BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492964
Length=1397
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18970.2 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 2017 0.0
AT5G45670.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 874 0.0
> AT4G18970.2 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr4:10388722-10390991 REVERSE LENGTH=1569
Length=1569
Score = 2017 bits (1092), Expect = 0.0
Identities = 1163/1198 (97%), Gaps = 1/1198 (0%)
Strand=Plus/Plus
Query 1 ATATTCTTCTGACCTTTATTATATACATCCATTTACATTCTTCACGTTATCAGACCAAtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATATTCTTCTGACCTTTATTATATACATCCATTTACATTCTTCACGTTATCAGACCAATC 134
Query 61 tctctcttcttcttcttcacgttctctctcttTTCGGATAAGGGTAGAGATGGCTAGAGT 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 135 TCTCTCTTCTTCTTCTTCACGTTCTCTCTCTTTCCGGATAAGGGTAGAGATGGCTAGAGT 194
Query 121 TTGTGTAATGATGATGGCTATGGCTATGGCTATGGCTATGAACATTGCTATGGGTGACCC 180
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct 195 TTGTGTAATGATGATGGCTATGGCTATAGCTATGGCTATGAACATAGCTATGGGTGATCC 254
Query 181 AATAGCACCATGTTACTTCATATTCGGTGACTCTTTGGTTGATAGTGGAAACAACAATCG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 AATAGCACCATGTTACTTCATATTCGGTGACTCTTTGGTTGATAGTGGAAACAACAATCG 314
Query 241 GCTTACCTCTTTAGCAAGAGCTAATTACTTCCCTTACGGTATCGACTTCCAGTTCGGTCC 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 315 GCTTACCTCTCTAGCAAGAGCTAATTACTTCCCTTACGGTATCGACTTCCAGTACGGTCC 374
Query 301 AACCGGCCGGTTCTCCAACGGAAAAACCACCGTCGATGTCATCACCGAGCTTCTTGGTTT 360
|||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 375 AACCGGTCGCTTCTCCAACGGAAAAACCACCGTCGATGTCATCACTGAGCTTCTTGGTTT 434
Query 361 CGATGACTACATTACACCGTATTCCGAAGCAAGGGGAGAAGATATCCTGAGAGGAGTAAA 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 435 CGATGACTACATTACACCGTATTCCGAAGCAAGGGGAGAAGATATCCTAAGAGGAGTAAA 494
Query 421 CTACGCTTCTGCAGCTGCCGGAATACGAGAAGAAACTGGCCGTCAATTGGGAGCTAGAAT 480
|||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct 495 CTACGCTTCTGCAGCTGCCGGAATCCGAGAAGAAACTGGTCGACAATTGGGAGCTAGAAT 554
Query 481 AACATTTGCAGGGCAAGTAGCTAATCATGTAAACACTGTGTCACAAGTTGTGAACATACT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 AACATTTGCAGGGCAAGTAGCTAATCATGTAAACACTGTGTCACAAGTTGTGAACATACT 614
Query 541 TGGAGACGAGAATGAAGCTGCTAATTACCTAAGCAAATGCATCTACTCAATCGGGTTAGG 600
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 615 CGGAGACGAGAATGAAGCTGCTAATTACCTAAGTAAATGCATCTACTCAATCGGGTTAGG 674
Query 601 CAGTAACGACTATCTCAATAACTATTTTATGCCTGTTTATTACTCCACTGGGAGCCAGTA 660
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 675 CAGTAACGACTATCTCAATAACTATTTTATGCCTGTTTATTACTCCACCGGGAGCCAGTA 734
Query 661 CTCCCCGGATTCCTATGCCAACGACCTCATAAACCGCTACACCGAGCAACTCCGGATAAT 720
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 CTCCCCGGATGCCTACGCCAACGACCTCATAAACCGCTACACCGAGCAACTCCGGATAAT 794
Query 721 GTATAACAACGGAGCGAGGAAGTTTGCGTTAGTTGGTATTGGCGCAATTGGATGCAGTCC 780
|||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||||
Sbjct 795 GTATAACAACGGAGCGAGGAAGTTTGCGCTAGTTGGTATAGGTGCAATAGGATGCAGTCC 854
Query 781 AAATGAGCTGGCTCAAAACAGTAGAGACGGGGTAACTTGTGACGAAAGGATCAATTCCGC 840
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 855 AAATGAGCTGGCTCAAAACAGCAGAGACGGGGTGACTTGTGACGAAAGGATCAATTCCGC 914
Query 841 AAACAGAATCTTCAACAGTAAGCTTGTGTCTCTGGTTGATCATTTCAATCAAAACACACC 900
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 915 TAACAGAATCTTCAACAGTAAGCTTGTGTCTCTGGTTGATCACTTCAACCAAAACACACC 974
Query 901 AGGCGCCAAGTTCACTTACATTAATGCTTATGGTATCTTCCAAGACATGGTAGCTAATCC 960
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 AGGGGCCAAGTTCACTTACATTAATGCTTATGGTATCTTCCAAGACATGGTAGCTAATCC 1034
Query 961 TTCTCGCTATGGGTTTAGGGTTACAAACGCGGGATGTTGTGGAGTTGGGAGGAACAATGG 1020
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1035 TTCTCGCTATGGGTTTAGGGTGACAAACGCGGGATGTTGTGGAGTTGGGAGGAACAATGG 1094
Query 1021 ACAGATAACTTGTCTCCCGGGTCAAGCTCCATGTCTGAACAGGGACGAGTTTGTGTTCTG 1080
||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1095 ACAGATAACTTGTCTTCCGGGTCAAGCTCCATGTCTTAACAGGGACGAGTATGTGTTCTG 1154
Query 1081 GGACGCGTTTCATCCAGGAGAAGCCGCGAATGTTGTCATCGGTAGTCGATCTTTTCAGAG 1140
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1155 GGACGCGTTTCATCCAGGAGAAGCTGCGAATGTTGTCATCGGTAGTCGATCTTTTCAGAG 1214
Query 1141 AGAATCTGCTTCTGATGCTCATCCTTATGATATCCAGCAGCTTGCTCTGCTCTAGTTG 1198
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1215 AGAATCTGCTTCTGATGCTCATCCTTATGATATCCAGCAGCTTGCTCGGCTCTA-TTG 1271
> AT5G45670.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr5:18528494-18530450 FORWARD LENGTH=1481
Length=1481
Score = 874 bits (473), Expect = 0.0
Identities = 862/1049 (82%), Gaps = 30/1049 (3%)
Strand=Plus/Plus
Query 161 AACATTGCTATGGGTGA-CCCAATAGCACCATGTTACTTCATATTCGGTGACTCTTTGGT 219
|||||||||| | |||| ||| || |||||||||||||||||||| ||||||||||||||
Sbjct 161 AACATTGCTAAGAGTGATCCC-ATTGCACCATGTTACTTCATATTTGGTGACTCTTTGGT 219
Query 220 TGATAGTGGAAACAACAATCGGCTTAC-CTCTTTAGCAAGAGCTAATTACTTCCCTTACG 278
||||| ||| ||||| |||| |||| | || ||||| |||||||||||||| |||||||
Sbjct 220 TGATAATGGCAACAATAATCAGCTT-CAGTCATTAGCTAGAGCTAATTACTTTCCTTACG 278
Query 279 GTATCGAC-TTCCAGTTCGGTCCAACCGGCCGGTTCT-CCAACGGAAAAACCACCGTCGA 336
|||| ||| || | | |||||||||||| ||||| | |||||| |||||| |||||
Sbjct 279 GTATTGACTTTGCTG-CCGGTCCAACCGGTCGGTT-TAGCAACGGCTTAACCACTGTCGA 336
Query 337 TGTCATCAC-CGAGCTTCTT-GGTTTCGATGACTACATTACACCGTATTCCGAAGCAAGG 394
||| ||| | | ||||| || |||||||| |||||||||||||| || | |||||
Sbjct 337 TGTTATCGCTC-AGCTT-TTGGGTTTCGAGGACTACATTACACCTTACGCTTCTGCAAGA 394
Query 395 GGAGAAGATATCCTGAGAGGAGTAAACTACGCTTCTGCAGCTGCCGGAATACGAGAAGAA 454
||| |||| || || ||||||| ||||| ||||| || ||||||||||| ||||| |||
Sbjct 395 GGACAAGACATTCTCCGAGGAGTTAACTATGCTTCCGCTGCTGCCGGAATCCGAGACGAA 454
Query 455 ACTGGCCGTCAATTGGGAGCTAGAATAACATTTGCAGGGCAAGTAGCTAATCATGTAAAC 514
|| ||| | |||||||||| | ||||| ||||||||||||||||||| ||||| || |||
Sbjct 455 ACCGGCAGACAATTGGGAGGTCGAATAGCATTTGCAGGGCAAGTAGCAAATCACGTGAAC 514
Query 515 ACTGTGTCACAAGTTGTGAACATACTTGGAGA-CGAGAATGAAG-CTGCTAATTACCTAA 572
|||||||||||||| |||||||||||||| || | | || |||| || | |||||||| |
Sbjct 515 ACTGTGTCACAAGTAGTGAACATACTTGGTGATC-AAAACGAAGCCT-CGAATTACCTCA 572
Query 573 GCAAATGCATCTACTCAATCGGGTTAGGCAGTAACGACTATCTCAATAACTATTTTATGC 632
|||||||||| ||||| ||||| |||||||||||||| ||||| || ||||| || ||||
Sbjct 573 GCAAATGCATTTACTCTATCGGATTAGGCAGTAACGATTATCTTAACAACTACTTCATGC 632
Query 633 CT-GTTTATTACTCCACTGGGAGCCAGTACTCCCCGGATTCCTATGCCAACGACCTCATA 691
|| ||| |||||| || || | ||||| |||||| || ||||||||| |||| ||| |
Sbjct 633 CTACTTT-TTACTCTACCGGTAACCAGTTCTCCCCCGAATCCTATGCCGACGATCTCGTT 691
Query 692 AACCGCTACACCGAGCAACTCCGGATAATGTATAACAACGGAGCGAGGAAGTTTGCGTTA 751
||| |||||||| |||||| || || |||||| ||| ||||||||||||||||||||
Sbjct 692 GCCCGTTACACCGAACAACTCAGGGTACTGTATACCAATGGAGCGAGGAAGTTTGCGTT- 750
Query 752 G-TTGGTA-TTGGCGCAATTGGATGCAGTCCAAATGAGCTGGCTCAAAACAGTAGAGACG 809
| | || | | || ||||| || ||||| || || ||||| ||||||||||| |||||||
Sbjct 751 GATAGG-AGTCGGGGCAATCGGTTGCAGCCCGAACGAGCTAGCTCAAAACAGCAGAGACG 809
Query 810 G-GGTAACTTGTGACGAAAGGATCAATTCCGCAAACAGAATCTTCAACAGTAAGCTTGTG 868
| | ||| ||||||||||| ||||| || || ||||||||||| ||||| || || |
Sbjct 810 GAAG-AACGTGTGACGAAAGAATCAACTCAGCGAACAGAATCTTTAACAGCAAACTCATA 868
Query 869 TCTCTGGTTGATC-ATTTCAATCAAAACACACCAGGCGCCAAGTTCACTTACATTAATGC 927
||| | || || | ||| || || |||||||||| || || ||||||||||| || ||
Sbjct 869 TCTATAGTCGA-CGCTTTTAACCAGAACACACCAGATGCAAAATTCACTTACATCAACGC 927
Query 928 TTATGGTATCTTCCAAGACA-TGGTAGCTAATCCTTCTCGCTATGGGTTTAGGGTTACAA 986
|||||| ||||||||||||| | || | || ||| ||||||| |||||||| || ||||
Sbjct 928 TTATGGCATCTTCCAAGACATTATTA-CAAACCCTGCTCGCTACGGGTTTAGAGTGACAA 986
Query 987 ACGCGGGATGTTGTGGAGTTGGGAGGAACAATGGACAGATAACTTGTCTCCCGGGTCAAG 1046
| || |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 987 ATGCAGGATGTTGTGGAGTTGGGAGGAACAATGGACAGATAACTTGTCTTCCAGGTCAAG 1046
Query 1047 CTCCATGTCTGAACAGGGACGAGTTTGTGTTCTGGGACGCGTTTCATCCAGGAGAAGCCG 1106
| |||||||| || ||| | |||| |||||| ||||| ||||||||||| || ||||| |
Sbjct 1047 CACCATGTCTAAATAGGAATGAGTATGTGTTTTGGGATGCGTTTCATCCCGGTGAAGCTG 1106
Query 1107 CGAATGTTGTCATCGGTAGTCGATCTTTTCAGAGAGAATCTGCTTCTGATGCTCATCCTT 1166
||||| |||| || || || ||||||||| || ||||| |||||||||||||||||||||
Sbjct 1107 CGAATATTGTTATTGGAAGACGATCTTTTAAGCGAGAAGCTGCTTCTGATGCTCATCCTT 1166
Query 1167 ATGATATCCAGCAGCTTGC-TCTGCTCTA 1194
||||||| |||||||| || ||| |||||
Sbjct 1167 ATGATATTCAGCAGCTAGCATCT-CTCTA 1194
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68824947195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5