BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492931
Length=1425
Score E
Sequences producing significant alignments: (Bits) Value
AT4G19185.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 2222 0.0
AT5G45370.2 | Symbols: | nodulin MtN21 /EamA-like transporter ... 826 0.0
> AT4G19185.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr4:10489042-10491671 REVERSE LENGTH=1539
Length=1539
Score = 2222 bits (1203), Expect = 0.0
Identities = 1331/1391 (96%), Gaps = 15/1391 (1%)
Strand=Plus/Plus
Query 1 GAAATTTTGCACAGAACCTATAGAAAAGACTCGACAAATAGAAGAAGCAGATTCGTTGCT 60
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 40 GAAAATTTGCACAGAACCTATAG----GACTCGACAAATAGAAGAAGCAGATTCGTTGCT 95
Query 61 GACGAAGTAAAGGATCTCACTTTTTTGGTCTTCGCTTCATCTAAATAACTTAT-A--ACA 117
|||||||||||||||| |||||||| ||||| |||| | ||||||||||| | |||
Sbjct 96 AACGAAGTAAAGGATCTTACTTTTTTAGTCTTTGCTT--TAGAAATAACTTATAACTACA 153
Query 118 AGTCAGAGACGGGCTGAGTAAATCGGAAAGATGACGGCGCCGATGATCCTGAGCGGAGGC 177
||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 154 AGTCAGAGAGGGGCCGAGTAAATCGGAAAGATGACGGCGCCGATGATCCTGACCGGAAGT 213
Query 178 GGATCGGCAGCGGAGAGAGACGCTCGGATGGCGCACACTGCCATGGCGTTTGTTCAGCTC 237
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 214 GGATCGGCGGCGGAGAGAGACGCTCGGATGGCGCACACTGCTATGGCGTTTGTTCAGCTC 273
Query 238 TTTAATGGCGGATACCATGTGATTACAAAAGTAGCTCTCAACGTTGGAGTCAACCAGCTT 297
|||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct 274 TTTAATGGTGGATACCATGTGATTACTAAAGTAGCTCTTAATGTTGGAGTCAACCAGCTT 333
Query 298 GTCTTCTGTGTATGCCGTGATCTTCTTGCTCTCTCTATTCTCGCTCCTCTTGCTTACTTC 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 334 GTCTTCTGTGTATGCCGTGATCTTCTTGCTCTCTCTATTCTCGCTCCTCTTGCTTACTTC 393
Query 358 CGCGAAAGCAAGATCAGAACTCCAATGAATAAAAGCCTTCTCTTGTCATTCTTCTTTCTG 417
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 394 CGCGAAAGAAAGATCAGAACTCCAATGAATAAAAGCCTTCTCTTGTCATTCTTCTTTCTG 453
Query 418 GGCTTAGCAGGGGTATTTGGGAACCAATTGTTATTTCTCATCGGTCTTACATACACAAAT 477
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 454 GGCTTAGCAGGGGTATTTGGGAACCAGTTGTTATTTCTTATCGGTCTTACATACACAAAT 513
Query 478 CCAACTTATGCTGCTGCCATTCAACCATCCATCCCGGTCTTTACCTTTCTCTTGGCTGTA 537
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 514 CCCACTTATGCTGCTGCCATTCAACCATCCATCCCGGTCTTCACCTTTCTCTTGGCTGTC 573
Query 538 ATGATGGGTACAGAAAGAGTGAATTTGTTGAGAATCGAAGGTCAAACTAAGGTTGGAGGC 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 ATGATGGGTACAGAAAGAGTGAATTTGTTGAGAATCGAAGGTCAAACTAAGGTTGGAGGC 633
Query 598 ACACTTGTGTGTGTTATGGGTGCCGTCTTTATGGTTCTATTTCGAGGTCCAGCCTTGTTA 657
||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||||
Sbjct 634 ACACTTGTGTGTGTTATGGGTGCTGTCTTCATGGTTGTATTTCGAGGTCCGGCCTTGTTA 693
Query 658 GGAGATAAAGATGCAGACTTTGCGATGAACAATGAAATCAGTGCTAAAGGTCAACCTGAG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 694 GGAGATAAAGATGCAGACTTTGCGATGAACAATGAAATCAGTGCTAAAGGTCAACCTGAG 753
Query 718 CCTACTGGGTGGTTAGTCTCTGGTTTTCTCGATCTTGGATTTGAGAC-ATGGCACATTGG 776
|||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 754 CCTACTGGTTGGTTAGTCTCTGGTTTTCTCGATCTTGGATTTGAG-CAATGGCACATTGG 812
Query 777 AGTTTTATGCTTGATTGGAAACTGCATGTGTATGGCTACTTTTCTTGCCATTCAGGCGCC 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 AGTTTTATGCTTGATTGGAAACTGCATGTGTATGGCTACTTTTCTTGCCATTCAGGCGCC 872
Query 837 ACTTTTGAAGAAGTATCCGGCAAATCTTTCTGTTGCTGCATTGTCATACTTCTTTGGTAC 896
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 873 ACTTTTGAAGAAGTATCCGGCAAATCTTTCTGTTGCTGCATTATCATACTTCTTTGGCAC 932
Query 897 AGTACTAATGTGCACAACAGCTTTCTTTATGGTAAAGGAGCCATTGGATTGGAGGCTAAC 956
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 933 AGTACTAATGTGCACAACAGCTTTCTTTATGGTAAAGGAGCCATTGGATTGGAAGCTAAC 992
Query 957 ACAATCTGAGGTTCTTGCAGTTATATATGCAGGAGTTATCGCGTCAGCACTAAACTATGG 1016
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 993 ACAATCTGAGGTTCTTGCAGTTATATATGCAGGAGTTATCGCATCAGCACTAAACTATGG 1052
Query 1017 ACTCTTGACTTGGTCCAATAAGATTATTGGTCCTGCCTTGGTTGCTCTCTACAATCCTCT 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1053 ACTCTTGACTTGGTCCAATAAGATTATTGGTCCTGCCTTGGTTGCTCTCTACAATCCTCT 1112
Query 1077 TCAGCCTGCTGCATCAGCGTTCCTATCGAGAATCTTTCTCGGTAGCCCTATTTATCTCGG 1136
||| || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1113 TCAACCCGCTGCATCAGCTTTCCTATCGAGAATCTTTCTCGGTAGCCCCATTTATCTCGG 1172
Query 1137 AAGTGTTGTGGGTGGATTCTTCATCATTCTAGGACTCTATATGGTCACTTGGGCATCATT 1196
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1173 AAGCGTTGTGGGTGGATTCTTCATCATTCTAGGACTCTATATGGTCACTTGGGCATCGTT 1232
Query 1197 TAGAGAGCGAAAAACAGCGGTTTCCGGGATTGGGATTGCGTCTCATGGTCTAAAAACCTC 1256
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1233 TAGAGAGCGAAAAACAGCGGTTTCCGGGATTGGGATTGCGCCCCATGGTCTAAAAACCTC 1292
Query 1257 AGAGCCTCTGATATTTAATGGGACAGTTAACAGACTAGGACAGTTGTTTTCTGGATTACC 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293 AGAGCCTCTGATATTTAATGGGACAGTTAACAGACTAGGACAGTTGTTTTCTGGATTACC 1352
Query 1317 CAGTTCCTCTGTGAAATCTGCAGACTAAAGA-A-ACCAAAAGAAGTTAAGATTGAGACCA 1374
||||||||||||||||||||||||||||| | | ||||||| | ||||||||| |||| |
Sbjct 1353 CAGTTCCTCTGTGAAATCTGCAGACTAAAAAGATACCAAAA-A-GTTAAGATTCAGACGA 1410
Query 1375 GAACCCATTTT 1385
|| ||||||||
Sbjct 1411 GATCCCATTTT 1421
Score = 75.0 bits (40), Expect = 2e-12
Identities = 42/43 (98%), Gaps = 0/43 (0%)
Strand=Plus/Plus
Query 1383 TTTTTGTTAACTTTCATCTCTTATTAATATCTTCTTTGATTAC 1425
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1436 TTTTTGTTAACTTTCATCTCTTATTAATATCTTCTTCGATTAC 1478
> AT5G45370.2 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr5:18388291-18390420 FORWARD LENGTH=1404
Length=1404
Score = 826 bits (447), Expect = 0.0
Identities = 887/1094 (81%), Gaps = 51/1094 (5%)
Strand=Plus/Plus
Query 143 GAAAGATGACGGCGCCGATGATCCTGAGCGGAGGCGGATCGGCAG-CGGAGAGAGACGCT 201
|||| ||| | || ||| |||||| | ||| ||| ||| || | |||||||||| |
Sbjct 116 GAAAAATGGCAGCTCCGGCGATCCTAAACGGCGGC-GAT--GC-GACGGAGAGAGAAACA 171
Query 202 CGGATGGCGCACACTGCCATGGCGTTTGTTCAGCTCTTTAATGGCGGATACCATGTGATT 261
|| ||||| ||| |||| ||| | || |||||| || | ||||| |||||||||||| ||
Sbjct 172 CGAATGGCTCACTCTGCAATGACATTGGTTCAGGTCATAAATGGAGGATACCATGTGGTT 231
Query 262 ACAAAAGTAGCTCTCAACGTTGGAGTCAACCAGCTTGTCTTCTGTGTATGCCGTGATCTT 321
|| ||||||||||| |||||||| || || ||||| || || ||||| | || ||||||
Sbjct 232 ACGAAAGTAGCTCTTAACGTTGGTGTAAATCAGCTCGTTTTTTGTGTCTTTCGCGATCTT 291
Query 322 CTTGCTCTCTCTATTCTCGCTCCTCTTGCTTACTTCCGCGAAAGCAA-GATCAGAACTCC 380
||||||||||| |||||||| ||||| |||| ||||| ||||| || ||||||| ||||
Sbjct 292 CTTGCTCTCTCCATTCTCGCACCTCTCGCTTTTTTCCGTGAAAG-AACGATCAGACCTCC 350
Query 381 AATGAATAAAAGCCTTC-TCTTGTCATTCTTCTTTCTGGGCTTAGCAGGGGTATTTGGGA 439
||||||| ||| | || |||| ||| |||||||||| || ||||||||| |||||||||
Sbjct 351 TATGAATAGAAG-CATCTTCTTTTCACTCTTCTTTCTTGGTTTAGCAGGGATATTTGGGA 409
Query 440 ACCAATTGTTATTTCTCATCGGTCTTA-CATACACAAATCCAACTTATGCTGCTGCCATT 498
|||| || ||||||| || ||| ||| | ||||| |||||||||||||||||||| ||
Sbjct 410 ACCAGTTACTATTTCTTATGGGT-TTATCTTACACGAATCCAACTTATGCTGCTGCTATA 468
Query 499 CAACCATCCATCCCGGTCTTTACCTTTCTCTTGGCTGTAATGATGGGTACAGAAAGAGTG 558
|||||||| ||||| |||||||| |||||||||||||| ||||||||||||||| ||||
Sbjct 469 CAACCATCAATCCCTGTCTTTACATTTCTCTTGGCTGTCTTGATGGGTACAGAAAAAGTG 528
Query 559 AATTTGTTGAGAA-TCGAAGGTCAAACTAAGGTTGGAGGCACACTTGTGTGTGTTAT-GG 616
|| ||||||| || |||| || ||||| || |||||||| || ||||| |||||| | ||
Sbjct 529 AACTTGTTGA-AAGTCGAGGGCCAAACGAAAGTTGGAGGTACTCTTGTTTGTGTT-TCGG 586
Query 617 GTGCCGTCTTTATGG-TTCTATTTCGAGGTCCAGCCTTGTTAGGAGATAAAGATGCAG-A 674
|||| | |||| || | ||||| |||||||||||||| |||| ||||||||||| |
Sbjct 587 GTGCTATAGCGATGGCTT-TGTTTCGTGGTCCAGCCTTGTTTGGAGGTAAAGATGCAGCA 645
Query 675 CTTTGCGA-TGAACAA-TGAAATCAGTGCTA-AAGGTCAACCTGAGCCTACTGGGTGGTT 731
|| | | |||| || || ||| | || || || ||||||| |||| || |||||||||
Sbjct 646 GATT-C-AGTGAA-AAGTGTAATTATTGATAGAA-GTCAACCAGAGCTTAATGGGTGGTT 701
Query 732 AGTCTCTGGTTTTCTCGATCTTGGATTTGAGAC-ATGGCACATTGGAGTTTTATGCTTGA 790
||||||| ||||||| | |||||| ||||| | ||||||||||||||||||||| ||||
Sbjct 702 AGTCTCTAGTTTTCTTGGTCTTGGGTTTGA-TCAATGGCACATTGGAGTTTTATGTTTGA 760
Query 791 TTGGAAACTGCATGTGTATGGCTACTTTTCTTGCCATTCAGGCGCCACTTTTGAAGAAGT 850
|||||||||| |||||||||||| ||||||| || | || || || ||||||||||||
Sbjct 761 TTGGAAACTGTATGTGTATGGCTGCTTTTCTCGCTGTCCAAGCACCGGTTTTGAAGAAGT 820
Query 851 ATCCGGCAAATCTTTCTGTTGCTGCAT-TGTCATACTTCTTTGGTACAGT-ACTAATG-T 907
|||| || | ||||| |||||||| | | ||||||||||| ||| || | | ||||| |
Sbjct 821 ATCCTGCCTACCTTTCGGTTGCTGCGTAT-TCATACTTCTTCGGTGCA-TCAATAATGAT 878
Query 908 GCACAACAGCTTTCTT-TATGGTAAAGGAGCCAT-TGGATTGGAGGC-TAACACAATCTG 964
|||||||||| |||| | || || | ||||| | ||||||| || ||||||||||||
Sbjct 879 -CACAACAGCTATCTTGTTTGTTAGA-GAGCC-TAAAGATTGGA-GCTTAACACAATCTG 934
Query 965 AGGTTCTTGCAGTTATATAT-GCAGGAGT-TATCGCGTCAGCACTAAACTATGGACTCTT 1022
|||||||||| ||||||| | |||||||| | | || ||||| |||||||||||||||||
Sbjct 935 AGGTTCTTGCTGTTATAT-TCGCAGGAGTGT-TTGCCTCAGCTCTAAACTATGGACTCTT 992
Query 1023 GACTTGGTCCAATAAGATTATTGGTCCTGCCTTGGTTGCTCTCTACAATCCTCTTCAGCC 1082
||||||||||||||| ||| |||| |||| |||||| | || |||||||||||||||||
Sbjct 993 GACTTGGTCCAATAAAATTCTTGGAGCTGCTTTGGTTTCCCTATACAATCCTCTTCAGCC 1052
Query 1083 TGCTGCATCAGCGTTCCTATCGAGAATCTTTC-TCGGTAGCCCTATTTATCTCGGAAGTG 1141
||| |||| || || |||||| ||| |||| |||| ||||| || ||||| ||||| |
Sbjct 1053 TGCAACATCGGCCTTTTTATCGACAAT-TTTCCTCGGCAGCCCGATCTATCTTGGAAGCG 1111
Query 1142 TTGTGGGTGGATTCTTCATCATTCTA-GGACTCTATATGGTCACTTGGGCATCATTT-AG 1199
|| |||||||| || |||||||| | || || |||||||| ||||||||||| || ||
Sbjct 1112 TTTTGGGTGGAATCCTCATCATT-TGCGGGCTTTATATGGTTACTTGGGCATC-TTACAG 1169
Query 1200 AGAGCGAA-AAACA 1212
||||| || |||||
Sbjct 1170 AGAGC-AACAAACA 1182
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70230562455
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5