BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492789
Length=2030
Score E
Sequences producing significant alignments: (Bits) Value
AT4G20980.1 | Symbols: | Eukaryotic translation initiation fac... 3365 0.0
AT5G44320.1 | Symbols: | Eukaryotic translation initiation fac... 1692 0.0
> AT4G20980.1 | Symbols: | Eukaryotic translation initiation factor
3 subunit 7 (eIF-3) | chr4:11216931-11219337 FORWARD LENGTH=2126
Length=2126
Score = 3365 bits (1822), Expect = 0.0
Identities = 1967/2036 (97%), Gaps = 13/2036 (1%)
Strand=Plus/Plus
Query 1 AGAATTAGGGTTTCCGCTTTTCCCACACACACAGAGCTGCAACACTATCTTCTCAAAAAT 60
||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||
Sbjct 13 AGAATTAGGGTTTCCGC-TTT-CCACACACAC--AGCTGCAACACTATCTTCTCAGAAAT 68
Query 61 GGTAGCCGAAGCTTTCGAATTCGTCGCCGTTCCTTTCAATTCCGATGGCTGGGGTCCTCC 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 69 GGTAACCGAAGCTTTCGAATTCGTCGCCGTTCCTTTCAATTCCGATGGCTGGGGACCTCC 128
Query 121 AGACGCTTCCGACGTTTCCTCCTCCGCCTCCT-CCACCAGCGTCGCCGCCGCTAATCTTC 179
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 129 AGACGCTTCCGACGTTTCCTCCTCCGCCT-CTCCCACCAGCGTCGCCGCCGCTAATCTTC 187
Query 180 TCCCAAACGTTCCTTTCGCTTCCTTCTCCCGTTCCGATAAGCTCGGCCGTGTAGCTGATT 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 TCCCGAACGTTCCTTTCGCTTCCTTCTCCCGTTCCGATAAGCTCGGCCGTGTAGCTGATT 247
Query 240 GGACTCGCAATCTCTCTAATCCCTCCGCTCGTCCTCCCACCGGATCCAAATCAGATCCGT 299
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 248 GGACTCGCAATCTCTCTAATCCATCCGCTCGTCCTAACACCGGATCCAAATCAGATCCGT 307
Query 300 CTGCAGTTTTCGATTTCTCCGCTTTCGCTATCGACGAAGGATTTGGTCTCACTTCCTCCG 359
|||||||||||||||||||||||||||| ||||||||||| || |||||| |||||||||
Sbjct 308 CTGCAGTTTTCGATTTCTCCGCTTTCGCAATCGACGAAGGCTTCGGTCTCGCTTCCTCCG 367
Query 360 GTGGAAATCCCGATGAGGACGCAGCTTTCCGTCTCGTCGACGGTAAACCTCCGCCGCGTC 419
|||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 GTGGTAATCCCGACGAAGACGCAGCTTTCCGTCTCGTCGACGGTAAACCTCCGCCGCGTC 427
Query 420 CTAAATTCGGACCTAAATGGCGTTTCAATCCTCACCACAATCGGAATCAGCTTCCTCAAC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 428 CTAAATTCGGACCTAAATGGCGTTTCAATCCTCACCACAATCGGAATCAGCTTCCTCAAC 487
Query 480 GGCGAGATGAAGAAGTCGAAGCTAAGAAGCGTGACGCTGAGAAGGAACGAGCTCGTCGTG 539
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 488 GGCGAGATGAAGAAGTTGAAGCTAAGAAGCGTGATGCTGAGAAGGAACGAGCTCGTCGTG 547
Query 540 ATCGTCTCTACAATAACAACCGTAACAACATCCATCACCAGCGCCGTGAAGCCGCCGCTT 599
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 548 ATCGTCTCTACAATAACAACCGTAACAACATCCATCACCAACGCCGTGAAGCTGCCGCTT 607
Query 600 TCAAATCATCCGTTGATATTCAGCCGGAGTGGAACATGCTTGAGCAGATCCCTTTCTCAA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 TCAAATCATCCGTTGATATTCAGCCGGAGTGGAACATGCTTGAGCAGATCCCTTTCTCAA 667
Query 660 CATTCTCGAAGCTCTCGTTCACAGTTCAAGAACCAGAAGATCTACTTCTCTGTGGTGGCC 719
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 668 CATTCTCGAAGCTCTCGTACACAGTTCAAGAACCAGAAGATCTTCTTCTCTGTGGTGGCC 727
Query 720 TTGAGTACTACAACCGCGTTTTCGATCGCACAACGCCTAAAAACGAACGCAGACTCGAGC 779
||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||
Sbjct 728 TTGAGTACTACAACCGCCTTTTCGATCGCATAACGCCGAAAAACGAACGCAGACTCGAGC 787
Query 780 GTTTCAAGAACAGGAACTTCTTCAAAGTCACTACGAGTGATGATCCTGTGATTAGGCGTT 839
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 788 GTTTCAAGAACAGGAACTTCTTCAAAGTCACTACTAGTGATGATCCTGTGATTAGGCGTT 847
Query 840 TAGCTAAGGAAGACAAAGCTACTGTTTTCGCAACTGATGCTATATTAGCTGCTCTTATGT 899
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 848 TAGCTAAGGAAGACAAAGCTACTGTTTTCGCTACTGATGCTATATTAGCTGCTCTTATGT 907
Query 900 GTGCTCCTCGATCTGTTTACTCTTGGGATATTGTTATTCAACGTGTTGGTAACAAACTGT 959
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 908 GTGCTCCTAGATCTGTTTACTCTTGGGATATTGTTATTCAACGTGTTGGTAACAAACTGT 967
Query 960 TCTTTGACAAGAGAGATGGATCACAGCTTGATTTGCTGTCTGTGCATGAGACATCTCAAG 1019
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 968 TCTTTGACAAGAGAGATGGATCACAGCTTGATTTGTTGTCTGTGCATGAGACATCTCAAG 1027
Query 1020 AGCCATTGCCTGAGGCTAAAGATGATATCAATTCTGCTTACTCTCTAGGTGTGGAAGCTG 1079
|||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1028 AGCCATTGCCTGAGTCTAAAGATGATATCAATTCTGCTCATTCTCTAGGTGTGGAAGCTG 1087
Query 1080 CTTATATCAATCAGAACTTTTCGCAGCAGGTTTTGGTTAGAGATGGAAAGAAGGAAACTT 1139
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 CTTACATCAATCAGAACTTTTCGCAGCAGGTTTTGGTTAGAGATGGAAAGAAGGAAACTT 1147
Query 1140 TTGATGAGGCGAATCCATTTGCTAATGAAGGTGAAGAGATTGCTTCTGTTGCTTATAGGT 1199
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 TTGATGAAGCCAATCCATTTGCTAATGAAGGTGAAGAGATTGCTTCTGTTGCTTATAGGT 1207
Query 1200 ATAGAAGGTGGAAGCTTGATGAGAATATGCATCTTGTTGCGAGGTGTGAGTTACAGAGTG 1259
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1208 ATAGAAGGTGGAAGCTTGATGATAATATGCATCTTGTTGCGAGGTGTGAGTTACAGAGTG 1267
Query 1260 TTGCTGATCTCAATAACCAGAGGTCGTTCCTTACTTTGAATGCTCTTAACGAGTTTGATC 1319
||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1268 TTGCTGATCTCAACAACCAAAGGTCGTTTCTTACTTTGAATGCTCTTAACGAGTTTGATC 1327
Query 1320 CTAAGTACTCTGGTGTTGATTGGAGGCAGAAGCTTGAAACTCAGAGAGGTGCGGTTTTGG 1379
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1328 CTAAGTACTCTGGTGTTGATTGGAGACAGAAGCTTGAAACTCAGAGAGGTGCGGTTTTAG 1387
Query 1380 CTACCGAATTGAAGAACAATGGGAACAAGTTGGCTAAATGGACTGCACAAGCTCTCTTGG 1439
|||| ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||
Sbjct 1388 CTACAGAATTGAAGAACAATGGAAATAAGTTGGCTAAATGGACTGCACAAGCTTTATTGG 1447
Query 1440 CTAATGCTGATATGATGAAGATTGGCTTTGTCTCTAGGGTTCATCCTCGTGATCATTTCA 1499
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1448 CTAATGCTGATATGATGAAGATTGGTTTTGTCTCTAGGGTTCATCCTCGTGATCATTTCA 1507
Query 1500 ACCATGTTATATTATCTGTTTTGGGGTATAAGCCGAAGGATTTCGCTGGACAGATTAATC 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1508 ACCATGTTATATTATCTGTTTTGGGGTATAAGCCGAAGGATTTCGCTGGACAGATTAATC 1567
Query 1560 TCAACACTTCTAACATGTGGGGAATTGTGAAATCCATAGTTGATCTGTGTATGAAACTTA 1619
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1568 TCAACACTTCTAACATGTGGGGGATTGTGAAATCCATAGTTGATCTGTGTATGAAACTAA 1627
Query 1620 GCGAAGGGAAATATGTTCTTGTGAAGGATCCATCGAAGCCTCAAGTGAGGATTTACGAGG 1679
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1628 GCGAAGGGAAGTATGTTCTTGTGAAGGATCCATCGAAGCCTCAAGTGAGGATTTATGAGG 1687
Query 1680 TTCCACCTGATGCGTTT-GAGAATGATTACGTTGAGGAACCGTTGCCTGAAGATGAACAG 1738
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1688 TTCCACCTGATGC-TTTCGAGAATGATTACGTTGAGGAACCGTTGCCTGAAGATGAACAG 1746
Query 1739 GTTCAGCCAACTGAGGAAAACGCAGAGGGAGCAGAAGCAAGTGTAGCTGCAGCTAAAGAA 1798
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1747 GTTCAGCCAACTGAGGAAAACACAGAGGGAGCAGAAGCAAGTGTAGCTGCAACTAAAGAA 1806
Query 1799 ACCGAGGATAAGAAAGCTGATGAAGCTCAAGCTTGATGGTTATAAAGTCAGGTCCAAAGT 1858
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1807 ACCGAGGAGAAGAAAGCTGATGATGCTCAAGCTTGATGGTTATAAAGTCAGGTCCAAAGT 1866
Query 1859 CTACACCTTTCGTTTCTGGGTTCTTTTTGAGAGTTGAAGCTTCAATCAAACAACAACAAT 1918
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1867 CTACACCTTTCGTTTCTGGGTTCTTTT-GAGAGTTGAAGCTTCAATCAAACAACAACAAT 1925
Query 1919 GGAGGtt--ttttttA-TTATCTTGTCCTTTTCCAA-TTTTTGTGGTACTGCTGTAATTT 1974
||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 1926 GGAGGTTCCTTTTTTAATTATCTTGTCCTTTTTCAAATTTTTGTGGTACTGCTGTAATTT 1985
Query 1975 TGAGTCAGAAATGAGATTTTAGAACACTATCTTCGTGACATCTTTTGGAAAATCAT 2030
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1986 TAAGTCAGAAATGAGATTGTAGAACACTATCTTCGTGACATCTTTTGGAAAATCAT 2041
> AT5G44320.1 | Symbols: | Eukaryotic translation initiation factor
3 subunit 7 (eIF-3) | chr5:17854589-17856680 REVERSE LENGTH=2092
Length=2092
Score = 1692 bits (916), Expect = 0.0
Identities = 1483/1750 (85%), Gaps = 66/1750 (4%)
Strand=Plus/Plus
Query 51 TCTCAAAAATGGTAG-CCGAAGCTTTCGAATTCGTCGCCGTTCCTTTCAATTCCGATGGC 109
|||||| |||||| | ||||| |||||| ||| | | || || ||||||||||||||
Sbjct 6 TCTCAACAATGGT-GTTTGAAGCATTCGAAGTCGGCACAGTCCCATTCAATTCCGATGGT 64
Query 110 TGGGGTCCTCCAGACGCTTCCGACGTTTCCTCCTCCGCCTCCTCCACCAGCGTCGCCGCC 169
||||| || ||||| |||||||| | || ||||||||||||||||| ||
Sbjct 65 TGGGGACCACCAGATGCTTCCGA------C-ACT-----TCCTCCACCAGCGTCGCGGCG 112
Query 170 GCTAATCTTCTCCCAAACGTTCCTTTCGCTTCCTTCTCCCGTTCCGATAAGCTCGGCCGT 229
|| ||||| ||||||||||| || |||||||||||||| || ||||| || ||||| ||
Sbjct 113 GCGAATCTCCTCCCAAACGTCCCCTTCGCTTCCTTCTCACGATCCGAAAAACTCGGACGC 172
Query 230 GTAGCTGATTGGACTCGCA-ATCTCTCTAATCCCTCCGCTCGTCCTCCCACCGGATCCAA 288
|| |||||||||||||| | |||||| ||||| || |||||||||| ||||||||||||
Sbjct 173 GTTGCTGATTGGACTCG-AGCTCTCTCAAATCCATCAGCTCGTCCTCACACCGGATCCAA 231
Query 289 ATCAGATCCGTCTGCAG-TTTTCGATTTCTCCGCTTTCGCTA-TCGACGAAGGATTTGGT 346
||||||||| || || | | ||||||||||| ||||| || | | || ||||||||||||
Sbjct 232 ATCAGATCCATCAGC-GATCTTCGATTTCTCAGCTTTTGC-AGTAGATGAAGGATTTGGT 289
Query 347 CTCACTTCCTCCGGTGGAAATC-CCGATGAGGACGCAGCTTTCCG-TCTCGTCGACGGTA 404
|| || ||| |||||||| | |||| || ||||| |||||||| | | |||||||| |
Sbjct 290 CTAACAAACTCAGGTGGAAA-CGCCGACGAAGACGCCGCTTTCCGAT-TAGTCGACGGAA 347
Query 405 AACCTCCGCCGCGTCCTAAATTCGGACCTAAATGGCGTTTCAATC-CTCACCACAATCGG 463
|||| |||||||||||||||||||||||||||||| | ||||||| | |||| || ||
Sbjct 348 AACCACCGCCGCGTCCTAAATTCGGACCTAAATGGAGATTCAATCAAT-ACCATAACCGA 406
Query 464 AATCAGCTTCCTCAACGGCGAGATGAAGAAGTCGAAGCTAAGAAGCGTGACGCTGAGAAG 523
||||||||||||||||| || ||||||||||| ||||||||||| ||||| ||||||||
Sbjct 407 AATCAGCTTCCTCAACGTCGTGATGAAGAAGTTGAAGCTAAGAAACGTGAAGCTGAGAAA 466
Query 524 GAACGAGCTCGTCGTGATCGTCTCTACAATAACAACCGTAACAACATCCATCACCAGCGC 583
|| |||||||||||||||||||||||||||||||| |||||||| || ||||| || |||
Sbjct 467 GATCGAGCTCGTCGTGATCGTCTCTACAATAACAATCGTAACAATATTCATCAGCAACGC 526
Query 584 CGTGAAGCCGCCGC-TTTCAAATCATCCGTTGATATTCAGCCGGAGTGGAACATGCTTGA 642
|||||||||||||| ||| |||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct 527 CGTGAAGCCGCCGCGTTT-AAATCATCAGTTGATATTCAACCGGAATGGAATATGCTTGA 585
Query 643 GCAGA-TCCCTTTCTCAACATTCTCGAAGCTCTCGTTCACAG-TTCAAGAACCAGAAGAT 700
||||| ||| ||| || || ||||| ||||| ||||| |||| ||| ||||| ||||||
Sbjct 586 GCAGATTCCGTTT-TCGACTTTCTCTAAGCTTTCGTTTACAGTTTC-TGAACCTGAAGAT 643
Query 701 CTACTTCTCTGTGGTGGCCTTGAGTAC-TA-CAACCGCGTTTTCGATCGCACAACGCCTA 758
|| ||||| |||||||| ||||||| | || | | | ||||| ||||| | || |||
Sbjct 644 CTTCTTCTTTGTGGTGGACTTGAGT-CTTATGATCGGAGTTTT-GATCGTATTACTCCT- 700
Query 759 AAAAC-GAACGCAGACTCGAGCGTTTCAAGAACAGGAACTTCTTCAAAGTCACTACGAGT 817
||| | || || ||||| |||||||||||||||| ||| ||| || || ||||| |||
Sbjct 701 AAAGCTGATCGTAGACTTGAGCGTTTCAAGAACA-GAA--GCTTTAAGGTTACTACAAGT 757
Query 818 GATGATCCTGTGATTAGGCGT-TTAGCTAAGGAAGACAAAGCTACTGTTTTCGCAACTGA 876
||||||| |||||| || ||| || ||||| ||||| |||||||||||||| || |||||
Sbjct 758 GATGATCTTGTGATCAGACGTCTT-GCTAAAGAAGATAAAGCTACTGTTTTTGCTACTGA 816
Query 877 TGCTATAT-TAGCTGCTCTTATGTGTGCTCCTCGATCTGTTTACTCTTGGGATATTGTTA 935
|||||| | ||||||||||||||||||||||| |||| ||||| || |||||| |||| |
Sbjct 817 TGCTAT-TCTAGCTGCTCTTATGTGTGCTCCTAGATCGGTTTATTCATGGGATCTTGTGA 875
Query 936 TTCAACGTGTTGGTAACAAACTGTTCTTTGACAAGAGAGATGGATCACAGCTTGATTTGC 995
||||||||||||| || || || |||||||| ||||||||||| |||| ||||||||||
Sbjct 876 TTCAACGTGTTGGGAATAAGCTTTTCTTTGATAAGAGAGATGGGTCACCGCTTGATTTGT 935
Query 996 TGTCTGTGCATGAGACATCTCAAGAGCCATTGCCTGAGGCTAAAGATGATATCAATTCTG 1055
| ||||| |||||||| ||||||||||| |||||||||| |||||||||||| || ||||
Sbjct 936 TATCTGTTCATGAGACTTCTCAAGAGCCTTTGCCTGAGGGTAAAGATGATATTAACTCTG 995
Query 1056 CTTACTCTCTAGGTGTGGAAGCTGCTTATATCAATCAGAACTTTT-CGCAGCAGGTTTTG 1114
|| | ||||||||| |||| ||||||||||| |||||||| |||| | ||||||||||||
Sbjct 996 CTCATTCTCTAGGTCTGGAGGCTGCTTATATTAATCAGAA-TTTTGCTCAGCAGGTTTTG 1054
Query 1115 GTT-AGAGAT-GGAAAGAAGGAAACTTTTGATGAGGCGAA-TCCAT-TTGCTAATGAAGG 1170
||| ||| || ||||| | ||||||||||||||| || || ||| | || |||||||||
Sbjct 1055 GTTAAGA-ATGGGAAA-AGGGAAACTTTTGATGA-GCCAATTCC-TAATGTTAATGAAGG 1110
Query 1171 TGAAGAGATTGCTTCTGTTGCTTATAGGTATAGAAGGTGGAAGCTTGATGAGAATATGCA 1230
|||||||| ||||||| |||||||||||||||| || |||||||||||||| | |||| |
Sbjct 1111 TGAAGAGAATGCTTCTATTGCTTATAGGTATAGGAGATGGAAGCTTGATGATAGTATGTA 1170
Query 1231 TCTTGTTGCGAGGTGTGAGTTACAGAGTGTTGCTGATCTCAATAACCAGAGGTCGTTCCT 1290
||| ||||| ||||||||||||||||| || |||| | ||||||||||| ||||| |
Sbjct 1171 TCTAGTTGCTAGGTGTGAGTTACAGAGCACTGTTGATTTGAATAACCAGAGATCGTT-TT 1229
Query 1291 T-ACTTTGAATGCTCTTAACGAGTTTGATCCTAAGTACTCTGGTGTTGATTGGAGGCAGA 1349
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1230 TAACTTTGAATGCTCTTAACGAGTTTGATCCTAAGTACTCTGGTGTTGATTGGAGACAGA 1289
Query 1350 AGCTTGAAACTCAGAGAGGTGCGGTTTTGGCTACCGAATTGAAGAACAATGGGAACAAGT 1409
||||||| |||||||||||||||||||| |||| || |||||||||||||| || ||||
Sbjct 1290 AGCTTGAGACTCAGAGAGGTGCGGTTTTAGCTAATGAGTTGAAGAACAATGGTAATAAGT 1349
Query 1410 TGGCTAAATGGACTGCACAAGCTCTCTTGGCTAATGCTGATATGATGAAGATTGGCTTTG 1469
| |||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1350 TAGCTAAATGGACTGCGCAGGCTCTCTTGGCTAATGCGGATATGATGAAGATTGGGTTTG 1409
Query 1470 TCTCTAGGGTTCATCCTCGTGATCATTTCAACCATGTTATATTATCTGTTTTGGGGTATA 1529
| || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1410 TTTCGAGGGTTCATCCTCGTGATCATTTTAACCATGTTATATTATCGGTTTTGGGGTATA 1469
Query 1530 AGCCGAAGGATTTCGCTGGACAGATTAATCTCAACACTT-CTAACATGTGGGGAATTGTG 1588
||||||| ||||||||||| ||||| ||||| |||||| | || |||||||||||||||
Sbjct 1470 AGCCGAAAGATTTCGCTGGGCAGATCAATCTGAACACTAAC-AATATGTGGGGAATTGTG 1528
Query 1589 AAATCCATAGTTGATCTGTGTATGAAACTTA-GCGAAGGGAAA-TATGTTCTTGTGAAGG 1646
|| || || ||||||||||||||||| ||| | ||||| ||| |||||||| |||||||
Sbjct 1529 AAGTCGATTGTTGATCTGTGTATGAAG-TTAAGTGAAGG-AAAGTATGTTCTAGTGAAGG 1586
Query 1647 ATCCATCGAAGCCTCAAGTGAGGATTTACGAGGTTCCACCTGATGCGTTTGAGAATGATT 1706
||||||||||||||||||| ||||||||||| ||||| ||||||| ||||| |||||||
Sbjct 1587 ATCCATCGAAGCCTCAAGTTAGGATTTACGAAGTTCCGGCTGATGCATTTGACAATGATT 1646
Query 1707 ACGTTGAGGAACCGTTGCCTGAAGATGAACAGGTTCAGCCAACTGAGGAAAACGCAGA-G 1765
| || ||||| || | |||||||||||||||||||||||| ||||||| ||| | || |
Sbjct 1647 ATGTGGAGGAGCCACTCCCTGAAGATGAACAGGTTCAGCCACCTGAGGAGAACACTGATG 1706
Query 1766 --GGAGCAGA 1773
||||||||
Sbjct 1707 CAGGAGCAGA 1716
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100601892180
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5