 (96%), Gaps = 11/2187 (1%)
Strand=Plus/Plus
Query 1 AAAGCTTCAAGCTTTCATGGAACATGTCAGAGTTATCTTCTTCTTCTTTGCTTGTTTCCT 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 16 AAAGCTTCAAGCTTTCATGGAACATGTCAGAGTTA---TCTTCTTCTTTGCTTGTTTCCT 72
Query 61 AACGCTTGTTCCATTTCATGCCTTTGCTCAGGTAGATTCCTATGAGTTTGATCCAGATTT 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 AACGCTTGCTCCATTTCATGCCTTTGCTCAGGTAGATTCCTATGAGTTTGATCCAGATTT 132
Query 121 CAACTGTGTTGATCGTGGCAACTTCACGGCGAACAGCACTTTTGCCGGGAATCTCAACCG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133 CAACTGTGTTGATCGTGGCAACTTCACGGCGAACAGCACTTTTGCCGGGAATCTCAACCG 192
Query 181 ACTTGTCTCCTCTCTCTCCTCACTCAAATCCAAAGCTTATGGCTTCTACAACCTCTCTTC 240
||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 193 CCTTGTCTCCTCCCTCTCCTCACTCAAATCCCAAGCTTATGGCTTCTACAACCTCTCTTC 252
Query 241 TGGAGACTCATCTGGAGAAAGAGCTTATGCAATTGGTTTGTGTAGAAGAGAAGTCAAAAG 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 253 TGGAGACTCATCTGGAGAAAGAGCTTATGCAATTGGTCTGTGTAGAAGAGAAGTCAAAAG 312
Query 301 AGATGATTGTCTCAGCTGTATTCAGACAGCTGCAAGAAACCTCACCGAGCAGTGTTCACG 360
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||| | |
Sbjct 313 AGATGATTGTGTCAGCTGTATTCAGACAGCTGCAAGAAACCTCACCAAGCAGTGTCCGCT 372
Query 361 GTCAAAGCAAGCTGTTGTGTGGTACACACACTGCATGTTTCGTTATTCGAACAGGACAAT 420
| |||| ||||||||||| |||||||| ||||| ||||||||||| || |||||||||||
Sbjct 373 GACAAAACAAGCTGTTGTATGGTACACGCACTGTATGTTTCGTTACTCAAACAGGACAAT 432
Query 421 CTATGGAAGAAAAGAAACGAATCCGACTAAGGCTTTTATTGCCGGTGAAGAGATATCAGC 480
||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 433 CTACGGAAGAAAAGAAACGAACCCGACTAAGGCTTTTATTGCTGGTGAAGAGATATCAGC 492
Query 481 AAACAGAGATGACTTTGAGCGTCTGCAGAGAGGACTATTGGACAGACTCAAAGGAATTGC 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 493 AAACAGAGATGACTTTGAGCGTCTGCAGAGAGGACTATTGGACAGACTCAAAGGAATTGC 552
Query 541 GGCGGCTGGTGGGCCGAATAGGAAATACGCTCAAGGGAATGGTTCAGCTTCGGCGGGGTA 600
||| ||||||||||| |||||||||||||||||||| || |||||||||||||| |||||
Sbjct 553 GGCTGCTGGTGGGCCTAATAGGAAATACGCTCAAGGAAACGGTTCAGCTTCGGCTGGGTA 612
Query 601 CCGGAGATTCTATGGAACTGTCCAATGTACGCCGGATTTATCTGAACAGGATTGTAATGA 660
||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct 613 CCGGAGATTCTATGGAACTGTGCAATGTACGCCAGATTTGTCTGAACAGGATTGTAATGA 672
Query 661 TTGTCTAGTTTTTGGGTTTGAGAATATCCCAAGTTGTTGTGATGCTGAGATTGGTCTTCG 720
|||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 673 TTGTTTAGTTTTTGGGTTTGAGAATATTCCGAGTTGTTGTGATGCTGAGATTGGTCTTCG 732
Query 721 GTGGTTTTCTCCTAGTTGTAACTTCCGGTTTGAGACGTGGCGATTCTATGAGTTTGATGC 780
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 733 GTGGTTTTCTCCTAGTTGTAACTTCCGGTTTGAGACGTGGAGATTCTACGAGTTTGATGC 792
Query 781 CGACCTAGAGCCAGATCCACCTGCAATTCAGCCTGCTGATTCACCACCATCAGCTGCAAG 840
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 793 CGACCTAGAGCCAGATCCACCTGCAATTCAGCCTGCTGATTCACCACAATCAGCTGCAAG 852
Query 841 AACTGAGAGGACAGGAAAGGGCAAAGGTGGATCTAAAGTCATTATCGCGATAGTCATCCC 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 AACTGAGAGGACAGGAAAGGGCAAAGGTGGATCTAAAGTCATTATCGCGATAGTCATCCC 912
Query 901 GATAGTTCTTGTTGCGTTACTCACAATTTGCCTATGCTTGGTCTTGAAGTGGAGGAAGAA 960
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 913 GATACTTCTTGTTGCGTTACTCGCAATTTGCCTATGCTTGGTCTTGAAGTGGAGGAAGAA 972
Query 961 CAAGTCTGGAGATAGAAACAAAGTTCTTGGGAAATCACCTTTGTCGGGATCAATTGCCGA 1020
|||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 973 CAAGTCTGGATATAAAAACAAAGTTCTTGGGAAATCACCTTTGTCGGGTTCAATTGCCGA 1032
Query 1021 GGATGAGTTCTCGAACACAGAATCACTCTTAGTTCATTTTGAAACTCTAAAGACAGCAAC 1080
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1033 GGATGAGTTCTCGAACACAGAATCACTCTTAGTTCATTTTGAGACTCTAAAGACAGCAAC 1092
Query 1081 AGATAACTTTTCTTCAGAAAACGAACTTGGACGTGGTGGGTTTGGTTCAGTTTATAAGGG 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093 AGATAACTTTTCTTCAGAAAACGAACTTGGACGTGGTGGGTTTGGTTCAGTTTATAAGGG 1152
Query 1141 TGTATTCCCTCACGGGCAAGAAATCGCGGTAAAGAGATTATCGGGTAATTCTGGACAAGG 1200
||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1153 TGTGTTCCCTCAGGGGCAAGAAATCGCGGTGAAGAGATTATCGGGTAATTCTGGACAAGG 1212
Query 1201 AGACAACGAGTTCAAGAACGAAATATTACTACTTGCGAAGCTTCAACATAGGAACCTGGT 1260
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 1213 AGACAACGAGTTCAAGAACGAAATATTACTACTTGCAAAGCTTCAACATAGGAACTTGGT 1272
Query 1261 TAGGCTTATAGGTTTCTGCATACAAGGACAAGAAAGAATCCTTGTCTATGAGTTCATCAA 1320
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1273 CAGGCTTATAGGTTTCTGCATACAAGGAGAAGAAAGACTCCTTGTCTATGAGTTCATCAA 1332
Query 1321 GAATGCTAGTCTTGACCAGTTTATCTTCGATACTGAGAAGCGTCAACTTTTGGATTGGGT 1380
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAACGCTAGTCTTGACCAATTTATCTTCGATACTGAGAAGCGTCAACTTTTGGATTGGGT 1392
Query 1381 GGTGCGATACAAAATGATCGGAGGAATTGCTAGAGGACTTCTTTATCTTCATGAAGACTC 1440
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1393 AGTGCGGTACAAAATGATCGGAGGAATTGCTAGAGGACTCCTTTATCTTCATGAAGACTC 1452
Query 1441 TCGTTTCCGGATAATTCACCGTGATCTTAAAGCTAGCAACATTCTTTTGGACCAAGAAAT 1500
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1453 TCGTTTCCGGATAATTCATCGTGATCTTAAAGCTAGCAACATTCTTTTGGACCAAGAAAT 1512
Query 1501 GAATCTGAAAATCGCAGATTTTGGATTAGCTAAACTCTTTGACACAGGCCAAACCATGAC 1560
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1513 GAATCCGAAAATCGCAGATTTTGGATTAGCTAAACTCTTTGACTCAGGCCAAACCATGAC 1572
Query 1561 ACATCGATTCACAAGCAGGATTGCAGGAACTTACGGATATATGGCTCCGGAATACGCAAT 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1573 ACATCGATTCACAAGCAGGATTGCAGGAACTTACGGATATATGGCTCCGGAATACGCAAT 1632
Query 1621 GCATGGACAATTCTCTGTGAAAACAGATGTTTTCAGCTTGGGTGTATTAGTCATTGAGAT 1680
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1633 GCATGGACAATTCTCTGTGAAAACAGATGTTTTCAGCTTCGGTGTATTAGTCATTGAGAT 1692
Query 1681 CATTACAGGTAAAAGAAACAACAATGGTGGGTCTAATGGTGATGAAGATGCAGAAGATCT 1740
|||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||
Sbjct 1693 CATTACAGGTAAAAGAAACAACAATGGTGGATCGAATGGTGACGAAGATGCAGAAGATCT 1752
Query 1741 TCTTAGTTGGGTGTGGAGAAGCTGGAGAGAAGACACTATACTAAGCGTGATCGATCCGAG 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1753 TCTTAGTTGGGTGTGGAGAAGCTGGAGAGAAGACACTATACTAAGCGTGATCGATCCGAG 1812
Query 1801 TTTAACCGCAGGATCAAGAAACGAGATCTTGAGATGCATACACATTGGTCTTTTATGTGT 1860
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1813 TTTAACCGCAGGATCAAGAAATGAGATCTTGAGATGCATACACATTGGTCTTTTATGTGT 1872
Query 1861 TCAAGAAAGTGCAGCGACTAGACCAACAATGGCAACGGTTTCTCTCATGCTCAATAGCTA 1920
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1873 GCAAGAAAGTGCAGCGACTAGACCAACAATGGCTACGGTTTCTCTCATGCTCAATAGCTA 1932
Query 1921 TTCTTTTACTCTCCCGACGCCTTCGAGGCCTGCGTTTGTGTTAGAGAGTGT-G--ATACC 1977
||||||||| ||||||||||||| |||||||||||||||||| |||||||| | |||||
Sbjct 1933 TTCTTTTACCCTCCCGACGCCTTTGAGGCCTGCGTTTGTGTTGGAGAGTGTCGTCATACC 1992
Query 1978 TTCGAATGTTTCTTCTTCAACGGATGGGTTACAAATGTCGTCGAATGATGTCACTGTTTC 2037
||| |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct 1993 TTCAAATGTTTCTTCTTCAACGGAAGGGTTACAAATGTCGTCAAATGATGTTACTGTTTC 2052
Query 2038 TGAGTTTTCTCCTCGATAATCTGTAAATGTTTTTGATTCTTCTCTGAAAGCCTTTGAAAT 2097
||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 2053 TGAGTTTTCTCCTCGTTAATCTGTAAATGTTTT-GATTCTTCTCTGAAAACCTTTGAAAT 2111
Query 2098 GGGTTTTGTTTGTGTGAATTTTTCAGGCAGCCTGGCTTGATCTTGTTGTGAATAAACACA 2157
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2112 GGGTTTTGTTTGTGTGA-TTTTTCAGGCAGCCTGGCTTGATCTTGTTGTGAATAAA-ACA 2169
Query 2158 --AATCTGAAGCTGTGAGATACGTTTT 2182
||| |||||||||||||||| ||||
Sbjct 2170 TGAATGTGAAGCTGTGAGATACTTTTT 2196
> AT4G21400.1 | Symbols: CRK28 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 28 | chr4:11399131-11401709 REVERSE LENGTH=2223
Length=2223
Score = 1351 bits (731), Expect = 0.0
Identities = 1158/1360 (85%), Gaps = 45/1360 (3%)
Strand=Plus/Plus
Query 17 ATGGAACATGTCAGAGTTATCTTCTTCTTCTTTGCTTGTTTCCTAACGCTTGTTCCA-TT 75
||||||||||||||||||||||| ||||||||||||||| |||||| | |||| ||| ||
Sbjct 1 ATGGAACATGTCAGAGTTATCTTTTTCTTCTTTGCTTGTGTCCTAAAGATTGTACCATTT 60
Query 76 -TCATGCCTTTGCTCAGGTA-GATTCCTATGAGTTTGATCCAGATTTCAACTGTGTTG-- 131
|| || ||| || || | | ||| ||||||||| ||||| |||||||||||| |
Sbjct 61 ATC-TG-CTTAGCACA-GAAGGATAAATATGAGTTTCCTCCAGGTTTCAACTGTGTAGCT 117
Query 132 A-TCGTGGCAACTTCACGGCGAACAGCACTTTTGCCGGGAATCTCAACCGACTTGTCTCC 190
| | | ||||| |||||||| |||||| |||| || || ||||||||| | |||||||||
Sbjct 118 AGTGGAGGCAATTTCACGGCCAACAGCTCTTTCGCTGGTAATCTCAACGGCCTTGTCTCC 177
Query 191 TCTCTCTCCTCACTCAAATCCAAAGCTTATGGCTTCTACAACCTCTCTTCTGGAGACTCA 250
|||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 178 TCTCTCTCGTCACTCACATCCAAACCTTATGGCTTCTACAACCTCTCTTCTGGAGATTCA 237
Query 251 TCTGGAGAAAGAGCTTATGCAATTGGT-TTGTGTAGAAGAGAAGTCAAAAGAGATGATTG 309
||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct 238 TCTGGAGAAAGAGCTTATGCAATTGGTCTT-TGTAGAAGAGAAGTAAAAAGAGATGATTG 296
Query 310 TCTCAGCTGTATTCAGACAGCTGCAAGAAACCTCACCGAGCAGTGTTCACGGTCAAAGCA 369
||||||||| ||||||| ||||||||||||||||| |||||||||| ||| | |||| ||
Sbjct 297 TCTCAGCTGCATTCAGATAGCTGCAAGAAACCTCATCGAGCAGTGTCCACTGACAAATCA 356
Query 370 AGCTGTTGTGTGGTACACACACTGCATGTTTCGTTATTCGAACAGGACAATCTATGGAAG 429
|||||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||||
Sbjct 357 AGCTGTTGTGTGGTACACACACTGTATGTTTCGTTACTCGAACATGATAATCTATGGAAG 416
Query 430 AAAAGAAACGAATCCGACTAAGGCTTTT-ATTGCCGGTGAAGAGATATCAGCAAACAGAG 488
|||||| |||| || ||| | ||||| | |||||| || | ||||||||||||||||
Sbjct 417 AAAAGAGACGACCCCAACTCTGTCTTTTCA-AGCCGGTAAAAATATATCAGCAAACAGAG 475
Query 489 ATGACTTTGAGCGTCTGCAGAGAGGACTATTGGACAGACTCAAAGGAATTGCGGCGGCTG 548
|||| ||||| |||||||||| || ||||||||||||||||||||| ||||| || ||||
Sbjct 476 ATGAGTTTGATCGTCTGCAGATAGAACTATTGGACAGACTCAAAGGGATTGCTGCAGCTG 535
Query 549 GTGGGCCGAATAGGAAATACGCTCAAGGGAATGGTTCAGCT-TCGGCGGGGTA-CCGGAG 606
||||||| ||||| |||||||||||||||| ||||| | | | ||| ||||| ||| |
Sbjct 536 GTGGGCCAAATAGAAAATACGCTCAAGGGAGCGGTTCGGGTGT-GGCAGGGTACCCGCA- 593
Query 607 ATTCTATGGAACTGTC-CAATGTACGCCGGATTTATCTGAACAGGATTGTAATGATTGTC 665
|||||| |||| || | || |||||||||||||| |||||||||||||||||||| ||||
Sbjct 594 ATTCTACGGAAGTG-CACACTGTACGCCGGATTTGTCTGAACAGGATTGTAATGACTGTC 652
Query 666 TAGTTTTTGGGTTTGAGAATATCCCAAGTTGTTGTGATGCTGAGATTGGTCTTCGGTGGT 725
|||| ||||| ||||| || |||||| ||||||||| || | || |||||||| ||||||
Sbjct 653 TAGTCTTTGGTTTTGAAAAGATCCCAGGTTGTTGTGCTGGTCAGGTTGGTCTTAGGTGGT 712
Query 726 TTTCTCCTAGTTGTAACTTCCGGTTTGAGACGTGGCGATTCTATGAGTTTGATGCCGACC 785
||| ||||||||||| || | | |||||||| ||||||||||| ||||| |||||||| |
Sbjct 713 TTTTTCCTAGTTGTAGCTACAGATTTGAGACCTGGCGATTCTACGAGTTCGATGCCGATC 772
Query 786 TAGAGCCAGATCCACCTGCAATTCAGCCTGCTGATTCACCACCATCAGCTGCAAGAACTG 845
||||||| ||||||||||| |||||||||||||| || ||| ||||||||||||||||||
Sbjct 773 TAGAGCCTGATCCACCTGCTATTCAGCCTGCTGACTCCCCAACATCAGCTGCAAGAACTG 832
Query 846 AGAGGACAGGAAAGGGCAAAGGTGGATCTAAAGTCATTATCGCGATAGTCATCCCGATAG 905
|||| ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||
Sbjct 833 AGAGAACAGGAAAGGGCAAAGGTGGATCTAAAGTCATTGTTGCGATAGTCATCCCAATAG 892
Query 906 TTCTTGTTGCGTTACTCACAATTTGCCTATGCTTGGTCTTGAAGTGGAGGAAGAACAAGT 965
|| ||||||||||| | ||||||||||||||||| |||||||||||| |||||||||||
Sbjct 893 TTTTTGTTGCGTTATTTGCAATTTGCCTATGCTTGCTCTTGAAGTGGAAGAAGAACAAGT 952
Query 966 CTGGAGATAGAAACAAAGTT--CTTGGGA-AATCACCTT-TGTCGGG-ATCA--AT-T-G 1016
||| || |||| ||||| | | | || | ||| | | || ||| || | |
Sbjct 953 CTGTAGGTAGAGTCAAAGGTAACAAAC-ACAACCTTCTTCTTTTGGTTATCGTTATCTTG 1011
Query 1017 C--CGA--GGATGAGTTCTCGAACACAGAATCACTCTTAGTTCATTTTGAAACTCTAAAG 1072
| | |||||||||||| | || || | ||||| | |||||||||||||||
Sbjct 1012 TTACAAAAGGATGAGTTCTC-A-----GATTCGTTGGTAGTTGACTTTGAAACTCTAAAG 1065
Query 1073 ACAGCAACAGATAACTTTTCTTCAGAAAACGAACTTGGACGTGGTGGGTTTGGTTCAGTT 1132
||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct 1066 GCAGCAACAGATAACTTTTCACCAGAAAATGAACTTGGACGTGGTGGGTTTGGCTCAGTT 1125
Query 1133 TATAAGGGTGTATTCCCTCACGGGCAAGAAATCGCGGT-AAAGAGATTATCGGGTAATTC 1191
||||||||||| ||| | ||||||||||||||||| ||| ||||||||| ||| |||
Sbjct 1126 TATAAGGGTGTGTTCTCGGGTGGGCAAGAAATCGCGGTGAAA-AGATTATCGTGTACTTC 1184
Query 1192 TGGACAAGGAGACAACGAGTTCAAGAACGAAATATTACTACTTGCGAAGCTTCAACATAG 1251
||||||||||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 1185 AGGACAAGGAGACAGTGAATTCAAGAACGAAATTTTACTTCTTGCAAAGCTTCAACATAG 1244
Query 1252 GAACCTGGTTAGGCTTAT-AGGTTTCTGCATACAAGGACAAGAAAGAATCCTTGTCTATG 1310
|||| |||||||||| || |||||| |||||| ||||||||||| |||||||||||||||
Sbjct 1245 GAACTTGGTTAGGCT-ATTAGGTTTTTGCATAGAAGGACAAGAACGAATCCTTGTCTATG 1303
Query 1311 AGTTCATCAAGAATGCTAGTCTTGACCAGTTT-ATCTTCG 1349
||||||||||||| |||||||||||| | ||| |||||||
Sbjct 1304 AGTTCATCAAGAACGCTAGTCTTGACAA-TTTCATCTTCG 1342
Score = 859 bits (465), Expect = 0.0
Identities = 624/701 (89%), Gaps = 9/701 (1%)
Strand=Plus/Plus
Query 1358 AAGCGTCAACTTTTGGATTGGGTG-GTGCGATACAAAATGATCGGAGGAATTGCTAGAGG 1416
|||||||||||||||||||||| | ||||||||||||||||| || ||| ||||||||||
Sbjct 1435 AAGCGTCAACTTTTGGATTGGG-GAGTGCGATACAAAATGATAGGTGGAGTTGCTAGAGG 1493
Query 1417 ACTTCTTTATCTTCATGAAGACTCTCGTTTCCGGATAATTCACCGTGATCTTAAAGCTAG 1476
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1494 ACTTCTTTATCTTCATGAAGACTCTCGTTACCGGATAATTCACCGTGATCTTAAAGCTAG 1553
Query 1477 CAACATTCTTTTGGACCAAGAAATGAATCTGAAAATCGCAGATTTTGGATTAGCTAAACT 1536
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1554 CAACATTCTTTTGGACCAAGAAATGAATCCGAAAATCGCAGATTTTGGATTAGCTAAACT 1613
Query 1537 CTTTGACACAGGCCAAACCAT-GACACATCGATTCACAAGCAGGATTGCAGGAACTTACG 1595
|| |||||||| |||||| | |||||||||||| ||||||| ||||||||||||||||
Sbjct 1614 CTATGACACAGACCAAACT-TCGACACATCGATTTACAAGCAAAATTGCAGGAACTTACG 1672
Query 1596 GATATATGGCTCCGGAATACGCAATGCATGGACAATTCTCTGTGAAAACAGATGTTTTCA 1655
| ||||||||||| |||||||| || | || |||||||| ||||||||||| |||||||
Sbjct 1673 GGTATATGGCTCCAGAATACGCTATTTACGGTCAATTCTCGGTGAAAACAGACGTTTTCA 1732
Query 1656 GCTTGGGTGTATTAGTCATTGAGATCATTACAGGTAAAAGAAACAACAATGGTGGGTCTA 1715
|||| |||||||||||||| ||||||||||| ||||| ||||||| |||||| | || |
Sbjct 1733 GCTTCGGTGTATTAGTCATAGAGATCATTACGGGTAAGGGAAACAATAATGGTCGATCAA 1792
Query 1716 ATGGTGATGAAGATGCAGAAGATCTTCTTAGTTGGGTGTGGAGAAGCTGGAGAGAAGACA 1775
||| ||| ||||| |||||| |||| |||||||||||||||||| | |||||||||||||
Sbjct 1793 ATGATGACGAAGAGGCAGAAAATCTCCTTAGTTGGGTGTGGAGATGTTGGAGAGAAGACA 1852
Query 1776 CTATACTAAGCGTGATCGATCCGAGTTTAACCGCAGGATCAAGAAACGAGATCTTGAGAT 1835
|||||||||||| || ||||||||| ||||| | |||||||||| ||||||||||||||
Sbjct 1853 TTATACTAAGCGTTATTGATCCGAGTCTAACCACGGGATCAAGAAGCGAGATCTTGAGAT 1912
Query 1836 GCATACACATTGGTCTTTTATGTGTTCAAGAAAGTGCAGCGACTAGACCAACAATGGCAA 1895
||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| |
Sbjct 1913 GCATACACATTGGTCTTTTATGTGTTCAAGAAAGTCCAGCGAGTAGACCAACTATGG-AT 1971
Query 1896 -CGGTTTCTCTCATGCTCAATAGCTATTCTTTTACTCTCCCGACGCCTTCGAGGCCTGCG 1954
||||| |||| ||||||||||||||||| | ||||||||| |||||||| ||||| ||
Sbjct 1972 TCGGTTGCTCTAATGCTCAATAGCTATTCCTATACTCTCCCAACGCCTTCAAGGCCCGCC 2031
Query 1955 TTTGTGTTAGAGAGTGTGATACCTTCGA--A-TGTTTCTTCTTCAACGGATGGGTTACAA 2011
|||| |||||||||||| || ||||||| | |||||||||||| || || |||| |
Sbjct 2032 TTTGCGTTAGAGAGTGTCATGCCTTCGATGAATGTTTCTTCTTCCACAGAACCGTTATTA 2091
Query 2012 ATGTCGTCGAATGATGTCACTGTTTCTGAGTTTTCTCCTCG 2052
||||| | |||||||||||||||||||||||| ||||||||
Sbjct 2092 ATGTCCTTGAATGATGTCACTGTTTCTGAGTTATCTCCTCG 2132
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108232375020
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5