BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492774 Length=1432 Score E Sequences producing significant alignments: (Bits) Value AT4G21130.1 | Symbols: EMB2271 | Transducin/WD40 repeat-like su... 1096 0.0 > AT4G21130.1 | Symbols: EMB2271 | Transducin/WD40 repeat-like superfamily protein | chr4:11274296-11276299 FORWARD LENGTH=1465 Length=1465 Score = 1096 bits (593), Expect = 0.0 Identities = 746/818 (91%), Gaps = 17/818 (2%) Strand=Plus/Plus Query 1 AGGGAGagaagaatgaaattcaagaacgagaagaagaaaggct-tcggggcgaagagaat 59 |||||||||||||||||| | ||||||||||||||| | | ||||||||||||| Sbjct 1 AGGGAGAGAAGAATGAAA--C----TCGAGAAGAAGAAAGG-TATTGGGGCGAAGAGAAG 53 Query 60 cgggaaaaagaGTTCCATCGATCGA-GATCCTTTCTTCGAGGAAGAGACGA-AGAAGCGG 117 |||||||||||||||||||||| | ||||||||||| ||||||||||| | |||||||| Sbjct 54 AGGGAAAAAGAGTTCCATCGATC-ATGATCCTTTCTTAGAGGAAGAGAC-AGAGAAGCGG 111 Query 118 GGAAAATTCAATTAC-A--ATGATGATGATATCGAGTCTGTCGAATCTGAAGAGGAAGGA 174 |||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||| Sbjct 112 AGAAAATTCAATTACGATGATGATGATGATATCGAATCTGTAGAATCTGAAGAGGAAGGG 171 Query 175 AAGGTTGGTGAGGAGATAGAGGATAAGTTTGCCT-ATGAGACGGTAGGTGAGAAACGAAA 233 ||||||||||||||| | |||||| |||||| || ||||||||||||| ||||||||||| Sbjct 172 AAGGTTGGTGAGGAGGTGGAGGATGAGTTTG-CTCATGAGACGGTAGGCGAGAAACGAAA 230 Query 234 GAGATTTTTGGAAGAGACTTCGGATAGAATCGAAGAGGCGAAGCGGAAAGAGCGTGAAGA 293 |||| | ||| || |||| | ||||||||||||||||||| | || ||||| |||||| Sbjct 231 GAGACTGGCGGAGGATACTTTGAATAGAATCGAAGAGGCGAAACAGAGAGAGCATGAAGA 290 Query 294 AGATGACGAGGAAGATGATGGTGTTAGAGATTCGCTTGTGGTGAAGACTCTAATGCAGGA 353 |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||||| Sbjct 291 AGATAACGAGGAAGATGATGATTTTAGAGATTCGCTTGTGGCAAAGACTCTAATGCAGGA 350 Query 354 GCAGCTCGAGAAGAGTGGTCGTGTTCGGAGAGCCATTGCATCGAGGGTTCAAGAACCACG 413 |||||||||||||||||||||||||||||||||| ||||| |||||||||||| | || Sbjct 351 ACAGCTCGAGAAGAGTGGTCGTGTTCGGAGAGCCAATGCATTGAGGGTTCAAGATCTACA 410 Query 414 GAGTAGCGATGAGTTTCGTATTATAGTCAAACACCAACAATCTGTTACAGCAGTAGCTCT 473 |||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||| Sbjct 411 GAGTAGCGATAAGTTTCGTGTTATAGTCAAACACCAACATTCTGTTACAGGAGTAGCTCT 470 Query 474 ATCAGATGATGATTCAAGAGGGTTCTCAGTTTCGAAGGACGGTACTATTCTGCATTGGGA 533 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 471 ATCAGATGATGATTCAAGAGGGTTCTCAGTTTCGAAAGACGGTACTATTCTGCATTGGGA 530 Query 534 TGTATCGTCTGGTAAAAGCGATGAGTACAAATGGCCAAGCGATGAAGTTTTGAAGTCTCA 593 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 531 TGTATCTTCTGGTAAAAGTGATGAGTACAAATGGCCAAGCGATGAAGTTTTGAAGTCTCA 590 Query 594 CGGATTAATCTTCCAGGAATCTTGGAATACAAGACATAACAAACAATCTCTAGCGCTAGC 653 ||| |||| ||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct 591 CGGGTTAAAGTTCCAGGAATCTTGGTATACAAGACATAACAAACAATCTCTAGCATTAGC 650 Query 654 AGTTAGCTCTGATGGCCGTTATTTAGCGACTGGAGGAGTTGATTGCCATGTTCATTTGTG 713 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 651 TGTTAGCTCTGATGGCCGGTATTTAGCGACTGGAGGAGTTGATTGCCATGTTCATTTGTG 710 Query 714 GGATATTCGTACACGAGAGCATGTCCAGGCCTTTACAGGTCACCGTGGCATTGTTTCTAG 773 |||||| || |||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 711 GGATATCCGAACACGAGAGCATGTCCAGGCTTTTACAGGTCACTGTGGCATTGTTTCTAG 770 Query 774 TCTATGCTTTAGAGAAGGAACTGCAGAACTCTTTTCTG 811 |||||||||||||||||||||||||||||||||||||| Sbjct 771 TCTATGCTTTAGAGAAGGAACTGCAGAACTCTTTTCTG 808 Score = 961 bits (520), Expect = 0.0 Identities = 588/622 (95%), Gaps = 0/622 (0%) Strand=Plus/Plus Query 811 GAAGATAGAATATATATAGACTCAAGTTTTGGACACCAGTCTGAAATTCTAAGCATTGAT 870 ||| |||||| ||||||||| ||| |||||||||||||||||||| ||||| ||||||| Sbjct 844 GAACATAGAACATATATAGAATCATGTTTTGGACACCAGTCTGAACTTCTATCCATTGAT 903 Query 871 GCTCTAAGAAGGGAGCGCGTTCTCAGTGTTGGACGCGATAGAACATTGCAGTTATACAAG 930 |||||| | |||||||| ||||||||||||||||||||||||||| |||||||||| ||| Sbjct 904 GCTCTAGGGAGGGAGCGTGTTCTCAGTGTTGGACGCGATAGAACAATGCAGTTATATAAG 963 Query 931 GTTCCCGAGTCTACTCATTTGATCTTTCGAGCTTCTGAATCAAATCTTGAGTGCTGCTGT 990 |||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||||||| Sbjct 964 GTTCCCGAGTCTACTCGGTTGATCTATCGAGCTTCCGAATCAAATTTTGAGTGCTGCTGT 1023 Query 991 TTTGTTAGTAGTGATGAGTTTTTGGCCGGATCAGATAATGGAAGCATTTCACTTTGGTCC 1050 ||||||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||||| Sbjct 1024 TTTGTTAATAGTGATGAGTTTTTGTCCGGATCAGATAATGGAAGTATTGCACTTTGGTCC 1083 Query 1051 ATTTTGAATAAGAAACCAGTGTTTATCGTTAAGAATGCTCACCACGTGATAGCTGATCAT 1110 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1084 ATTTTGAAAAAGAAACCAGTGTTTATCGTTAACAATGCTCACCACGTGATAGCTGATCAT 1143 Query 1111 GATTCTGTTAACCATAACTGTACATCAGCATGTTCTTGGGTCAGTTCAGTTGCTGTCTGT 1170 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1144 GATTCTGTTAACCATAACTGTACACCAGCATGTTCTTGGGTCAGTTCAGTTGCTGTCTGT 1203 Query 1171 AGAGGTAGCGATCTCGCTGCATCGGGAGCTGGTGATGGTTGTGTGCGTTTATGGGGTGTT 1230 ||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1204 AGAGGTAGCGAGCTTGCTGCATCGGGAGCTGGTAATGGTTGTGTGCGTTTATGGGGTGTT 1263 Query 1231 GAAAGTGGATCTAGAGCTATACAACCTTTATATGAGCTTCCACTTCCTGGGTTTGTGAAC 1290 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1264 GAAAGTGGATCTAGTGCTATACAACCTTTATACGAGCTTCCACTTCCTGGGTTTGTGAAC 1323 Query 1291 TCTTTAGCTTTTGCAAAATCTGGCCAGTTTCTGATAGCTGGTGTTGGACAGGAACCGCGA 1350 ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| Sbjct 1324 TCTTTAGCTTTTGCAAAATCTGGTCGGTTTCTGATCGCTGGTGTTGGACAGGAACCGCGG 1383 Query 1351 CTCGGAAGATGGGGTTGCTTAAAATCTGCGCAGAACGGTGTTACAATACATCCCTTAAGG 1410 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1384 CTCGGAAGATGGGGTTGCTTAAAATCTGCGCAGAACGGTGTTGCAATACATCCCTTAAGG 1443 Query 1411 CTTTCATGAAGGGATCTCAATT 1432 |||||||||||||||||||||| Sbjct 1444 CTTTCATGAAGGGATCTCAATT 1465 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70581966270 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5