BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492871 Length=1415 Score E Sequences producing significant alignments: (Bits) Value AT4G20020.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1299 0.0 > AT4G20020.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast hits to 16023 proteins in 1033 species: Archae - 4; Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants - 3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI BLink). | chr4:10844402-10846147 REVERSE LENGTH=1353 Length=1353 Score = 1299 bits (703), Expect = 0.0 Identities = 811/864 (94%), Gaps = 4/864 (0%) Strand=Plus/Plus Query 22 CGATGGCTATGTTATCTCACCGTATCAGACGAGCTTTACTCACGGCGACTTCCTATGTTA 81 ||||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||| Sbjct 61 CGATGGCTATGATATCTCACCGTCTCCGACGAGCTTTACTCACTGCGACTTCCTATGTTA 120 Query 82 ACCGATCAATCGGCACTTCCG-TTTCACCAGCGTCCGATTTCCCTTCTGTGTCGGCGGCG 140 |||||||||| || ||| || | |||||||||| |||||||||||||||||||||||| Sbjct 121 ACCGATCAATTAGCTCTT-CGATCACACCAGCGTCTGATTTCCCTTCTGTGTCGGCGGCG 179 Query 141 GTGTTACAGAGATCCGTTTTAGGGCGTTCGACGGAAGTAGCTACTCGAGCTCCGGCGAGA 200 |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 180 GTGTTAAAGAGATCCGTTATAGGGCGTTCGACGGAAGTAGCTACTCGAGCACCGGCGAGA 239 Query 201 CTGTATTCGACGAGGCAGTACAAGCTTTACAAAGAAGGTGATGAGATCACGGAAGACACT 260 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CTGTTTTCAACGAGGCAGTACAAGCTTTACAAAGAAGGTGATGAGATCACGGAAGACACT 299 Query 261 GTGTTGTTCGAAGGGTGTGATTATAATCATTGGCTTATCACTATGGATTTTTCCAAAGAG 320 |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 300 GTGTTGTTCGAAGGATGTGATTATAATCACTGGCTTATCACTATGGATTTCTCCAAAGAG 359 Query 321 GAAACTCCCAAGTCTCCAGAGGAAATGGTCTCTGCCTATGAAGAAACTTGTGCCCAAGGA 380 |||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||||||||| Sbjct 360 GAAACTCCTAAGTCTCCAGAAGAAATGGTCGCTGCTTATGAAGAAACTTGCGCCCAAGGA 419 Query 381 CTTGGTATCAGTGTGGAAGAGGCAAAGAAAAGAATGTATGCTTGTAGCACAACTACTTAC 440 ||||| ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct 420 CTTGGCATCAGCGTGGAAGAGGCTAAGCAAAGGATGTATGCTTGTAGCACAACTACTTAC 479 Query 441 CAAGGTTTTCAAGCAATCATGACTGAGCAAGAATCAGAAAAGTTCAAGGATCTGCCCGGA 500 ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 480 CAAGGATTTCAAGCAATCATGACTGAACAAGAATCAGAAAAGTTCAAGGATCTACCCGGA 539 Query 501 GTTGTCTTCATATTACCAGATTCCTACATTGATCCCCAGAACAAAGAGTATGGAGGAGAC 560 || || ||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 GTGGTTTTCATCTTGCCAGATTCCTACATTGATCCCCAGAACAAAGAGTATGGAGGAGAT 599 Query 561 AAATACGAGAATGGAGTGATCACACACAGGCCACCACCGATTCAGAGTGGCAGACCAAGA 620 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 600 AAATACGAGAATGGAGTGATAACACACAGGCCACCACCGATTCAGAGTGGCAGAGCAAGA 659 Query 621 CCCCGTCCTAGATTTGACCGTTCAGGAGGAGGAGGTGGTGGTCCCCAAAACTTCCAAAGA 680 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 660 CCTCGTCCTAGATTTGACCGTTCAGGAGGAGGAAGTGGTGGTCCCCAAAACTTCCAAAGA 719 Query 681 AACACACAGTATGGTCAGCAACCACCAATGCAAGGTGGTGGAGGGAGCTTTGGTCCTCAA 740 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 720 AACACACAGTATGGTCAGCAACCACCAATGCAAGGTGGTGGAGGGAGCTATGGTCCTCAA 779 Query 741 CAGGGCTATGGCTCTCCAGGACAGGGTCAGGGAATTCAAGGGCCTCCACCATTTCAAGGA 800 |||||||||| | |||||||||| |||||||||| ||||| ||||||||||||||||||| Sbjct 780 CAGGGCTATGCCACTCCAGGACAAGGTCAGGGAACTCAAGCGCCTCCACCATTTCAAGGA 839 Query 801 GGTTACAACCAAGGCCC-AGGATCTCCACCGCCTCCATATCAGGCGGGTTACAATCAAGG 859 ||||| ||||||||||| || ||||||||| |||||||||||||| |||||||||||||| Sbjct 840 GGTTATAACCAAGGCCCGAG-ATCTCCACCACCTCCATATCAGGCAGGTTACAATCAAGG 898 Query 860 CCAGGGATCTCCAGTGCCTCCATA 883 |||||||||||||||||||||||| Sbjct 899 CCAGGGATCTCCAGTGCCTCCATA 922 Score = 538 bits (291), Expect = 5e-152 Identities = 357/389 (92%), Gaps = 4/389 (1%) Strand=Plus/Plus Query 789 CCATTTCAAGG-AGGTTACAACCAAGGCCCA-GGATCTCCACCGCCTCCATATCAGGCGG 846 |||| || ||| ||||||||| ||||| ||| ||||||||| ||||||||||||||| | Sbjct 873 CCATATC-AGGCAGGTTACAATCAAGG-CCAGGGATCTCCAGTGCCTCCATATCAGGCAG 930 Query 847 GTTACAATCAAGGCCAGGGATCTCCAGTGCCTCCATACCAAGGAACACAAAGCAGTTACG 906 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 931 GTTACAATCAAGTCCAGGGATCTCCAGTGCCTCCATACCAAGGAACACAAAGCAGTTACG 990 Query 907 GTCAAGGTGGACCTGGGAACTATAGCCAAGGGCCACAAGGAGGTTACAACCAAGGAGGAC 966 ||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 991 GTCAAGGTGGATCTGGGAACTATAGTCAAGGGCCACAAGGTGGTTACAACCAAGGAGGAC 1050 Query 967 CTAGGAATTACAGTCCACAGGGAGCTGGCAACTTCGGTCCTGCACCGGGAGCTGGAAACT 1026 |||||||||||| ||||||||||||||| ||||| ||||||||| | ||||||||||||| Sbjct 1051 CTAGGAATTACAATCCACAGGGAGCTGGAAACTTTGGTCCTGCATCTGGAGCTGGAAACT 1110 Query 1027 TTGGTCCTGCACCGGGAGCTGGAAATCCCGGTTATGGTCAAGGATATTCTGGACCTGGAC 1086 | ||||||||||| |||||||||||||| || |||||||| || ||||||||||| |||| Sbjct 1111 TAGGTCCTGCACCTGGAGCTGGAAATCCTGGCTATGGTCAGGGGTATTCTGGACCAGGAC 1170 Query 1087 AAGAGCAGAATCAAACATTTCCACAGACAAATCAGAGGAATCCAGACTGGAACAACAATA 1146 ||||||||||||| ||||| |||||| || |||||||||||| ||||||||||||||||| Sbjct 1171 AAGAGCAGAATCAGACATTCCCACAGGCAGATCAGAGGAATCGAGACTGGAACAACAATA 1230 Query 1147 ATCCAGCTGGCCAGCCTGGGTCTGACCAA 1175 ||||||| |||||||| |||||||||||| Sbjct 1231 ATCCAGCAGGCCAGCCCGGGTCTGACCAA 1259 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69728557005 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5