BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492991 Length=708 Score E Sequences producing significant alignments: (Bits) Value AT4G18680.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1011 0.0 AT4G18690.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 601 3e-171 > AT4G18680.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18690.1); Has 361 Blast hits to 361 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 353; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:10281033-10281740 FORWARD LENGTH=708 Length=708 Score = 1011 bits (547), Expect = 0.0 Identities = 656/709 (93%), Gaps = 5/709 (1%) Strand=Plus/Plus Query 1 ATGGGTTTACAAACTAAACACATAGAGGATCTCAAAGAAGCACTCATGTGTCAACAAAAC 60 ||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct 1 ATGAGTTTACAAACTAAACACATAGATGATCTCAAAGAAGCACTCATGTGTCAACGAAAC 60 Query 61 AACGATCACAAAGTCGAAGACCTAGTTGGTAAAATCGTCAATGACTTCCAAACATATGCA 120 |||||| ||||| |||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct 61 AACGATGACAAACTCGAAGACCTCGTTGGTAAAATCGTCAATGACTACCACACATATGCG 120 Query 121 AGAAAACGATCAGAGCTCTCGCACCGATGCTGCGCTAACTACTTTGCACCGTCATGGAAC 180 |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| Sbjct 121 GGAAAACGATCAGAGCTCTCGTACCGATGCTGCGCTCACTACTTTGCACCGTCGTGGAAC 180 Query 181 TCTCCTATAGAGAACAGTATGCTATGGATGGGAGGATGTCGTCCTTCTTCTTTCATTAGA 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ACTCCTATAGAGAACAGTATGCTATGGATGGGAGGATGTCGTCCTTCTTCTTTCATTAGA 240 Query 241 CTTATATACGCGCTTTGTGGATCCCAGGCCGAAACTCTGCTTACTCAAAATCTTCTTCAT 300 ||||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||| | Sbjct 241 CTTATATACGCACTTTGTGGATCCCAGGCCGAAACTCAGCTTTCTCAATATCTTCTTAAG 300 Query 301 ATCGATGAAAACTTTGACGTAAACCATGGTGGTTTCATGAGTGATCTTACCGCGACACAG 360 |||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ATCGATGACGACTTCGATATAAACCATGGTGGTTTCATGAGTGATCTTACCGCGACACAG 360 Query 361 CTTGAAAAAATCAATGAGTTGCATATGAAAGTAATAAAGAAAGAAGACAAGATTACGAAG 420 |||| |||| ||||||| |||||| || | |||||||||||||||||||||||||||||| Sbjct 361 CTTGGAAAACTCAATGACTTGCATTTGGAGGTAATAAAGAAAGAAGACAAGATTACGAAG 420 Query 421 ACATCTGCGAATTTTCAAGACGATGTGGCGGATATGCCAATCGCGGATGTGGTGGTGCAT 480 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 421 ACATCTGCGAATTTTCAAGACGATGTGGCGGATTTGCCAATCGCGGATGTGGTG---CAT 477 Query 481 GGTGATGCAGCGGTGGAGGATGCTTTGGATAAGCATGAAGAGGGTATGGCGGTTTTACTG 540 | ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 478 GCTGATGTAGCGGTGGAGGATGCTTTGGATAAGCATGAAGAGGGAATGGCGGTTTTACTG 537 Query 541 GCGGAGGCTGATAAACTGAGGTTTGAGACGCTTAGGAAGATTGTGGAGGTTATGACTCCG 600 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct 538 GCGGAGGCTGATAAACTGAGGTTTGAGACGCTTAGGAAGATTGTGGACGTTGTCACACCG 597 Query 601 GTTCAAGCGGCGGAGTTTTTGCTTGCCGGGAAAAGATTACA-CTTTTCGTTGCACGACCG 659 ||||||||| |||||||||||||||||| ||||||||||| || | ||||||||||||| Sbjct 598 CTTCAAGCGGTGGAGTTTTTGCTTGCCGGAAAAAGATTACAGCTGT-CGTTGCACGACCG 656 Query 660 GGGAAGAGCTAGAGCAGATGTTTGTGGAGGAGTAGGGGACGACGCCGTC 708 |||||||| |||||||||||||||||||||||| |||| || ||| ||| Sbjct 657 GGGAAGAGTTAGAGCAGATGTTTGTGGAGGAGTGGGGGGCGCCGCTGTC 705 > AT4G18690.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18680.1); Has 522 Blast hits to 522 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 513; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:10282762-10283803 FORWARD LENGTH=1042 Length=1042 Score = 601 bits (325), Expect = 3e-171 Identities = 573/689 (83%), Gaps = 32/689 (5%) Strand=Plus/Plus Query 14 CTAAACACATAGAGGATCTCAAAGAAGCACTCATGTGTCA---A-CAAAACAACGATCAC 69 |||||||||||| ||||||||||||||||||||| |||| | | ||| || |||||| Sbjct 103 CTAAACACATAGTTGATCTCAAAGAAGCACTCATGAGTCATCGATCCAAAGAA-GATCAC 161 Query 70 AAAG-TCGAAGACCTAGTTGGTAAAATCGTCAATGACTTCCAAACATATGCAAGAAAA-C 127 ||| | ||||| || |||||||||||||||||||||||||||| ||| | ||||| | Sbjct 162 -AAGCTTGAAGAACTCGTTGGTAAAATCGTCAATGACTTCCAAAAATACACC-GAAAAAC 219 Query 128 GATCAGAGCTCTCGCACCGATGCTGCGCTAA-CTACTTTGCACCGTCATGGAACTCTCCT 186 |||| |||||||| | |||| ||||| | || ||||||||||||||| |||||||||||| Sbjct 220 GATCTGAGCTCTCTCGCCGAAGCTGCTC-AAGCTACTTTGCACCGTCGTGGAACTCTCCT 278 Query 187 ATAGAGAACAGTATGCTATGGATGGGAGGATGTCGTCCTTCTTCTTTCATTAGACTTATA 246 |||||||| || | ||||||||||||||||||||||| || |||||||||||| |||| Sbjct 279 CTAGAGAACGGTTTACTATGGATGGGAGGATGTCGTCCATCGTCTTTCATTAGAGTTATT 338 Query 247 TACGCGCTTTGTGGATCCCAGGCCGAAACTCTGCTTACTCAAAATCTTCTTCATATCGAT 306 ||| | |||||||||||||| |||||||| | |||| |||| ||||||| | |||||| Sbjct 339 TACTCTCTTTGTGGATCCCAAGCCGAAACGCAGCTTTCTCAGTATCTTCTAAAGATCGAT 398 Query 307 GAAAACTTT-GACGTAAACCATGGTGGTTTCATGAGTGATCTTACCGCGACACAGCTTGA 365 ||||| | | || |||||||||||||||| |||||||||||| | |||| | ||||||| Sbjct 399 GAAAA-TGTCGAAGTAAACCATGGTGGTTCCATGAGTGATCTAAACGCGTCGCAGCTTGC 457 Query 366 AAAAATCAATGAGTTGCATATGAAAG-TAATAAAGAAAGAAGACAAGATTACGAAGACAT 424 |||||||||||| |||||||| |||| | ||| ||||||| |||||||| || |||| || Sbjct 458 AAAAATCAATGATTTGCATAT-AAAGGTTATAGAGAAAGAGGACAAGATAACAAAGAAAT 516 Query 425 CTGCGAATTTTCAAGACGA-TGTGGCGGATATGCC-A-A----TCGCGG---ATGT---G 471 | |||||||| ||||| || ||| ||||||||||| | | |||||| ||| | Sbjct 517 CGGCGAATTTGCAAGA-GAATGTTGCGGATATGCCTATAGCCATCGCGGCTTATGCCACG 575 Query 472 G--TGG-TGCATGGTGATGCAGCGGTGGAGGATGCTTTGGATAAGCATGAAGAGGGTATG 528 | | | || ||||||| | | |||||| |||||||| |||||| |||| ||||| ||| Sbjct 576 GACTTGATGAATGGTGACGTGGTGGTGGAAGATGCTTTAGATAAGTATGAGGAGGGCATG 635 Query 529 GCGGTTTTACTGGCGGAGGCTGATAAACTGAGGTTTGAGACGCTTAGGAAGATTGTGGAG 588 ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 636 GCGGTTTTAATGGTGGAAGCTGATAAACTGAGGTTTGAGACGCTTAGGAAGATCGTGGAT 695 Query 589 GTTATGACTCCGGTTCAAGCGGCGGAGTTTTTGCTTGCCGGGAAAAGATTACACTTTTCG 648 ||| | || |||||||||||||||||||||||||| || ||||||||||||||| | || Sbjct 696 GTTGTTACGCCGGTTCAAGCGGCGGAGTTTTTGCTCGCAGGGAAAAGATTACACATATCA 755 Query 649 TTGCACGACCGGGGAAGAGCTAGAGCAGA 677 |||||||| ||||||||| ||||| ||| Sbjct 756 TTGCACGAGTGGGGAAGAGTTAGAGAAGA 784 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34309922401 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5