BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492932
Length=2418
Score E
Sequences producing significant alignments: (Bits) Value
AT4G19180.1 | Symbols: | GDA1/CD39 nucleoside phosphatase fami... 3843 0.0
> AT4G19180.1 | Symbols: | GDA1/CD39 nucleoside phosphatase family
protein | chr4:10485325-10488413 REVERSE LENGTH=2753
Length=2753
Score = 3843 bits (2081), Expect = 0.0
Identities = 2312/2424 (95%), Gaps = 14/2424 (1%)
Strand=Plus/Plus
Query 1 ATGGTTTTTGGTAGGATTACTGAACTTTTTACTGCTGCATCGAGTCGATTTTCAGCGGGT 60
||||||||||||||||| |||||||||||||| ||||| || |||||||| ||||||||
Sbjct 338 ATGGTTTTTGGTAGGATCACTGAACTTTTTACAGCTGCGTCAAGTCGATTACCAGCGGGT 397
Query 61 TCGCAATCATCTGTTCCGTATATGCCTACTGGATCATCACCGGATGTAGGAACTTCAGCG 120
|| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 398 TCACAATCATCTGTTCCATATATGCCTACTGGATCATCACCGGATGTAGGAACCTCAGTT 457
Query 121 GCGGATTCCATCAGTATTGGGAATGGTGGACGAAAGAATAGTTTGAGACACTCAGCGTCT 180
||||||| || |||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 458 TCGGATTCAATAAGTATTGGGAATGGTGGACGGAAGAATTGTTTGAGACACTCAGCGTCT 517
Query 181 CTCCAAGATTTTTCTTCATATCATGGGTTTGATCCTGAAGAATCCATTCTTGCTCGGGAA 240
||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||
Sbjct 518 CTCCAAGATTTTTCTTCGTACCATGGGTTTGATCCTGAAGAATCCATTCTTCCTCGGGAA 577
Query 241 GCTATATCATGGGGACTAAATGGATCAAGTTTTTCCAAGGAAAAGGGGAGTGTCCCGAAT 300
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 578 GCTATATCATGGGGACAAAATGGATCAAGTTTTTCCAAGGAAAAGGGGAGTGTCCCTAAT 637
Query 301 GGGACCAATCCATCTACACGCCGTAAATGGATCCGCGCGGTTATGATTGTTTTGTGCCTG 360
|||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct 638 GGGACCAATCCATCTACACGCCGTAAATTGATACGCGCGGTTATGATTGTTATGTGCCTG 697
Query 361 TTTCTGTTTGCTTTTCTGGTGTATATAGTCTCCATGTATATTTATACAAACTGGTCTCGG 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 698 TTTCTGTTTGCTTTTCTGGTGTATATAGTCTCCATGTATATTTATACAAACTGGTCACGG 757
Query 421 GGAGCATCAAGATATTATGTTGTGTTTGACTGTGGAAGTACTGGGACTCGTGCATATGTT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 758 GGAGCATCAAGATATTATGTTGTGTTTGACTGTGGAAGTACTGGGACTCGTGCATATGTT 817
Query 481 TATCAGGCTTCTATAAACTACAAGAAAGATAGTAGTCTCCCCATTGTTATGAAATCTTTG 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 818 TATCAGGCTTCCATAAACTACAAGAAAGATAGTAGTCTCCCCATTGTTATGAAATCTTTG 877
Query 541 ACAGAAGGTATTTCTAGAAAGAGTAAGGGTCGTGCTTATGATCGGATGGAGACAGAACCT 600
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 878 ACAGAAGGTATTTCTAGAAAGAGTAGGGGTCGTGCTTATGATCGGATGGAGACAGAGCCT 937
Query 601 GGGTTTGATAAGCTTGTCAACAACAGAACAGGCCTGAAAACTGCGATAAAACCCCTTATT 660
|||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct 938 GGGTTTGATAAGCTCGTCAATAACAGAACAGGCCTGAAAACTGCAATTAAACCCCTTATT 997
Query 661 CAGTGGGCAGAGAAGCAAATCCCGAAGCACGCTCATAGAACCACATCTCTCTTTGTTTAT 720
||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct 998 CAGTGGGCAGAGAAGCAAATCCCAAAGAATGCTCATAGAACCACATCTCTCTTTGTTTAC 1057
Query 721 GCAACAGCGGGCGTCCGGAGGCTTCGTCCTTCTGATTCAAGCTGGATTTTAGGTAACGTG 780
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 1058 GCAACAGCAGGCGTCCGGAGGCTTCGTCCTGCTGATTCAAGCTGGATTTTAGGTAATGTG 1117
Query 781 TGGTCTATACTAGCGAAGTCTCCCTTCACTTGCCGAAGGGAGTGGGTTAAGATCATCAGT 840
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1118 TGGTCTATACTAGCGAAGTCTCCCTTCACTTGCCGGAGGGAGTGGGTTAAGATCATCAGT 1177
Query 841 GGTACAGAGGAAGCTTATTTTGGATGGACCGCTCTTAACTACCAAACAAGCATGTTAGGA 900
||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct 1178 GGTACTGAGGAAGCTTATTTTGGATGGACCGCCCTTAATTACCAAACAAGTATGTTGGGA 1237
Query 901 GCCCTACCAAAGAAGGCAACATTTGGTGCACTTGATTTAGGTGGCTCATCATTGCAGGTA 960
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1238 GCCCTACCAAAGAAGGCAACATTTGGTGCACTTGACTTAGGTGGCTCATCATTGCAGGTA 1297
Query 961 ACCTTTGAGAATGAGGAGCGGACGCATAATGAGACCAACCTAAATCTCAGAATTGGGTCT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 ACCTTTGAGAATGAGGAGCGGACGCATAATGAGACCAACCTAAATCTCAGAATTGGGTCT 1357
Query 1021 GTTAACCATCATCTTAGTGCATATTCTCTTGCCGGATATGGTCTTAATGATGCGTTTGAA 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 GTTAACCATCATCTTAGTGCATATTCTCTTGCCGGATATGGTCTTAATGATGCGTTTGAT 1417
Query 1081 AGATCTGTTTTTCATCTTTTAAAGAGGCTACCAAATGTCAATAAATCTGATTTGATTGAA 1140
|| |||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 1418 AGGTCTGTTGTTCATCTTTTAAAGAAGCTACCAAATGTCAACAAATCTGATTTGATTGAA 1477
Query 1141 GGAAAATTGGAAATGAAACATCCTTGCTTAAATTCTGGATACAATGGACAGTACATATGT 1200
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1478 GGAAAATTGGAAATGAAACACCCGTGCTTAAATTCTGGATACAATGGACAGTACATATGT 1537
Query 1201 TCTCAATGTGCTTCCAGTGTCCAAGGAGGTAAGAAAGGGAAGTCAGGAGTTCCTATCAAG 1260
||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||
Sbjct 1538 TCTCAGTGTGCTTCCAGTGTCCAAGGAGGTAAAAAAGGAAAGTCAGGAGTTTCTATCAAG 1597
Query 1261 CTCGTTGGTGCTCCAAACTGGGGAGAATGCAGCGCACTGGCAAAAAATGCTGTAAATAGC 1320
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 1598 CTCGTTGGTGCTCCAAACTGGGGAGAGTGCAGCGCACTTGCAAAAAATGCTGTAAATAGC 1657
Query 1321 TCTGAATGGTCAAACACAAAACATGGAGTTGATTGTGATTTGCAGCCTTGTGCTCTTCCT 1380
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1658 TCTGAATGGTCAAACGCAAAACATGGAGTTGATTGTGATTTGCAGCCTTGTGCTCTTCCT 1717
Query 1381 GATGGTTACCCTCGTCCTCATGGTCAGTTCTATGCTGTATCTGGATTCTTCGTGGTGTAC 1440
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1718 GATGGTTACCCTCGTCCTCATGGTCAGTTCTATGCTGTATCCGGATTCTTCGTGGTGTAC 1777
Query 1441 CGTTTTTTCAACTTAAGTGCTGAAGCTTCCCTTGATGATGTCTTGGAAAAGGGTAGGGAA 1500
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1778 CGTTTTTTCAACTTAAGTGCTGAAGCATCCCTTGATGATGTATTGGAAAAGGGTAGGGAA 1837
Query 1501 TTTTGTGAAAAGGCATGGCAAGTAGCCAGAACCAGTGTTTCTCCACAACCCTTCATTGAA 1560
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1838 TTTTGTGACAAGGCTTGGCAAGTAGCCAGAACCAGTGTTTCTCCACAACCCTTCATTGAA 1897
Query 1561 CAGTACTGCTTTAGAGCGCCATACATAGTCTCCCTGTTACGAGAAGGTTTATATATTACA 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1898 CAGTACTGCTTTAGAGCGCCATACATAGTCTCCCTGTTACGAGAAGGTTTATATATTACA 1957
Query 1621 GATAAGCAAATCATAATTGGGTCTGGGAGTATAACTTGGACACTTGGAGTAGCTCTTTTG 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1958 GATAAGCAAATCATAATTGGGTCTGGGAGTATAACTTGGACACTTGGAGTAGCTCTTCTG 2017
Query 1681 GAAGCAGGGAAGGCTTTATCTTCTACATTGGGACTAAAGAGCTATGAGACTCTGAGCATG 1740
||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2018 GAATCGGGGAAGGCTCTATCTTCTACATTGGGACTGAAGAGCTATGAGACTCTGAGCATG 2077
Query 1741 AAAATAAACCCAATTGCCCTTATATCTATCTTGCTCTTCTCACTGCTTCTGCTTCTCTGT 1800
|| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 2078 AAGATAAACCCAATTGCCCTTATATCTATCTTGATCTTGTCACTGCTTCTGCTTCTCTGT 2137
Query 1801 GCACTTTCACGCGTCAGCAATTGTTTGCCAAGATTCTTTAGAAAGTCGTATCTCCCACTT 1860
||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2138 GCACTATCACGTGTCAGCAATTGTTTGCCAAGATTCTTTAGAAAGTCATATCTCCCACTT 2197
Query 1861 TTTAGACACAATAGCGCCTCAGCTTCGTCTGTTCTTAACATCCCGTCTCCATTCAGATTC 1920
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2198 TTTAGACACAATAGCACCTCAGCTTCGTCTGTTCTTAACATCCCGTCTCCCTTCAGATTC 2257
Query 1921 CAGCGATGGAGTCCTATGAGTACAGGGGTAAAGACACCGTTGAGTCCAACAGTTCGGGGA 1980
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2258 CAGCGATGGAGTCCTATGAGTACAGGGGTAAAGACACCATTGAGTCCAACAGTTCGGGGA 2317
Query 1981 TCACCGCGTAGGCCATTTAGTTTTGGAAGCAGCATACAGCTCATGGAATCTTCTTCATTG 2040
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 2318 TCACCGCGTAGGCCATTTAGTTTTGGAAGCAGCATCCAGCTCATGGAATCTTC---ATTG 2374
Query 2041 TACTCATCGAGCAGCTGCGTTATGCATAGTTGTTCTTCTGATAGCTTAGGGGATATGCAA 2100
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2375 TACTCATCGAGTAGCTGCGTTATGCATAGTTGTTCTTCTGATAGCTTAGGGGATATACAA 2434
Query 2101 TATGACAGCACTAGTTCCTTCTGGTCCTCCCCTCGCAGGAGTCAAATGCGTCTCCAAAGC 2160
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2435 TATGACAGTACTGGTTCCTTCTGGTCCTCCCCTCGCAGGAGTCAAATGCGTCTCCAAAGC 2494
Query 2161 CGGAGATCGCAATCTCGAGAAGATCTTAGTTCGTCACTCGCTGATTCACACATGCTCAAG 2220
|| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2495 CGAAGATCGCAATCTCGAGAAGATCTTAGTTCATCGCTCGCTGATTCACACATGCTCAAA 2554
Query 2221 ATGTAGGAGAAGAATTTTTTGGTACGGCTTTTGTCACTTCCACACCCTCCTAATTTTTCT 2280
||||||||||| | ||||| |||||||||||||||||||||||||| |||||||||| |
Sbjct 2555 ATGTAGGAGAA-A-TTTTT-GGTACGGCTTTTGTCACTTCCACACCAGCCTAATTTTT-T 2610
Query 2281 CtttttttttGGTCATGAGAATCATAGTATa-aaa--aaaaaaaGGGGAAAATTTCATGA 2337
|| |||| ||| |||||||||| | |||| ||| ||||||| ||||||| |||||||
Sbjct 2611 CTATTTTCC-GGTTATGAGAATCACAATATAGAAAGGAAAAAAATGGGAAAACTTCATGA 2669
Query 2338 GCAAAA-TTTCCTTGTTTCAGTTGACATGTAATTCTTT-T-TATACCATATACTTATATA 2394
|||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 2670 GCAAAAATTTCCTTGTTTCAGTTGACATGTAATTCTTTCTATATACCATATACTTATATA 2729
Query 2395 TGATTACTAATTTAACCTCAGTTC 2418
||||||||||||||||||||||||
Sbjct 2730 TGATTACTAATTTAACCTCAGTTC 2753
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120079703640
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5