BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492954
Length=3764
Score E
Sequences producing significant alignments: (Bits) Value
AT4G19020.1 | Symbols: CMT2 | chromomethylase 2 | chr4:10414526... 5443 0.0
> AT4G19020.1 | Symbols: CMT2 | chromomethylase 2 | chr4:10414526-10421209
FORWARD LENGTH=4161
Length=4161
Score = 5443 bits (2947), Expect = 0.0
Identities = 3349/3542 (95%), Gaps = 32/3542 (1%)
Strand=Plus/Plus
Query 230 AAGGTGGAGTTTCGCAGAGGAAGTCCTCTCGTGGTAAGACGCAGCCGCTGCTTA-TGCTG 288
|||| ||||||||||||||||||| ||||||||||||| | ||||||||||||| | ||
Sbjct 374 AAGGGGGAGTTTCGCAGAGGAAGTTCTCTCGTGGTAAGTCACAGCCGCTGCTTACT-TTG 432
Query 289 ACGAACGGTTGTCAGCTTCGGAGGTCGCTGAGATTTAGGCCTGTGGATGCAAATTTCGAC 348
|||||||||||||||||||||||||||| |||||||||| | ||||||| |||||| |||
Sbjct 433 ACGAACGGTTGTCAGCTTCGGAGGTCGCCGAGATTTAGGGCGGTGGATGGAAATTTTGAC 492
Query 349 AGTGTATGCTCGGTTCCGGTCACCGGAAAGTTTGGGTCGAGGAAGAGAAAGAGTAATAGT 408
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 493 AGTGTATGCTCGGTTCCGGTGACTGGAAAGTTTGGGTCGAGGAAGAGAAAGAGTAATAGT 552
Query 409 GCTCTCGATAAGAAGGAAAGCTCAGATTCTGAGGGATTGACATTCAAAGAAATAGCTGTA 468
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 553 GCTCTCGATAAGAAGGAAAGCTCAGATTCTGAGGGACTGACATTCAAAGATATAGCTGTA 612
Query 469 ATTGCCAAGAGCCTGGAGATGGAAATCATTTCCGAGTGCCAATATAAGAACAGCGTTGCT 528
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 613 ATTGCCAAGAGCCTGGAGATGGAAATAATTTCCGAGTGCCAATATAAGAACAACGTTGCT 672
Query 529 GAAGGTAGATCAAGATTGCAAGATTCAGCCAAGAGGAATGTTGACAGTGATTCATTATTA 588
|||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||||||||
Sbjct 673 GAAGGTAGATCAAGATTGCAAGATCCAGCCAAGAGGAAAGTTGATAGTGATACATTATTA 732
Query 589 TCTTCACGCATCAATAGTTCTAAACAGAGTCTAGGCAGCAATAAACGAATGAGGAGATCT 648
| |||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 733 TATTCAAGCATCAATAGTTCTAAACAGAGTCTCGGAAGCAATAAACGAATGAGGAGATCT 792
Query 649 CCAAGATTCATGAAGGGAACAGAGAATGAGGGAGAAGAAAATCTAGGCAATTCTAAA-AA 707
| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct 793 CAAAGATTCATGAAGGGAACGGAGAATGAGGGAGAAGAAAATCTAGGCAAGTCTAAAGGA 852
Query 708 ACAAGGGAAGTCTCTGGCATCTGGGAGCCCA-TTCAGAAGATCTCCAAGGCTATCTGGAA 766
| |||||| ||||||||||||| || || ||| |||||||| |||||||||||||||
Sbjct 853 A-AAGGGATGTCTCTGGCATCT---TGCTCATTTC-GAAGATCTACAAGGCTATCTGGAA 907
Query 767 TTGTTGAAATTGGCCACACAGAAACTTTGAACTCAATAAAAGATTGTAGCCCAGCATTAT 826
||| |||| |||| ||||||||||||||||| || |||||||||| |||| |||||||
Sbjct 908 CTGTGGAAACTGGCAACACAGAAACTTTGAACAGAAGAAAAGATTGTGGCCCGGCATTAT 967
Query 827 GTGGTGCGGAACAGGTGAGAGGAACTGAGAAGCTGGTGCAAATTAGTGAGAATGATAACT 886
||||||| ||||||||||| |||||||||| |||||||||||||||| |||| ||| |||
Sbjct 968 GTGGTGCAGAACAGGTGAGGGGAACTGAGAGGCTGGTGCAAATTAGTAAGAAGGATCACT 1027
Query 887 GTTGTGCGGCTATAAAGAAATGTGAAGGTGATGGCCTAGTTTCATCCAAGCAAGAGCTAT 946
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 GTTGTGAGGCTATGAAGAAATGTGAAGGTGATGGCCTAGTTTCATCCAAGCAAGAGCTAT 1087
Query 947 TAGTTTTTTCTTCGGGTTGCTTCAAGAAAACTCTAAATGGTTGTAGGGACAGAACGTTAG 1006
|||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1088 TAGTTTTTCCTTCGGGTTGCATCAAGAAAACTGTAAATGGTTGTAGGGACAGAACGTTAG 1147
Query 1007 GAAAACCCAGATCTTCTGACCTAAATGCGGATGATATTCAAACTAGCTCTTTGAAAATTA 1066
|||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||
Sbjct 1148 GAAAACCCAGATCTTCTGGCCTAAATACGGATGATATTCACACTAGCTCTTTGAAAATTA 1207
Query 1067 GCAAAAATGTTACTAGTAATGGATTAACTATGATGACCGCGTTAGTGGAGCAAGAAGCAA 1126
||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| ||||
Sbjct 1208 GCAAAAATGATACTAGTAATGGATTAACTATGACGACTGCGTTAGTGGAGCAAGATGCAA 1267
Query 1127 TGGAGTCATTACTTCAGGGTGAGACTAGTGCTTGTGGTGCTGCTGATAAGGGAACAACTA 1186
||||||| |||||||||||| | ||||||||||||||||||||||||||||||| ||||
Sbjct 1268 TGGAGTCTTTACTTCAGGGTAAAACTAGTGCTTGTGGTGCTGCTGATAAGGGAAAAACTC 1327
Query 1187 GGGAGATGCATGTAAATTCTACTGTGATCTATCTCTCTGACACCGATGAACCGTCTTCTA 1246
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1328 GGGAAATGCATGTAAATTCTACTGTGATCTATCTCTCTGACAGCGATGAACCGTCTTCTA 1387
Query 1247 TTGAATATGTGTATATGAAAAGTTCAAATGGAGATAATTTGACACAAATCGAAAGTGGAA 1306
||| | |||| || |||||||||||||||||||||| |||||||||||
Sbjct 1388 TTG---A-----ATAT------TT-AAATGGAGATAATTTGACACAAGTCGAAAGTGGAT 1432
Query 1307 CTACCCTCTCCTCTGGGGGGAATGAGGGAATCGTTTCATTAGATCTGCATAGTCCAACGA 1366
|| |||||||||||||||| |||||||||||||||||| | |||||| ||| ||||||||
Sbjct 1433 CTGCCCTCTCCTCTGGGGGTAATGAGGGAATCGTTTCACTGGATCTGAATAATCCAACGA 1492
Query 1367 AATCAACCAAGAGAAAGGGTAAAAGGGTAACCCGGACTGCTGTCCAAGAGCAGAACAAAC 1426
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1493 AATCAACCAAGAGAAAGGGTAAACGGGTAACCCGGACTGCTGTCCAAGAGCAGAACAAAC 1552
Query 1427 GTAGTATCTGTTTTTTCATTGGAGAGCCAATTTCTTGCGAGGAGGCTCAAGAAAGATGGC 1486
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1553 GTAGTATCTGTTTTTTCATTGGAGAGCCACTTTCTTGCGAGGAGGCTCAAGAAAGATGGC 1612
Query 1487 GCTGGAGATATGATCTCAAGGAACGCAAATCTAAGAGTAGAGGCCAACAATCAGAGGATG 1546
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1613 GCTGGAGATATGAACTTAAGGAACGCAAATCTAAGAGTAGAGGCCAACAATCAGAGGATG 1672
Query 1547 ACGAAGACAAGATTGTTGCAAATGTGGAATGCCATTATTTGCAAGCAAAAGTCGACGGTC 1606
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1673 ACGAAGACAAGATTGTTGCAAATGTAGAATGCCATTATTCGCAAGCAAAAGTCGACGGTC 1732
Query 1607 ACACCTTTAGCCTTGGAGACTTTGCCTGCATAAAGGGTGAAGAAGAAGAGACCCATGTTG 1666
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 1733 ACACCTTTAGCCTTGGAGACTTTGCCTACATAAAGGGTGAAGAAGAAGAAACCCATGTTG 1792
Query 1667 GCAAGATACTAGAGTTTTTCAAGACAACAGATGAAGAAAGCTACTTCCGAGTTCAGTGGT 1726
|| ||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 1793 GCCAGATAGTAGAGTTTTTTAAGACAACAGATGGAGAAAGCTACTTCCGAGTTCAGTGGT 1852
Query 1727 TTTACAGAGCAACGGATACAGTGATGAAACAGCAGGCTACTAATCATGACAAAAAGCGTC 1786
|||||||||||||||||||| | ||| ||| ||||||||||||||||||||||| |||||
Sbjct 1853 TTTACAGAGCAACGGATACAATAATGGAACGGCAGGCTACTAATCATGACAAAAGGCGTC 1912
Query 1787 TCTTCTATTCTACCGTAATGAATGACAATCCAGTAGATTGTCTTATTTCTAAAGTTACTG 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1913 TCTTCTATTCTACCGTAATGAATGACAATCCAGTAGATTGTCTTATTTCTAAAGTTACTG 1972
Query 1847 TTTTACAAGTTTCACCTAGGGCCGGATTGAAGCCCAATTCTATAAAATCTGACTACTATT 1906
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1973 TTTTACAAGTTTCACCTAGGGTCGGATTGAAGCCCAATTCTATAAAATCTGACTACTATT 2032
Query 1907 TTGATATGGAGTATTGCGTGGAGTATTCAACATTTCAAACCTTGAAAAATCCTAAATTGT 1966
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||
Sbjct 2033 TTGATATGGAGTATTGTGTGGAGTATTCAACATTTCAAACCTTGAGAAATCCTAAAACGT 2092
Query 1967 CCGAAAACAAGCTTGAGTGTTGCGCTGATGTGGTACCTACAGAATCCACTGAGTCTATTT 2026
|||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||
Sbjct 2093 CCGAAAACAAGCTTGAGTGTTGTGCCGATGTGGTACCTACAGAATCCACTGAATCTATTT 2152
Query 2027 TGAAAAAGAAAATTTTTAGCGGAGAGCTTCCTGTGCTTGATCTTTACAGTGGTTGTGGTG 2086
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2153 TGAAAAAGAAAAGTTTTAGCGGAGAGCTTCCTGTGCTTGATCTTTACAGTGGTTGTGGTG 2212
Query 2087 GAATGTCAACTGGGTTAAGTCTTGGAGCCAAAATATCTGGTGTTGATGTCGTGACGAAAT 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2213 GAATGTCAACTGGGTTAAGTCTTGGAGCCAAAATATCTGGTGTTGATGTCGTGACGAAAT 2272
Query 2147 GGGCTGTTGACCAGAATATGGCTGCCTGTGAGAGCTTGAAATTGAACCATCCAAATACAC 2206
||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| || |
Sbjct 2273 GGGCTGTGGACCAGAATACGGCTGCCTGTAAGAGCTTGAAATTGAACCATCCAAACACGC 2332
Query 2207 AGGTTAGGAATGATGCTGCTGGAGACTTCCTTCAACTTTTGAAGGAGTGGGATAAATTAT 2266
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 2333 AGGTTAGGAATGATGCTGCTGGAGACTTCCTCCAACTTTTGAAGGAATGGGATAAATTAT 2392
Query 2267 GCAAGCGCTATGTGTTTAATAATGATCAGAGAACTGATACATTAAGATCCGTAAATTCTA 2326
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2393 GCAAGCGATATGTGTTTAATAATGATCAGAGAACTGATACATTAAGATCCGTAAATTCAA 2452
Query 2327 -TAAAAGAAACCAGTGAAAGTAGCTCTTCTAGAGACGATGATTCAGATTCTGAGGAGTAC 2385
| |||||||| |||| ||| ||||||||||| || ||||||||||||||||||||||||
Sbjct 2453 CT-AAAGAAACTAGTGGAAGCAGCTCTTCTAGTGATGATGATTCAGATTCTGAGGAGTAC 2511
Query 2386 GAAGTGGAAAAGCTGGTTGATATATGCTTTGGTGATCCTGACAAGACAGGAAAAAATGGC 2445
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2512 GAAGTGGAAAAGCTAGTTGATATATGCTTTGGTGATCATGACAAGACAGGAAAAAATGGC 2571
Query 2446 CTGAAGTTTAAGGTGCACTGGAAAGGATACACAAGCGACGAAGATACATGGGAACTAGCA 2505
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2572 CTGAAGTTTAAGGTGCACTGGAAAGGATACAGAAGCGACGAAGATACATGGGAACTAGCA 2631
Query 2506 GAGGAATTGAGTAACTGTCAAGATGCCATTCGGGAGTTTGTAACTAGTGGATTTAAGTCC 2565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2632 GAGGAATTGAGTAACTGTCAAGATGCCATTCGGGAGTTTGTAACTAGTGGATTTAAGTCC 2691
Query 2566 AAGATCTTGCCACTTCCTGGTCGTGTTGGTGTGATATGTGGGGGACCTCCATGCCAAGGA 2625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2692 AAGATCTTGCCACTTCCTGGTCGTGTTGGTGTGATATGTGGGGGACCTCCATGCCAAGGA 2751
Query 2626 ATTAGTGGCTATAACCG-CTATAGGAATGTTGATTCTCCGTTGAATGATGAAAGGAATCA 2684
||||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||
Sbjct 2752 ATTAGTGGCTATAACCGGC-ACAGGAATGTTGATTCTCCATTGAATGATGAAAGGAATCA 2810
Query 2685 GCAAATTATAGTTTTCATGGACATAGTGGAGTATCTGAAACCCTCATATGTGTTGATGGA 2744
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2811 GCAAATTATAGTTTTTATGGACATAGTGGAGTATCTGAAACCCTCATATGTGTTGATGGA 2870
Query 2745 AAATGTTGTTGATATTCTGCGTTTGGACAAAGGTTCTCTTGGGCGATACGCTTTGAGCCG 2804
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2871 AAATGTTGTTGATATTCTGCGTATGGACAAAGGTTCTCTTGGGCGATACGCTTTGAGCCG 2930
Query 2805 TCTTGTGAACATGAGATATCAAGCAAGGTTAGGTATCATGACAGCTGGTTGCTATGGTCT 2864
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2931 TCTTGTGAACATGAGATACCAAGCAAGGTTAGGTATCATGACAGCTGGTTGCTATGGTCT 2990
Query 2865 TTCCCAATTTCGATCCAGAGTTTTCATGTGGGGAGCTGTTCCAAACAAGAACCTACCTCC 2924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2991 TTCCCAATTTCGATCCAGAGTTTTCATGTGGGGAGCTGTTCCAAACAAGAACCTACCTCC 3050
Query 2925 GTTTCCGCTTCCAACCCATGATGTTATTGTCAGATATGGGCTTCCACTTGAGTTCGAGCG 2984
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3051 GTTTCCGCTTCCAACGCATGATGTTATTGTCAGATATGGGCTTCCACTTGAGTTCGAGAG 3110
Query 2985 GAATGTAGTTGCTTATGATGAAGGCCAACCCAGGAAACTTGAGAAAGCTCTTGTTCTAAA 3044
||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||
Sbjct 3111 GAATGTAGTTGCTTATGCTGAAGGCCAACCCAGAAAACTTGAAAAAGCTCTTGTTCTAAA 3170
Query 3045 AGATGCGATATCAGATCTTCCTCATGTATCAAACGACGAAGAACGGGAGAAGTTGCCTTA 3104
|||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 3171 AGATGCGATATCAGATCTTCCTCATGTATCAAACGATGAAGACCGGGAGAAATTGCCTTA 3230
Query 3105 TGAAAGTCTCCCCGAGACAGATTTTCAGAGATACATTAGATCAACCAAATGCGATTTGAC 3164
|||||||||||| | |||||||||||||| |||||||||||||||||| | ||||||||
Sbjct 3231 TGAAAGTCTCCCAAAAACAGATTTTCAGAGGTACATTAGATCAACCAAACGTGATTTGAC 3290
Query 3165 AGGCTCTGCAACTGATAACTCTAACAAAAGGAA-AATGCTACTGCATGATCACAGGCCGT 3223
||||||||||| |||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct 3291 AGGCTCTGCAATTGATAACTGTAACAAAAG-AACAATGCTACTGCATGATCACAGGCCGT 3349
Query 3224 TCCATATAAATGAAGATGATTATGCCCGAGTTTGCCAAATCCCAAAGAGGAAGGGAGCTA 3283
|||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||
Sbjct 3350 TCCATATAAATGAAGACGACTATGCCCGAGTTTGCCAAATCCCCAAGAGGAAGGGAGCTA 3409
Query 3284 ATTTCAGGGATCTTCCAGGGTTAATCGTCAGAAACAATACAGTCTGTCGTGACCCATCAA 3343
|||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct 3410 ATTTCAGGGATCTTCCGGGGTTAATCGTCAGAAACAATACAGTATGTCGTGATCCATCAA 3469
Query 3344 TGGAACCGGTTATTCTGCCATCAGGAAAGCCTTTGGTACCAGGATACGTCTTTAATTTTC 3403
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3470 TGGAACCGGTTATTCTGCCATCAGGAAAGCCTTTGGTACCAGGATACGTCTTTACTTTTC 3529
Query 3404 AGCAAGGGAAATCTAAAAGACCGTTTGCCCGTCTTTGGTGGGACGAAACAGTTCCAACTG 3463
|||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |
Sbjct 3530 AGCAAGGGAAATCTAAAAGACCGTTTGCTCGTCTTTGGTGGGATGAAACTGTTCCAACCG 3589
Query 3464 TTCTAACAGTCCCAA-ACTGCCACAGTCAGGCGTTATTGCATCCCGAGCAAGATCGAATG 3522
||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| ||
Sbjct 3590 TTCTAACAGTCCCAACA-TGCCACAGTCAGGCGTTATTGCATCCTGAGCAAGATCGAGTG 3648
Query 3523 CTAACCATAAGAGAATCTGCACGGCTTCAAGGTTTCCCTGATTACTTCCAGTTTTGTGGA 3582
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3649 CTAACCATAAGAGAATCTGCACGGCTTCAAGGTTTCCCTGATTACTTCCAGTTCTGTGGA 3708
Query 3583 ACCATTAAAGAAAGGTATTGTCAGATTGGAAATGCAGTGGCAGTCTCGGTTTCTCGTGCT 3642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3709 ACCATTAAAGAAAGGTATTGTCAGATTGGAAATGCAGTGGCAGTCTCGGTTTCTCGTGCT 3768
Query 3643 TTAGGGTATTCTCTTGGTATGGCATTTCTTGGTCTAGCCAGCGACGAGCATCTGATAAAA 3702
||||| ||||| ||||||||||| |||| |||||||||| ||||||||||||| ||||||
Sbjct 3769 TTAGGTTATTCGCTTGGTATGGCTTTTCGTGGTCTAGCCCGCGACGAGCATCTTATAAAA 3828
Query 3703 CTTCCCCAAAACTTTTCTCATTCAACTTACCCTCAGCTTCGAGAAACCATTCCTCATTAA 3762
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
Sbjct 3829 CTTCCCCAAAACTTTTCGCATTCAACTTACCCTCAGCTTCAAGAAACCATTCCTCATTGA 3888
Query 3763 AG 3764
||
Sbjct 3889 AG 3890
Score = 483 bits (261), Expect = 7e-135
Identities = 338/375 (90%), Gaps = 6/375 (2%)
Strand=Plus/Plus
Query 1 ATGTTATCGCCGGCGAAATGTGAGTCAGAAGAAGCTCAAGCTCCATTAGATCTTCATTCT 60
|||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct 1 ATGTTATCGCCGGCCAAATGTGAGTCAGAAGAGGCTCAAGCTCCATTGGATCTCCATTCT 60
Query 61 TCTTCTAGATCTGAACCGGAATGCCTCTCTCTCGTCCTCTGGT-TACCCAATCCCGAAGA 119
||||||||||||||||||||||| |||||||| |||||||||| | |||||||| |||||
Sbjct 61 TCTTCTAGATCTGAACCGGAATGTCTCTCTCTTGTCCTCTGGTGT-CCCAATCCTGAAGA 119
Query 120 CGCTGCTCCTTCGTCTAGTAGAGAACTCACGAAGCTCCCCGACGACGGAGAGATGAGATT 179
|||||||| || |||| ||||||||||| |||||||||||| ||||||||||||| ||
Sbjct 120 AGCTGCTCCGTCCTCTACTAGAGAACTCATAAAGCTCCCCGACAACGGAGAGATGAGTTT 179
Query 180 GAGGAGATCTGCGAGGCTTAAATGTAATTCGCCTGTAGATAATGGAGGAGAAGGTG-GAG 238
||||||||| ||| |||||| ||||||||||||| ||| || ||||||||||| | |||
Sbjct 180 GAGGAGATCCACGACGCTTAATTGTAATTCGCCTGAAGAGAACGGAGGAGAAGG-GAGAG 238
Query 239 TTTCGCAGAGGAAGTCCTCTCGTGGTAAGACGCAGCCGCTGCTTATGCTGACGAACGGTT 298
|||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||
Sbjct 239 TTTCGCAGAGGAAGTCATCTCGTGGTAAGTCACAGCCGCTGCTTATGTTGACGAACGGTT 298
Query 299 GTCAGCTTCGGAGGTCGCTGAGATTTAGG-CCTGTGGATGCAAATTTCGACAGTGTATGC 357
|||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||
Sbjct 299 GTCAGCTTCGGAGGTCGCCGAGATTTAGGGCCC-TGCATGCAAATTTCGACAATGTATGC 357
Query 358 TCGGTTCCGGTCACC 372
||||||||||| |||
Sbjct 358 TCGGTTCCGGTTACC 372
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 187473865991
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5