BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492806
Length=1626
Score E
Sequences producing significant alignments: (Bits) Value
AT4G20800.1 | Symbols: | FAD-binding Berberine family protein ... 2385 0.0
AT1G26390.1 | Symbols: | FAD-binding Berberine family protein ... 1081 0.0
AT1G26420.1 | Symbols: | FAD-binding Berberine family protein ... 1048 0.0
> AT4G20800.1 | Symbols: | FAD-binding Berberine family protein
| chr4:11139609-11141311 FORWARD LENGTH=1703
Length=1703
Score = 2385 bits (1291), Expect = 0.0
Identities = 1507/1612 (93%), Gaps = 11/1612 (1%)
Strand=Plus/Plus
Query 2 TTCAATCAAAGTAATGAAAGAAGTAGTTTATGTTCTGCTACTTGTTCTTCTTGTTTCGGT 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 35 TTCAATCAAAGTAATGAAAGAAGTAGTTTATGTTCTGCTACTTGTTCTTCTTGTTTCGGT 94
Query 62 TTCAGATGCAAATGAAACGAAACCAAATACTGAAAACTTCCTCCGATGCCTTCGTAATCG 121
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 95 TTCAGATGCAAATGAAACGAAACCAAATATTGAAAACTTCCTCCGATGCCTTCGTAATCG 154
Query 122 GACCAGTCCGAAGAATCCGATCACTGAAGCCCTCTATACTCATGAGAACTCCACCTTCGT 181
||||| |||||||||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct 155 GACCAATCCGAAGAATCCGATCGCCGAAGCCATCTATACTCATGAGAACTCCACCTTCGC 214
Query 182 GTCATCTTACGTGTCCTACACGAAAAATAAACGGTACTCAAACCCTAACGACACAAAACT 241
||| |||||||||||||||||||| || ||||||| | |||||||||||||||||||||
Sbjct 215 GTCTTCTTACGTGTCCTACACGAATAACAAACGGTGTTTAAACCCTAACGACACAAAACT 274
Query 242 AATCGCCATTGTTGCTGCAAAACATGAATCTCATGTTCAGGCAACCGTGGTCTGCGCAAA 301
||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct 275 AATCGCCATTGTTGCTGCAAAACATGAATCTCATGTTCAAGCAACTGTGGTTTGCGCAAA 334
Query 302 GGTC-AATGGAGTCCAGATCCGTATCCGAAGCGGCGGTCACGACTATGAGGGACTTTCAT 360
||| || ||| |||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 335 -GTCAAACGGAATCCAGATCCGTATCCGAAGCGGCGGTCACGACTACGAGGGACTTTC-T 392
Query 361 AT-ATCTCCTCTGTTCCGTTTGTTATTCTCGACATGCACGATCTCCGGTCTATAACCATT 419
| | |||||| |||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 393 TTCACCTCCTCCGTTCCGTTTGTTATCCTTGACATGCACGATCTCCGGTCTATAACCATT 452
Query 420 GACGTGTTCAGAAAGCAAGCTTGGGTTGATGCAGGTGCGACCATGGGAGAGCTCTACACC 479
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 453 GACGTGTTCAGAAAGCAAGCTTGGGTTGATGCTGGTGCGACCATGGGAGAGCTCTACACC 512
Query 480 AAAATCGCAGAGGCTAGCAAAACGCTAGCGTTTGCGGGTGGCGTTTGTCCTACATTAGGG 539
|| ||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct 513 AAGATCGCAGCGGCTAGCAAAACCCTAGCATTTGCGGGTGGCGTTTGCCCTACATTAGGA 572
Query 540 GCGGGAGGACACATCAGCGGCGGAGGATACGGAAATTTGATTAGAAAGTACGGAATTTCA 599
|| |||||||||||||| |||||||||||||||||| |||| |||||||||||||| ||
Sbjct 573 GCTGGAGGACACATCAGTGGCGGAGGATACGGAAATCTGATAAGAAAGTACGGAATCTCG 632
Query 600 GTCGATCATGTCGTTGATGCTCGAATAGTTGATGTCAACGGCAATATCTTGACAGGAGCT 659
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 633 GTCGATCATGTGGTTGATGCTCGAATAGTTGATGTCAACGGCAATATCTTGACAGGAGCT 692
Query 660 ACCTTGGGACGTGATCTATTGTGGGCTATTCGAGGCGGTGGGGGCGCAAGCTTCGGAGTT 719
||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 693 ACCTTGGGACGTGATCTATTGTGGGCTATTCGAGGCGGTGGGGGCGCTAGCTTTGGCGTT 752
Query 720 ATCCTTTCCTGGAAAATCAACCTCGTCGATGTTCCAAAGACCGTGACAGTTTTTAAGGTT 779
||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 753 ATCCTCTCGTGGAAAATCAACCTCGTCGATGTTCCAAAGACCGTGACTGTTTTTAAGGTT 812
Query 780 AATAAAACATTGGAACAAGGAGTTACTGATGTTCTCTACAAATGGCAGCTTGTCTCTAGC 839
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct 813 AACAAAACCTTGGAGCAAGGAGTTACTGATGTTCTCTACAAATGGCAGCTTGTGTCGAGC 872
Query 840 AAATTGCCTCGAGACCTTTTCTTGAGAGCAATGCCTCAAGTC-ATAAATGGCGCGGTACC 898
|||||||||| ||||||||||||||||||||||||| || | ||||||||| ||||||
Sbjct 873 AAATTGCCTCAAGACCTTTTCTTGAGAGCAATGCCT-AAACCGGTAAATGGCGTGGTACC 931
Query 899 TAGCGAGAAAACCATCGCGGCTGTGTTCTACGCTCAGTTTTTAGGCTCAGCAAGGAGGCT 958
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 932 TAGCGAGAAAACCATCGCAGTTGTGTTCTACGCTCAGTTTTTAGGCTCAGCAAGGAGGCT 991
Query 959 CATGGCGATTATGAACAAGAATTTGCCTGAATTAGGGCTAAAACGTGAAGATTGCTACGA 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 CATGGCGATTATGAACAAGAATTTGCCTGAATTAGGGCTAAAACGTGAAGATTGCTACGA 1051
Query 1019 AATGAGCTGGATTAATACGACAATGTTTTGGCAGAACTATCCTGTGGGAACATCGACAAG 1078
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1052 AATGAGCTGGATTAATACGACAACGTTTTGGCAGAACTATCCTGTGGGAACATCGACAAG 1111
Query 1079 CCTTCTATTGGCTAGACCATCGGATCC-GCCAGGAGCATTCTTCAAGAGTAAATCGGATT 1137
| || |||||| ||||||||||| ||| || ||||||||||| |||||||||||||||||
Sbjct 1112 CGTTTTATTGGATAGACCATCGGGTCCCGC-AGGAGCATTCTACAAGAGTAAATCGGATT 1170
Query 1138 ACGTCAAGAAACCAATCCCAAAAGAAGGAATGGAGAAGATCTGGAAAACAATGTTGAAGT 1197
||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||||||||
Sbjct 1171 ACGTCAAGAAACCGATCCCAAAGGAAGAAATGGAGAAGATCTGGAAAGCAATGTTGAAGT 1230
Query 1198 TCAACAATATGTGGATGCAATGGAACCCTTACGGCGGAGTGATGGACAAGATTCCGGCTG 1257
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1231 TCAACAATATGTGGATGCAATGGAACCCTTACGGTGGAGTGATGGACAAGATTCCTGCTG 1290
Query 1258 ATGCCACGGCTTTTCCTCATCGAAAAGGAAACTTGTTCAAGATTCAGTACTTTGCGTTAT 1317
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291 ATGCCACCGCGTTTCCTCATCGAAAAGGAAACTTGTTCAAGATTCAGTACTTTGCGTTAT 1350
Query 1318 GGACAGACGCAAACGCCACAGACGCTAATCTCGGTCTGATGAAAGAGATTTACGATGAGA 1377
|||||||||||||||||||| |||||||||| ||||| |||| ||| || ||| ||||||
Sbjct 1351 GGACAGACGCAAACGCCACATACGCTAATCTTGGTCTAATGAGAGATATATACCATGAGA 1410
Query 1378 TGGAGCCGTACGTGTCAAGCAACCCGAGAGAGGCGTTCTTGAATTACAGAGATATCGATG 1437
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1411 TGGAGCCGTACGTGTCAAGTAACCCTAGAGAGGCGTTCTTGAATTACAGAGATATCGATG 1470
Query 1438 TCGGAAGCAATATTAGTGGTAAAACCAATGTTGAAGAAGCTGCAGAGATCTATGGATCCA 1497
||||||||||| |||||| | |||||| ||||||||||| | ||||||||||||| |
Sbjct 1471 TCGGAAGCAATCCGAGTGGTGAGACCAATCTTGAAGAAGCT--A-AGATCTATGGATCGA 1527
Query 1498 GGTATTTCTTGGGGAACTTTAAGAGATTGATGGAAGTTAAAGCTAAGTATGACCCTCAGG 1557
||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||
Sbjct 1528 AGTATTTCTTGGGGAATTTTAAGAGATTGATGGAAGTTAAAGCAAAGTATGATCCTGAGA 1587
Query 1558 ATTTCTTTAGATTCGAACAGAGTATTCCTCCTGTTCGTGCAATGTAACTCTT 1609
||||||||||||||||||| ||||||||||||| | ||||||||||||||||
Sbjct 1588 ATTTCTTTAGATTCGAACAAAGTATTCCTCCTGCTAGTGCAATGTAACTCTT 1639
> AT1G26390.1 | Symbols: | FAD-binding Berberine family protein
| chr1:9130017-9131779 REVERSE LENGTH=1763
Length=1763
Score = 1081 bits (585), Expect = 0.0
Identities = 1280/1606 (80%), Gaps = 85/1606 (5%)
Strand=Plus/Plus
Query 42 CTTGTTCTTCTTGTTTCGGTTTCAGATGCA-AATGAAACGAAACC-AAATACTGAAAACT 99
||||| ||||| |||||||||| || ||| | | ||| ||||| |||| || | |||
Sbjct 51 CTTGTACTTCTGGTTTCGGTTTTGGAAGCAGCA-GTAACAAAACCAAAAT-TTGGAGACT 108
Query 100 TCCTCCGATGCCTTCG-TAATCGGACCAGTCCGAAGAATCCGATCACTGAAGCCCTCT-A 157
|| || | |||||||| | |||| || |||||| ||||||| ||||| || ||| |||
Sbjct 109 TCATCGGGTGCCTTCGCT-ATCGTACTAGTCCGGAGAATCCAATCACCGATGCCATCTCC 167
Query 158 TAC-TC-ATGAGAACTCCACCTTCGTGTCATCTTACGTGTCCTACACGAAAAATAAACGG 215
| | | || | | | |||||||| |||| ||||||||||| ||||| ||||| ||| ||
Sbjct 168 TTCGCCGATAACACCACCACCTTCTTGTCTTCTTACGTGTCATACACTAAAAACAAAAGG 227
Query 216 TACTCAAACCCTAACGACACAAAACTAATCGCCATTGTTGCTGCAAAACATGAATCTCAT 275
| ||| | |||||| | | ||| ||| | ||||| || || |||||||||| |||||||
Sbjct 228 TTCTCGACCCCTAATTATAGAAAGCTACTAGCCATCGTGGCCGCAAAACATGTATCTCAT 287
Query 276 GTTCAGGCAACCGTGGTCTGCGCAAAGGT-CAATGG-AGTCCAGATCCGTATCCGAAGCG 333
|||||||| || |||||||||||||| || |||||| | ||||| ||||||| |||||||
Sbjct 288 GTTCAGGCCACGGTGGTCTGCGCAAA-GTCCAATGGTA-TCCAGCTCCGTATACGAAGCG 345
Query 334 GCGGTCACGACTATGAGGGACTTTCATATATCTCCTCTGTTCCGTTTGTTATTCTCGACA 393
||||||| |||||||| || ||||| || || || ||||| || |||||||||||||| |
Sbjct 346 GCGGTCATGACTATGAAGGCCTTTCTTACATGTCGTCTGTGCCATTTGTTATTCTCGATA 405
Query 394 TGCACGATCTCCGGTCTATAACCATTGACGTGTTC-AGAAAGCAAGCTTGGGTTGATGCA 452
|| || || | ||||||| || |||||||| || || ||| |||| ||| || | ||
Sbjct 406 TGTACAATTTGAGGTCTATTACTGTTGACGTG-TCAAGCAAGAAAGCCTGGATTCAAGCT 464
Query 453 GGTGCGACCATGGGAGAGCTCTACACCAAAATCG-C-A-GAGGCT-AGCAAAACGCTAGC 508
||||||||| ||||||||||||||| | ||| || | | || | | ||| |||| |||||
Sbjct 465 GGTGCGACCTTGGGAGAGCTCTACA-C-AAA-CGTCAATGACG-TAAGCCAAACACTAGC 520
Query 509 GTTT-GCGGGTGGCGTTTGTC-CTACATTAGGGGCGGGAGGACACATCAGCGGCGGAGGA 566
||| ||| ||||||||| | |||| |||| || || || ||||| || || |||||
Sbjct 521 -TTTCCCGGCTGGCGTTTG-CGCTACCGTAGGAGCTGGTGGGCACATAAGTGGTGGAGGG 578
Query 567 TACGGAAATTTGATTAGAAAGTACGGAATTTCAGTCGATCATGTCGTTGATGCTCGAATA 626
|| |||||| | || ||||| |||||||| | || ||||||||| ||||||||| ||||
Sbjct 579 TATGGAAATCTAATGAGAAAATACGGAATCACTGTGGATCATGTCATTGATGCTCAAATA 638
Query 627 GTTGATGTCAACGGCAATATCTTGACA-GGAGCTACCTTGGGACG-TGATCTATTGTGGG 684
|||||||||||||||| |||||| | |||||||| ||||| | ||||| || ||||
Sbjct 639 ATTGATGTCAACGGCAAGCTCTTGA-ATCGAGCTACCATGGGA-GAAGATCTCTTTTGGG 696
Query 685 CTATTCGAGGCGGTGGGGGCGCAAGCTTCGGAGTTATCCTTTCCTGGAAAATCAACCTCG 744
| || || |||||||| || | || || ||||||||||| || ||||||||||||||||
Sbjct 697 CAATCCGTGGCGGTGGCGGTGGGAGTTTTGGAGTTATCCTCTCTTGGAAAATCAACCTCG 756
Query 745 TCGATGTTCCAAAGACCGTGACAGTTTTTAAGGTTAATAAAACATTGGAACAAGGAGTTA 804
||||||||||||||| ||||||||| ||||||||||| |||||| |||||||||||| |
Sbjct 757 TCGATGTTCCAAAGATCGTGACAGTATTTAAGGTTAACAAAACACTGGAACAAGGAGGCA 816
Query 805 CTGATGTTCTCTACAAATGGCAGCTTGTCTCTAGCAAATTGCCTCGAGAC-CTTTTCTTG 863
|||||||||||||||| |||||||||||| |||||||||| ||| || | |||||| ||
Sbjct 817 CTGATGTTCTCTACAAGTGGCAGCTTGTCGCTAGCAAATTCCCT-GAAAGTCTTTTCGTG 875
Query 864 AGAGCAATGCCTCAAGTCAT-AAATGGCGCGGTAC-CTAGCGAGAAAACCATCGCGGCTG 921
|||||||||||||| || | |||||| | || | | |||| ||||||| | | ||
Sbjct 876 AGAGCAATGCCTCAGGT-AGCAAATGGAACAAAACGCGGG-GAGAGAACCATCACTGTTG 933
Query 922 TGTTCTACGCTCAGTTTTTAGGCTCAGCAAG-GA-G-GCTCATGGCGATTATGAAC-AAG 977
| ||||| |||||||| || || || | || || | ||| ||||| || |||||| ||
Sbjct 934 TATTCTATGCTCAGTTCTTGGG-TC-G-AACCGATGCGCTGATGGCTATAATGAACCAA- 989
Query 978 AATTTGCCTGAATTAGGGCTAAAACGTGAAGATTG-CTACGAAATGAGCTGGATTAA-TA 1035
|| | ||||||| |||||||||||| ||||||||| | | |||||||||||| |||| |
Sbjct 990 AACTGGCCTGAACTAGGGCTAAAACATGAAGATTGTCAA-GAAATGAGCTGGCTTAACT- 1047
Query 1036 CGACAATGTTTTGG-CAGAACTATCCTGTGGGAACATCGACAAGCCTTCTAT-TGGCTAG 1093
| || |||||||| |||| ||||| | || || |||| ||| |||| | | | |||
Sbjct 1048 CAACGTTGTTTTGGGCAGAT-TATCCAGCCGGTACCCCGACGAGCATTCT-TCTAGATAG 1105
Query 1094 ACCATCG-GATCCGCCAGGAGCATTCTT-CAAGAGTAAATCGGATTACGTCAAGAAACCA 1151
||| ||| | ||| ||||| ||| || ||| |||||||| ||||| ||||| ||||||
Sbjct 1106 ACCGTCGAG-TCC---AGGAG-ATTTTTTCAAAAGTAAATCAGATTATGTCAAAAAACCA 1160
Query 1152 ATCCCAAAAGAAGGAATGGAGAAGATCTGGAAAACAATGTTGAAGTTCAACAATA-T--- 1207
||||| ||||||||| |||||||| | ||||| ||||||||||| |||||||||| |
Sbjct 1161 ATCCCCAAAGAAGGATTGGAGAAGCTTTGGAAGACAATGTTGAAATTCAACAATAATATT 1220
Query 1208 GTG-G-ATGCAATGGAACCCTTACGGCGGAGTGATGGACAAGATTCCGGCTGATG-CCAC 1264
||| | ||||||| ||||||||||| |||||||||||| |||||| || | | ||||
Sbjct 1221 GTGTGGATGCAATTCAACCCTTACGGTGGAGTGATGGACCGGATTCCAGCA-ACGGCCAC 1279
Query 1265 GGCTTTTCCTCATC-GAAAAGGAAACTTGTTCAAGATTCAGTACTTTGCGTTATGGAC-A 1322
|| |||||||| | ||||||||||||||||||||||||| |||||| || |||| |
Sbjct 1280 AGCGTTTCCTCA-CAGAAAAGGAAACTTGTTCAAGATTCAATACTTTACGACATGGTTTA 1338
Query 1323 GACGCAAACGCCACA--GACGCTAATCTCG-GTCTGATGAAAGAGATTTACGATGA-GAT 1378
|||||||||||||| || | || || | ||| ||||| ||| ||||||| | | |
Sbjct 1339 -ACGCAAACGCCACAATGA-G-TAGCCT-GAGTCAAATGAAGGAGCTTTACGAGGTTGCT 1394
Query 1379 GGAGCCGTACGTGTCAAGCAACCCGAGAGAGGCGTTCTTGAATTACAGAGATATCGATGT 1438
| | |||||||||||||| |||||||||||||| || || ||||||||||||||||||||
Sbjct 1395 GAA-CCGTACGTGTCAAGTAACCCGAGAGAGGCCTTTTTTAATTACAGAGATATCGATGT 1453
Query 1439 CGGAAGCAATATTAGTGGTAAAACCAATGTTGAAGAAGCTGCAGAGATCTATGGATCCAG 1498
||||||||| |||||| | || || || || |||||| | |||||||||||||||
Sbjct 1454 TGGAAGCAATCCGAGTGGTGAGACAAACGTGGATGAAGCT--A-AGATCTATGGATCCAA 1510
Query 1499 GTATTTCTTGGGGAACTTT-AAGAGATTGATGGAAGTTAAAGCTAAGTATGACCCTCAGG 1557
||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||| |
Sbjct 1511 GTATTTCTTGGGGAA-TTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGATA 1569
Query 1558 ATTTCTTTAGATTCGAACAGAGTATTCCTCCTGTTCGTGCAATGTA 1603
||||||| | | ||||||||| |||||||| ||||||| ||||||
Sbjct 1570 ATTTCTTCAAAAACGAACAGAGCATTCCTCCGGTTCGTGTAATGTA 1615
> AT1G26420.1 | Symbols: | FAD-binding Berberine family protein
| chr1:9141567-9143304 REVERSE LENGTH=1738
Length=1738
Score = 1048 bits (567), Expect = 0.0
Identities = 1288/1627 (79%), Gaps = 85/1627 (5%)
Strand=Plus/Plus
Query 15 ATGAAAGAAGTA-GTT-TATGTTCTGCTACTTGTTCTTCTT-GTTTCGGTTTCAGATGCA 71
|||||||||| | || ||| || || | |||| |||| || |||||||||||||| |||
Sbjct 1 ATGAAAGAAGCACTTTCTATTTTGTG-T-CTTGCTCTT-TTGGTTTCGGTTTCAGAAGCA 57
Query 72 -AATGAAACGAAACCAAATACTGAAAACTTCCTCCG-ATGCCTTCG-TAATCGGACCAGT 128
|| | ||| ||||||||| ||||||| ||| | | ||||||||| | ||||||| |||
Sbjct 58 GAA-GTAACAAAACCAAATTCTGAAAATTTCAT-TGAATGCCTTCGCT-ATCGGACAAGT 114
Query 129 CCGAAGAATCCGATCACTGAAGCC--CTCTA-TACTC-ATGAGAACTCCACCTTCGTGTC 184
|| ||||||| ||||| || || ||| | | | | || | | | |||||||| ||||
Sbjct 115 TCGGAGAATCCAATCACCGATTCCATCTCCATTGC-CGATAACACCACCACCTTCTTGTC 173
Query 185 ATCTTACGTGTCCTACACGAAAAATAA-ACGGTACTCAAACCCTAACGACACAAAACTAA 243
|||||| |||||||||||||||| || | ||||||| | ||||||| || |||| ||
Sbjct 174 TTCTTACTTGTCCTACACGAAAAACAAGA-GGTACTCGAGCCCTAACTTCAAAAAATTAC 232
Query 244 TCGCCATTGTTGCTGCAAAACATGAATCTCATGTTCAGGCAACCGTGGTCTGCGCAAAGG 303
| ||||| || || || ||||||| |||||||||||||||||| |||||||||||||||
Sbjct 233 TAGCCATCGTAGCGGCGAAACATGTATCTCATGTTCAGGCAACAGTGGTCTGCGCAAAGA 292
Query 304 TCAATGG-AGTCCAGA-TCCGTATCCGAAGCGGCGGTCACGA-CTATGAGGGACTTTCAT 360
|||||| | | || | | |||||||||||||||||||| || || || || ||||| |
Sbjct 293 CCAATGGTA-TACA-ACTGCGTATCCGAAGCGGCGGTCATGACCT-CGAAGGCCTTTCTT 349
Query 361 ATATCTCCTCTGTTCCGTTTGTTATTCTCGACATGCACGATCTCCGGTCTATAACCATTG 420
| | || ||||| || ||||| |||||||| ||| | ||||| | ||||| || ||
Sbjct 350 ACAGGTCGTCTGTGCCATTTGTCATTCTCGATATGTTCAATCTCAGATCTATTACTGTTA 409
Query 421 ACGTGTTCAGAAAGCAAGCTTGGGTTGATGCAGGTGCGACCATGGGAGAGCTCTACACCA 480
|||| || || ||| |||| |||||| | || ||||| ||| |||||||||| ||| |
Sbjct 410 ACGTATTGAGCAAGAAAGCATGGGTTCAAGCTGGTGCAACCTTGGGAGAGCTATAC-GTA 468
Query 481 AA-A-TCGCAGAGGCTAGCAAAACGCTAGCGTTTGCGGGTGGCGTTTGTCCTACAT-TAG 537
|| | | | ||||| ||| |||||||||| ||| | | ||||||||| ||||| | |||
Sbjct 469 AAGATTAAC-GAGGCAAGCCAAACGCTAGCATTTCCAGCTGGCGTTTGCCCTAC-TGTAG 526
Query 538 GGGCGGGAGGACACATCAGCGGCGGAGGATACGGAAATTTGATTAGAAAGTACGGAATTT 597
| | ||||| ||||| ||||| ||||| || |||||| |||| ||||| | ||||||
Sbjct 527 GAGTAGGAGGGCACATAAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAATCA 586
Query 598 CAGTCGATCATGTC-GTTGATGCTCGAA-TAGTTGATGTCAACGGCAATATCTTGACA-G 654
|||| ||||||||| | |||||||| || || |||||||||||||||| |||||| |
Sbjct 587 CAGTGGATCATGTCAG-TGATGCTC-AATTAATTGATGTCAACGGCAAGCTCTTGA-ATC 643
Query 655 GAGCTACCTTGGGACG-TGATCTATTGTGGGCTATTCGAGGCGGTGGGGGCGCAAGCTTC 713
|||||| | ||||| | ||||| || ||||| || || |||||||| || || || ||
Sbjct 644 GAGCTAGCATGGGA-GAAGATCTCTTTTGGGCCATCCGTGGCGGTGGTGGAGCGAGTTTT 702
Query 714 GGAGTTATCCTTTCCTGGAAAATCAACCTCGTCGATGTTCCAAAGA-CCGTGACAGTTTT 772
||||||||||| || |||||||||||||||||| | |||||||||| || ||||||| ||
Sbjct 703 GGAGTTATCCTCTCTTGGAAAATCAACCTCGTCAAGGTTCCAAAGATCC-TGACAGTGTT 761
Query 773 TAAGGTTAATAAAACATTGGAACAAGGAGTTACTGATGTTCTCTACAAATGGCAGCTTGT 832
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 762 TAAGGTTAATAAAACATTGGAACAAGGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGT 821
Query 833 CTCTAGCAAATTGCCTCGA-GACCTTTTCTTGAGAGCAATG-CCTCA-AGTCATAAATGG 889
| ||| ||| || ||| || || |||||| |||||||| || ||||| | ||||||||||
Sbjct 822 CGCTACCAAGTTCCCT-GAAGATCTTTTCATGAGAGCA-TGGCCTCAGA-TCATAAATGG 878
Query 890 CGCGGTACCTAGCGAGAAAACCATCGCGGCTGTGTTCTACGCTCAGTTTTTAGGCTC-AG 948
|| | || | |||| | ||||||||| | ||| ||||| |||||||| || || || ||
Sbjct 879 AGCAGAACGTGGCGATAGAACCATCGCAGTTGTATTCTATGCTCAGTTCTTGGG-TCCAG 937
Query 949 CA-AGGAGGCTCATGGCGATTATGAACAAGAATTTGCCTGAATTAGGGCTAAAACGTGAA 1007
| | || || ||||||| |||||| || ||||||||||||||||||| |||||||
Sbjct 938 CTGATAAG-CTGTTGGCGATAATGAACCAGCGCTTGCCTGAATTAGGGCTAAGACGTGAA 996
Query 1008 GATTG-CTACGAAATGAGCTGGATTAATACGACAATGTTTTGG-CAGAACTATCCTGTGG 1065
||||| | |||||||||||||| |||| ||||| |||||||| | || || |||| |
Sbjct 997 GATTGTC-ACGAAATGAGCTGGTTTAACACGACGTTGTTTTGGGCCGAT-TACCCTGCAG 1054
Query 1066 GAACATCGACA-AGCCTTCTAT-TGGCTAGACCATCGGATCCGCCAGGAGCATTCTTCAA 1123
| ||| ||| | ||| |||| | | | ||| ||| || |||| |||| ||||| ||
Sbjct 1055 GTACACCGA-AGAGCGTTCT-TCTAGATAGGCCAACGAATCC---AGGA---TTCTTTAA 1106
Query 1124 GAGTAAATCGGATTACGTCAAGAAACCAATCCCAAAAGAAGGAATGGAGAAGATCTGGAA 1183
||| ||||| ||||| ||||| ||||||||||||||||||||| | |||||| | |||||
Sbjct 1107 GAGCAAATCAGATTATGTCAAAAAACCAATCCCAAAAGAAGGATTAGAGAAGCTTTGGAA 1166
Query 1184 AACAATGTTGAAGTTCAACAATAT-GTG-G-ATGCAATGGAACCCTTACGGCGGAGTGAT 1240
|||||||| |||||||||||||| ||| | ||||||| |||||||| || ||||||||
Sbjct 1167 GACAATGTTTAAGTTCAACAATATTGTGTGGATGCAATTCAACCCTTATGGTGGAGTGAT 1226
Query 1241 GGACAAGATTCCGGCTGAT-GCCACGGCTTTTCCTCATCGAAAAGGAAACTTGTTCAAGA 1299
|||| |||||||| | || || || || ||||||||||| ||||||||| ||||||||
Sbjct 1227 GGACCAGATTCCGTC-GACCGCTACAGCATTTCCTCATCGTAAAGGAAACATGTTCAAGG 1285
Query 1300 TTCAGTACTTTGCGTTATGGACAGAC-GCAAACGCCACAGACGCTAATC-TCGGTCTGAT 1357
|||| |||| | | |||| | | |||||||||||||| | | | | | || ||||
Sbjct 1286 TTCAATACTCTACAACATGGTTGG-CTGCAAACGCCACAGA-GATTAGCCTAAGTATGAT 1343
Query 1358 GAAAGAGATTTACGATGAGATG-G-AGCCGTACGTGTCAAGCAACCCGAGAGAGGCGTTC 1415
||| ||| ||||| | | | || | | |||||||||||||| |||||||||||||| |||
Sbjct 1344 GAAGGAGCTTTACAA-G-GTTGCGGAACCGTACGTGTCAAGTAACCCGAGAGAGGCATTC 1401
Query 1416 TTGAATTACAGAGATATCGATGTCGGAAGCAATATTAGTGGTAAAACCAATGTTGAAGAA 1475
|| ||||||||||| |||||| | || || ||| |||| | | || ||||| || ||
Sbjct 1402 TTTAATTACAGAGACATCGATATTGGCAGTAATCCGAGTGATGAGACAAATGTGGATGA- 1460
Query 1476 GCTGCAGAGATCTATGGATCCAGGTATTTCTTGGGGAACTTT-AAGAGATTGATGGAAGT 1534
| ||| |||||||||||| || ||||||||||||||| ||| |||||| | ||| ||||
Sbjct 1461 G--GCAAAGATCTATGGATACAAGTATTTCTTGGGGAA-TTTGAAGAGACTCATGCAAGT 1517
Query 1535 TAAAGCTAAGTATGACCCTCAGGATTTCTTTA-GATTCGAACAGAGTATTCCTCCTGTTC 1593
|||||||| ||||| ||| || ||||||| | || ||| |||||||||||||||||||
Sbjct 1518 CAAAGCTAAATATGATCCTGAGAATTTCTTCAAGAA-CGAGCAGAGTATTCCTCCTGTTC 1576
Query 1594 GTGCAAT 1600
||| |||
Sbjct 1577 GTGTAAT 1583
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80320872000
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5