BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492977
Length=3514
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18820.1 | Symbols: | AAA-type ATPase family protein | chr4... 2490 0.0
AT5G45720.1 | Symbols: | AAA-type ATPase family protein | chr5... 191 4e-47
> AT4G18820.1 | Symbols: | AAA-type ATPase family protein | chr4:10330371-10334268
FORWARD LENGTH=3472
Length=3472
Score = 2490 bits (1348), Expect = 0.0
Identities = 1486/1553 (96%), Gaps = 8/1553 (1%)
Strand=Plus/Plus
Query 449 ATAGTGGTAGGAGAGTTAAGAGAGATGAATCTAGTAGAAAGAGTTATAGAATTGGGGATG 508
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 449 ATAGTGGTAGGAGAGTTAAGAGAGAGGAATCTAGTAGAAAGAGTTATAGAATTGGGGATG 508
Query 509 ATTATCAAAATGTTAATGAGGTTGTTTCTCATGGTTCGGGATCAAAAGCTAGTAGGAGGC 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 509 ATTATCAAAATGTTAATGAGGTTGTTTCTCATGGTTCGGGATCAAAAGCTAGTAGGAGGC 568
Query 569 TTAGTAGGGTTAATGATGCTATTGTTAAGACATTGTCTGATCAGTTAAATGAGGTTGTTG 628
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 569 TTAGTAGGGTTAATGATGCTATGGTTAAGACATTGTCTGATCAGTTAAATGAGGTTGTTG 628
Query 629 TGGGTGATAGTGATGATGTGGTTTCATCTAATGTTCGTCCACGGGTTAGGTAT---GGAG 685
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 629 TTGGTGATAGTGATGATGTGGTTTCATCTAATGTTCGTCCACGGGTTAGGTATGGAGGAG 688
Query 686 GTGGTGGTGGTAGTAATACTCGGGGATGTGCGGGTGGAATGAGTCGGCCTAAAAGACGGA 745
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 689 GTGGTGGTGGTGGTAATACTCGGGGATGTGCGGGTGGAATGAGTCGGCCTAAAAGACGGA 748
Query 746 AGTTTAGAGGGACGAGGAGAGTTCGGGGTAAGAGTAGAGATACTGGTGGTGGTAAGAGTG 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 749 AGTTTAGAGGGACGAGGAGAGTTCGGGGTAAGAGTAGAGATACTGGTGGTGGTAAGAGTG 808
Query 806 AGATGTCTGTTGCTTCAAACACATTGCCTCAAGGTGAGAAGCATGAGGGAGAAAAGGAGG 865
|||||||||||||||| |||||||||||||||| |||||||||||| |||||||| ||||
Sbjct 809 AGATGTCTGTTGCTTCTAACACATTGCCTCAAGTTGAGAAGCATGATGGAGAAAAAGAGG 868
Query 866 GATTTGGGGAACAGAACATGACTAAA-GCTTGTGGGATTCCGTTTAATTGGTCGAGAATT 924
|||||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||
Sbjct 869 GATTTGGGGAACAGAACATGAC-AAAGGCTTGTGGGATTCCATTTAATTGGTCAAGAATT 927
Query 925 CATCACCGAGGGAAAACTTTTCTCGATAAGGCGGGTAGGAGCTTGTCTTGTGGTATGTCT 984
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 928 CATCACCGAGGGAAAACTTTTCTTGATAAGGCGGGTAGGAGTTTGTCTTGTGGTATGTCT 987
Query 985 GATTC-AAA--AGGTAGGAAAGGTGAAACCAATGAGAGAAATGGTTCTGATATGATGATG 1041
||||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 988 GATTCGAAAGGTGGTAGGAAAGGTGAAACTAATGAGAGAAATGGTTCTGATAAGATGATG 1047
Query 1042 ATACAATCTGATGATGACTCAAGCTCCTTTATCCGCTCTGACGGTGAAGCACTTCCCTTA 1101
|||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||
Sbjct 1048 ATACAATCTGATGATGACTCAAGCTCTTTTATCGGCTCTGATGGTGAAGCACTTCCTTTA 1107
Query 1102 CTAGTTGATAGTGCAGAGAATGATGGTTGGGTGCACGATTACTCGGGGGAGCTAGGGATC 1161
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1108 CTAGTTGATAGTGGAGAGAATGATGGTTGGGTGCACGATTACTCGGGGGAGCTAGGTATT 1167
Query 1162 TTTGCAGACAGTCTGCTCAAGAACGATGAAGATTCTGACCTTGCTTCAGAAGGAAGGTCA 1221
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1168 TTTGCAGACAGTCTGCTCAAGAACGATGAGGATTCTGACCTTGCTTCAGAAGGAAGGTCA 1227
Query 1222 GGGGAGAAAAGACACAAAAAGAAGAGTCATGTAAATGCTCGGCATCGACATCAGCAACAA 1281
|||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 1228 GGGGAGAAAAAACACAAAAAGAAGAGCCATGTAAATGCTCGGCATCGACATCGGCAACAG 1287
Query 1282 CATCAGAGTCTAACGGAAAAATACACGCCTAAAACATTCCGGGATCTCCTTGGTCAGAAT 1341
||||||||||| || ||||||||||| |||||||||||||||||||| || || ||||||
Sbjct 1288 CATCAGAGTCTTACTGAAAAATACACACCTAAAACATTCCGGGATCTTCTGGGGCAGAAT 1347
Query 1342 CTGGTGGTACAAGCTCTTTCTAATGCAGTTGCTAGACGAAAGCTTGGACTTTTGTATGTC 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1348 CTGGTGGTACAAGCTCTTTCTAATGCAGTTGCTAGACGAAAGCTTGGACTTTTGTATGTC 1407
Query 1402 TTCCACGGTCCAAATGGAACCGGAAAGACCTCTTGCGCTCGGATATTTGCAAGGGCTTTG 1461
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1408 TTCCACGGTCCAAATGGAACCGGAAAGACCTCTTGCGCTAGGATATTTGCAAGGGCTTTG 1467
Query 1462 AACTGTCATTCCATGGAACAACCAAAGCCTTGTGGTACTTGCAGTTCTTGTGTTTCACAT 1521
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1468 AACTGTCATTCCATGGAACAACCAAAGCCTTGTGGCACTTGCAGTTCTTGTGTTTCACAT 1527
Query 1522 GATATGGGTAAAAGCTGGAACATTCGAGAAGTGGGTCCTGTCGGGAACTATGACTTTGAG 1581
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1528 GATATGGGTAAAAGCTGGAACATTCGGGAAGTGGGTCCTGTTGGGAACTATGACTTTGAG 1587
Query 1582 AACATCATGGATTTACTCGATGGTAATGTGATGGTTTCGTCTCAGTCACCTCGGGTGTTC 1641
|| || ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1588 AAAATAATGGATTTACTTGATGGTAATGTGATGGTTTCATCTCAGTCCCCTCGGGTGTTC 1647
Query 1642 ATATTTGATGATTGTGATACCTTGTCATCTGATTGTTGGAATGCGCTGTCCAAAGTAGTG 1701
|||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||
Sbjct 1648 ATATTTGATGATTGTGATACTTTGTCATCTGATTGTTGGAATGCGTTGTCCAAAGTGGTG 1707
Query 1702 GATCGAGCAGCCCCACGTCGGGTAGTCTTTATACTCGTGTGTTCAAGTCTTGATGTACTG 1761
||||||||||| ||||||| ||||||||||| ||||| ||||| ||||||||||| ||
Sbjct 1708 GATCGAGCAGCGCCACGTCATGTAGTCTTTATCCTCGTCTGTTCGAGTCTTGATGTTTTG 1767
Query 1762 CCTCATGTGATCATATCGAGGTGTCAGAAATTCTTTTTCCCGAAACTCAAGGACGCGGAT 1821
||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||
Sbjct 1768 CCTCATGTGATCATATCTAGGTGCCAGAAATTCTTTTTCCCGAAACTGAAGGACGCAGAT 1827
Query 1822 ATAGTTTACTCATTGCAATGTATTGCATCAAAGGAAAAGATTGAGATAGATAAAGATGCA 1881
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 1828 ATAGTTTACTCATTGCAATGGATTGCATCAAAGGAAGAGATTGAGATAGATAAAGATGCA 1887
Query 1882 TTGAAGCTTATTGCTTCAAGATCAGATGGTTCATTAAGAGATGCTGAGATGACTCTTGAA 1941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 TTGAAGCTTATTGCTTCAAGATCAGATGGTTCATTAAGAGATGCTGAGATGACTCTTGAA 1947
Query 1942 CAGCTGAGTTTGTTAGGACAGAGGATCTCTGTTCCTTTAGTTCAGGAACTGGT 1994
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1948 CAGCTGAGTTTGTTAGGACAGAGGATCTCTGTTCCTTTAGTTCAGGAACTGGT 2000
Score = 2290 bits (1240), Expect = 0.0
Identities = 1407/1486 (95%), Gaps = 18/1486 (1%)
Strand=Plus/Plus
Query 2035 GTTGGGCTTGTTTCTGATGAGAAATTAGTGGATCTTCTTGATTTAGCTTTATCTGCAGAT 2094
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GTTGGGCTTGTTTCTGATGAAAAATTAGTGGATCTTCTTGATTTAGCTTTATCTGCAGAT 2058
Query 2095 ACTGTAAATACTGTGAAGAATCTGAGAACAATAATGGAAACAAGTGTAGAACCATTGGCT 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2059 ACTGTAAATACTGTGAAGAATCTGAGAACAATAATGGAAACAAGTGTAGAACCATTGGCT 2118
Query 2155 TTAATGTCTCAGCTTGCAACGGTCATAACCGATATTCTTGCTGGTAGTTATGATTTCACT 2214
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2119 TTAATGTCTCAGCTTGCAACGGTCATAACTGATATTCTTGCTGGTAGTTATGATTTCACT 2178
Query 2215 AAAGAT-AGGCATAAAAGAAAGTTTTTTCGACGGCAACCATTACCTAAAGAAGATATGGA 2273
|||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2179 AAAGATCA-GCATAAAAGAAAGTTTTTTCGACGACAACCATTACCTAAAGAAGATATGGA 2237
Query 2274 GAAACTGAGACAGGCACTTAAGACATTATCCGAGGCAGAGAAACAGCTGAGAGTATCAAA 2333
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2238 GAAACTGAGACAGGCACTTAAGACGTTATCAGAGGCAGAGAAACAGCTGAGAGTATCAAA 2297
Query 2334 CGACAAACTGACTTGGCTCACAGCCGCGTTGCTTCAATTGGCTCCTGATCAGAACTATCT 2393
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2298 CGATAAACTGACTTGGCTCACAGCCGCGTTGCTTCAATTGGCTCCTGATCAGAACTATCT 2357
Query 2394 GCTTCAACGTTCGTCCACTGCAGACAATAGAGGTAGAGAAAGCTCAGATCACCACCTGGA 2453
|||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||
Sbjct 2358 GCTTCAACGTTCGTCCACTGCAGACACTGGAGGTAGAGAAAGCTCAGATCACCATCTGGA 2417
Query 2454 TCCTTCTAGCGATGCAGCAGGTGGAAGAAGTTCTGGATTGGACAGAAGGAGAGGAGATAG 2513
|||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 2418 TCCTTCTAGCGATGCAGCTGGTGGAAGAAGTTCTGGTTTGGACAGAAGAAGAGGTGATAG 2477
Query 2514 TAGGAAAAACCAACCCGCTGTTGAAGAAATTTGGTTAGAGGTTATCGAGAAGCTTCGAGT 2573
||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2478 TAGAAAAAACCGACCCGCTGTTGAAGAAATTTGGTTAGAGGTTATTGAGAAGCTTCGAGT 2537
Query 2574 CAACGGTTTGAGAGAGTTTCTTTATAAAGAAGGAAGAATCGTCTCTCTTAATCTCGGATC 2633
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2538 TAACGGTTTGAGAGAGTTTCTTTATAAAGAAGGAAGAATCGTCTCTCTTAATCTCGGATC 2597
Query 2634 AGCTCCTACTGTACATCTAATGTTCTCTTCGCCGTTAACCAAATCTACGGCTGAGAAATT 2693
|||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct 2598 AGCTCCTACTGTGCATCTAATGTTCAGTTCTCCGTTAACCAAATCCACGGCTGAGAAATT 2657
Query 2694 CCGTGGCCATATTATGCAAGCGTTTGAGGCGGTTCTTGAGTCTCCTGTCACTATAGAGAT 2753
||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 2658 CCGAAGCCATATTATGCAAGCGTTTGAGGCAGTTCTTGAGTCACCTGTCACAATAGAGAT 2717
Query 2754 CAGATGCGAGACAAAGAAAGACCCAAGAAACAACGTGCATCATCATCATCAGCACCCACC 2813
||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||| |
Sbjct 2718 CAGATGCGAGACAAAAAAAGACCCGAGAAACAACGTGCATCATCATCATCATCACCCAAC 2777
Query 2814 TGTGAAAGACAAGAGCCTGCCACAATCTTTAGCACTCATTGGCCACGATTACAACATCGA 2873
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2778 TGTGAAAGACAAAAGCCTGCCACAATCTTTAGCACTCATTGGCCATGATTACAACATCGA 2837
Query 2874 TGGAAGTGGAAGAAGTGAGATAGTTGAAGTTACTGAATCTAACGGACAAAGACGACAACA 2933
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 2838 TGGAAGTGGAAGAAGTGAGATAGTTGAAGTTACTGAATCTAATGGACAAAGACG---ACA 2894
Query 2934 ACAAGAACAGAAGCAGCAGGTAGAGGAGAGGACAGAGCGAGTTGGTTCTTCTGCTTTAGC 2993
|| |||||||||| |||| ||||||||||||||||| ||||||||| ||||| |||||
Sbjct 2895 AC---AACAGAAGCAACAGGAAGAGGAGAGGACAGAGCCAGTTGGTTCCTCTGCGTTAGC 2951
Query 2994 CCGTGCTAGAAGGAAACATTTGGAAGCAAGCCAGAGTCAGAATCAGAGCCAAAGCATTGT 3053
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2952 CCGAGCTAGAAGGAAACATTTGGAAGCAAGCCAGAGTCAGAACCAGAGCCAAAGCATTGT 3011
Query 3054 GAGAGGTAAGGTCTCGTTGGCTCATGTGATTCAGCAAGCTGACGGATGCACACTCCAGAA 3113
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3012 GAGAGGTAAGGTCTCGTTGGCTCATGTGATTCAGCAAGCTGACGGATGCTCACTCCAGAA 3071
Query 3114 CGGTTGGTCTAAACGCAAGGCTGTGTCTATCGCCGAGAAGCTGGAACAAGAAAATCTGAG 3173
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3072 CGGTTGGTCTAAACGCAAGGCCGTGTCTATCGCCGAGAAGCTGGAACAAGAAAATCTGAG 3131
Query 3174 ACTTGAACCAAGATCAAGAAGCTTGTTATGCTGGAAATCCTCAAGAGGCACACGTCGCAA 3233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3132 ACTTGAACCAAGATCAAGAAGCTTGTTATGCTGGAAATCCTCAAGAGGCACACGTCGCAA 3191
Query 3234 GGCCACGAGGTTGAAGGTGAGAACAAGAAGGGCGAGACCACATTCGTTA-TTGAAGCTCG 3292
||||||||||||||||||||||||||||||||| ||||||||| ||||| || |||||||
Sbjct 3192 GGCCACGAGGTTGAAGGTGAGAACAAGAAGGGCAAGACCACATACGTTACTT-AAGCTCG 3250
Query 3293 TGTCGTGCGGGAAATGTCTGTCAACGAGATCTCCAACAAGATAAAGGCTTTTGTTCTTTG 3352
|||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||| ||
Sbjct 3251 TGTCGTGCGGCAAATGCCTGTCTACGAGATCTCCAACAAGATAAAGGCTTTAATTCTCTG 3310
Query 3353 ATCAATCATACGCAGATTTTACTGTAATTTTAATCAATGTAGGCTTT---CTTTGCAATT 3409
||| |||||||||||||||||||||| ||| ||||||||||| |||| ||||||| ||
Sbjct 3311 ATCGATCATACGCAGATTTTACTGTAGTTTCAATCAATGTAG-CTTTTTTCTTTGCA-TT 3368
Query 3410 TTTTCAATCATTCTTACCACCAA-TAAATGGATTAGTTCTAACACTTCAAAGTCATTCGT 3468
|||| |||| |||||||||| || ||||||||||| || |||| ||||||| |||||||
Sbjct 3369 TTTT-AATCTTTCTTACCACAAAATAAATGGATTAATT-TAACTCTTCAAAACCATTCGT 3426
Query 3469 AAGAAAGATCTTTATTAATGTAGATGCATCAAGAACTGCGTTATGT 3514
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3427 AAGAGAGATCTTTATTAATGTAGATGCATCAAGAACTGCGTTATGT 3472
Score = 667 bits (361), Expect = 0.0
Identities = 390/404 (97%), Gaps = 2/404 (0%)
Strand=Plus/Plus
Query 1 ATGACGACGACGACGACTACTACGACAAGGGTTGCTTCTTCTTCTTCAACACGGAATAAT 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1 ATGACGACGACGACTACTACTACGACAAGGGTTGCTTCTTCTTCTTCAACACGGAACAAT 60
Query 61 CGAATTCTGAAAGATGCAAATGGAGATATCGGTGAGCATCTTCGTAACCACATCCATTTA 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 61 CGAATTCTGAAAGATGCAAATGGAGATATCGGTGAGCATCTTCGTAACCATATCCATTTA 120
Query 121 ACCAATTGTATTCATTTGAAGAACCATATGCATAAGCAGAGTCCTGTTTTAACTGACCGT 180
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 121 ACGAATTGTATTCATTTGAAGAACAATATGCATAAGCAGAGTCCTGTTTTAACTGACCGT 180
Query 181 GCCTTAATGAGAGACCTCATTGTTCTCCAAAGGTCACGGTCACTTAGAGATCCTTCCGCG 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct 181 GCCTTAATGAGAGACCTCATTGTTCTCCAAAGGTCACGGTCTCTTAGAGATCCATCTGCG 240
Query 241 AGCCCTCCTGCTTGGAACACGCCTCCTTCTGTTGTGGATTTGCTTCCTAAGAAAGGTGAT 300
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 241 AGCCCTCCTGCTTGGAACACGCCTCCTTCTGTTGTGGATTTGCTTCCGAAGAAAGGAGAT 300
Query 301 CTTGTGGAAGGAGGAAGAAGATCTGTTGATCATAA-GAAGTCTAGTCGTAGGTTGTCTGC 359
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 301 CTTGTGGAAGGAGGAAGAAGATCTGTTGATT-TAAAGAAGTCTAGTCGTAGGTTGTCTGC 359
Query 360 TTTGAGTGGTTCTTCACCTGTTGTGAACTTTGGGACATCTAAAG 403
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct 360 TTTGAGTGGTTCTTCACCTGTTGTCAACTTTGGGACATCTAAAG 403
> AT5G45720.1 | Symbols: | AAA-type ATPase family protein | chr5:18543193-18547129
REVERSE LENGTH=3546
Length=3546
Score = 191 bits (103), Expect = 4e-47
Identities = 231/289 (80%), Gaps = 24/289 (8%)
Strand=Plus/Plus
Query 738 AAGACGGAAGTTTAGAGGGACGAGGAGAGTT---CGGG--GT-AAGAGT-AGAGATACTG 790
||||||||||||||||||||||||||||| |||| || || || ||||| | ||
Sbjct 1049 AAGACGGAAGTTTAGAGGGACGAGGAGAGCGGGACGGGCCGTTAAT-GTTAGAGACAATG 1107
Query 791 GTGGTGGTAA-GAG--TGAGATGTCTGTTGCTTCAAACACATTGCCTCAAGGTGAGAAGC 847
|| |||||| ||| |||||||||| ||||||| ||| || |||||| |||||||||
Sbjct 1108 CTGCTGGTAATGAGAGTGAGATGTCTATTGCTTCTAACTCAGTGCCTCGTGGTGAGAAGT 1167
Query 848 ATGAGGGAGAA-AAGGAGGGATTTGG--G-GA-ACAGAACATGA-C-TAAAGCTTGTGGG 900
||||||||||| ||||||| | || | || | |||||| || | | | | ||||||
Sbjct 1168 ATGAGGGAGAAGAAGGAGG-AGGAGGAAGAGATAGAGAACA-GAACATGA-G-TTGTGGA 1223
Query 901 ATTCCGTTTAATTGGTCGAGAATTCATCACCGAGGGAAAACTTTTCTCGATA-AGGCGGG 959
|| |||||||||||||| ||||||||||| |||| ||||||||||| |||| || | ||
Sbjct 1224 ATACCGTTTAATTGGTCAAGAATTCATCATAGAGGCAAAACTTTTCTTGATATAG-CTGG 1282
Query 960 TAGGAGCTTGTCTTGTGGTATGTCTGATTCAAAAGGTAGGAAAGGTGAA 1008
|||||| || |||||||| || ||||||||||| || |||||||| |||
Sbjct 1283 TAGGAGTTTATCTTGTGGAATATCTGATTCAAAGGGAAGGAAAGGCGAA 1331
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 174932130241
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5