BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492992
Length=2467
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18670.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 1951 0.0
AT4G13340.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 939 0.0
AT3G24480.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 905 0.0
> AT4G18670.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr4:10275462-10278491 REVERSE LENGTH=3030
Length=3030
Score = 1951 bits (1056), Expect = 0.0
Identities = 1268/1367 (93%), Gaps = 28/1367 (2%)
Strand=Plus/Plus
Query 1 ATGAAGACGAAGATGATGATGAAGAAGACGTCTCAGATCTTTGttcttcttttcacattg 60
|||||||||||||||||||||||||| ||||||| |||||||||||||||||| | |
Sbjct 1 ATGAAGACGAAGATGATGATGAAGAACACGTCTCTGATCTTTGTTCTTCTTTT--TA-TC 57
Query 61 ttcttcttcttcacaagcctcactcactctcttccactcactttcaATGGCGATCTCTCA 120
||||||||||||||| || || |||||||| |||| ||||||||||| ||||||||
Sbjct 58 ACCTTCTTCTTCACAAGTATCTCTTACTCTCTTTCACTTACTTTCAATGGAGATCTCTCC 117
Query 121 GACAACGAAGTCCGGCTAATCACACAACGTCAGCTTCTCTACTTCCGTGACGAGTTCGGC 180
||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 118 GACAATGAAGTCCGGCTAATCACACAACGTCAACTTCTCTACTTCCGCGACGAGTTCGGC 177
Query 181 GACCGCGGCGAGAATGTCGTCGTTGATCCATCACTAGTCTTCGAGAATCCACGACTACGA 240
||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||
Sbjct 178 GACCGCGGCGAGAATGTCGACGTTGACCCATCTCTAGTCTTCGAGAATCCACGACTTCGA 237
Query 241 AGTGCTTACATAGCTCTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCAAACAACTTC 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 AATGCTTACATAGCTCTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCAAACAACTTC 297
Query 301 ACAACAAACTGGATCGGTTCTGATGTTTGCAGTTACACCGGAGTTTACTGTGCTCCGGCG 360
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 298 ACAACAAACTGGATCGGTTCTGATGTTTGCAGTTACACCGGCGTTTACTGTGCTCCGGCT 357
Query 361 TTAGATAATCGCCGGATCCGTACCGTCGCCGGAATAGATCTCAATCACGCTGATATTGCT 420
|||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct 358 TTAGATAACCGCCGGATCCGTACCGTCGCCGGAATAGATCTAAACCACGCTGACATTGCT 417
Query 421 GGTTATTTGCCTCAAGAGCTTGGTTTGTTAACAGATCTCGCTTTGTTTCATGTTAATTCA 480
|||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 418 GGTTATCTACCTCAAGAGCTTGGTTTGTTAACAGATCTCGCTTTGTTTCATATTAATTCA 477
Query 481 AACCGGTTTTGTGGAACCGTACCGCATCGGTTTAATCGGCTTAAGCTTTTATTCGAGCTT 540
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 478 AACCGGTTTTGTGGAACCGTACCGCATCGGTTTAACCGTCTTAAGCTTTTATTCGAGCTT 537
Query 541 GATCTCAGTAATAACCGGTTCGCCGGAATATTCCCTACCGTTGTACTCCAGTTGCCGTCG 600
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct 538 GATCTCAGTAATAACCGGTTCGCCGGAATATTCCCTACTGTTGTCCTTCAGTTACCGTCG 597
Query 601 TTGAAGTTTCTGGATCTAAGGTTTAACGAGTTCGAAGGACCTGTGCCTAGAGAGCTCTTC 660
||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct 598 TTGAAGTTTCTGGATCTAAGGTTTAACGAATTCGAAGGACCTGTACCAAGAGAGCTCTTC 657
Query 661 AGCAAAGATCTTGATGCGATTTTCATTAACCATAACCGGTTCCGGTTTGAGTTACCGGAT 720
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 658 AGCAAAGATCTTGATGCGATTTTTATCAACCATAACCGGTTCCGGTTTGAGTTACCGGAT 717
Query 721 AATTTGGGAGATTCTCCGGTTTCCGTTATCGTTGTGGCGAATAATCATTTCCACGGTTGT 780
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 718 AATTTGGGAGATTCTCCGGTTTCCGTTATTGTTGTGGCGAATAATCATTTCCACGGTTGT 777
Query 781 ATTCCGACGAGTTTGGGTGATATGAAGAATCTTGAAGAGATCATTTTTATG-AACAATGG 839
||||||||||||||||||||||||| |||||||||||||||||| || ||| || |||||
Sbjct 778 ATTCCGACGAGTTTGGGTGATATGAGGAATCTTGAAGAGATCATCTTCATGGAA-AATGG 836
Query 840 GTTTGATTCTTGTTTACCGCCGCAGATCGGACGGTTGAAAAACGTAACGGTTTTTGATTT 899
|||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 837 GTTTAATTCTTGTTTACCGTCGCAGATCGGACGGTTGAAAAACGTAACGGTATTTGATTT 896
Query 900 CAGTTTTAACGAACTGGTTGGGTCGTTACCGGCGAGTATTGGCGGGATGGTTTCGTTGGA 959
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 897 CAGTTTTAACGAACTTGTTGGGTCGTTACCGGCGAGTATTGGCGGGATGGTTTCGATGGA 956
Query 960 GCAGTTAAATGTGGCGCATAATAGATTCTCTGGTAGGATTCCGGCGAGTATTTGTCAGTT 1019
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 957 GCAGTTAAATGTGGCGCATAATAGATTCTCTGGTAAGATTCCGGCGACTATTTGTCAGTT 1016
Query 1020 GCCGAGGTTGGAGAATTTCACTTTCAGTTACAATTTCTTCACCGGAGAGCCACCCGTGTG 1079
|||||||||||||||||||||||||||||| ||||||||||| |||||||| || || ||
Sbjct 1017 GCCGAGGTTGGAGAATTTCACTTTCAGTTATAATTTCTTCACTGGAGAGCCGCCGGTTTG 1076
Query 1080 TCTCGGTTTGCCTGGGTTTGATGATCAGCGGAATTGTTTGCCGGCGAGACCTGCGCAGAG 1139
||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1077 TCTTGGGTTGCCTGGGTTTGATGATCGGCGGAATTGTTTGCCGGCGAGACCTGCGCAGAG 1136
Query 1140 ATCTCC-GGGACAATGTGCGGCTTTCTCTTCTCTTCCACCGGTGGATTGTGGTTCATTTG 1198
||| || ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1137 ATCACCAGGG-CAATGTGCGGCTTTCTCTTCTCTTCCGCCGGTGGATTGTGGTTCCTTTG 1195
Query 1199 GATGTGGCCGTTCTACTCGGCCTCCGGTTGTAGTCCCGTCACCGCCGACAACTCCGTCTC 1258
||||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct 1196 GATGTGGTCGTTCTACTCGGCCTCCAGTTGTTGTCCCATCACCGCCTACAACTCCGTCTC 1255
Query 1259 CAGGTGGTTCTCCTCCTTCGCC--------------GTC------T-ACTGTCCCGTCAC 1297
| |||||||||||||||||||| ||| | |||||||||||||
Sbjct 1256 CGGGTGGTTCTCCTCCTTCGCCTTCTATTTCTCCTAGTCCACCGATCACTGTCCCGTCAC 1315
Query 1298 CGCCGACAACACCATCTCCTGGTGGTTCTCCTCCTTCACCGTCTATT 1344
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1316 CGCCGACAACTCCATCTCCTGGTGGTTCTCCTCCTTCACCGTCTATT 1362
Score = 630 bits (341), Expect = 2e-179
Identities = 459/511 (90%), Gaps = 27/511 (5%)
Strand=Plus/Plus
Query 1900 ccaccacctccaccaacgccactacacccccctccgccaccatcac-cccaaccGTGCAT 1958
||||||||||||||||||||| ||||| |||||||||||| ||||| || |||||||||
Sbjct 2257 CCACCACCTCCACCAACGCCAATACACTCCCCTCCGCCACAATCACATCC-ACCGTGCAT 2315
Query 1959 AGAATACTCACCGCCTCCACCTCCAACAGTCCATTACAATCCTCCACCACCACCAACACC 2018
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 2316 AGAATACTCACCACCTCCACCTCCAACAGTCCATTATAATCCTCCACCACCACCATCACC 2375
Query 2019 GGCGCACTACAGTCCTCCACCATCACCACCGGTTTACTACTACAATTCACCTccaccacc 2078
|||||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||
Sbjct 2376 GGCGCACTACAGTCCTCCGCCTTCACCACCAGTTTACTACTACAATTCACCTCCACCTCC 2435
Query 2079 accggctgtccagtacagcccaccacctccaccggtaattcaccacagcccaccaccacc 2138
|||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 2436 ACCGGCTGTCCACTACAGCCCACCACCTCCACCGGTAATACACCACAGCCAACCACCACC 2495
Query 2139 aACTCCAATCTACGAAGGACCACTACCGCCGATTCCCGGAATATCATACGCTTCGCCTCC 2198
| |||||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 2496 ACCTCCAATCTACGAAGGGCCACTACCGCCGATTCCCGGAATATCATACGCATCTCCTCC 2555
Query 2199 GCCGCCTCCCTTCTATTGATTCTTTTTTCAGAATGTTCTCAAA-GGGGTCCCACCACTTA 2257
||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||
Sbjct 2556 GCCGCCTCCCTTCTATTGATTCTTTTT-CAGAATGTTCTCAAAAGGGG-CCCACCACTTA 2613
Query 2258 TGCCAAAACCCGAAGCCGAAACGGTGTCGTGTCGTGTCAATAAC--T---C---TT-A-- 2306
|||||||||||||| |||||||||||||||||||||||||||| | | || |
Sbjct 2614 TGCCAAAACCCGAAAACGAAACGGTGTCGTGTCGTGTCAATAACACTTATCCGATTGATA 2673
Query 2307 ----CA-----C--GGCGTCGTTTTCCCATTTCTTGGAGAGCGAGGTACGTGTCGGTGGT 2355
|| | |||||||||| ||||||||||||||| || |||||||| ||||||
Sbjct 2674 GAAACATGTAACACGGCGTCGTTTGACCATTTCTTGGAGAGAGATGTACGTGTTGGTGGT 2733
Query 2356 TGGGTATTCTCCGAAAGATTTATTTCGGTGA 2386
|||||||||||||||||||||||||||||||
Sbjct 2734 TGGGTATTCTCCGAAAGATTTATTTCGGTGA 2764
Score = 207 bits (112), Expect = 3e-52
Identities = 179/210 (85%), Gaps = 9/210 (4%)
Strand=Plus/Plus
Query 1688 CACCACCTCCGACATACTCTCCATTCCCATCGCCGCCACCTCCTCCGCCGCAAACATACT 1747
|||| |||| |||||| ||||| ||||| | ||||||||||||||||||||||||||||
Sbjct 1994 CACCGCCTCAGACATATTCTCCCTTCCCGCCACCGCCACCTCCTCCGCCGCAAACATACT 2053
Query 1748 ATCCACCGCAGCCAACACCA-C-CAACACCACCGCAAACTCCAATTTACTACACTCCCCC 1805
|||||||||| ||| | ||| | |||| || |||||| ||||||||||| |||||||||
Sbjct 2054 ATCCACCGCAACCATCTCCATCACAAC-CC-CCGCAATCTCCAATTTACGGCACTCCCCC 2111
Query 1806 TCCTTCACCTCCACCTCACTCGCCGTCATCGCCCCAATTTTca-cc--accaccaccagt 1862
|||||| ||| |||| ||| ||||||| |||| |||||| || || |||||||||||
Sbjct 2112 TCCTTCCCCTATACCTTACTTGCCGTCACCGCCTCAATTTGCATCCCCACCACCACCAG- 2170
Query 1863 cccct-actactacagctcaccaccaccac 1891
||||| |||||||||||||||||| |||||
Sbjct 2171 CCCCTTACTACTACAGCTCACCACAACCAC 2200
Score = 189 bits (102), Expect = 1e-46
Identities = 132/146 (90%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 1420 CCATCAACTCCACCAACTCCGATATCACCTGGTCAACATTCACCGCCTGTTATTCCTAGT 1479
||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1690 CCATCAACTCCGCCAACTCCGATATCACCTGGTCAAAATTCACCGCCTATTATTCCTAGT 1749
Query 1480 CCACCGTTCACAAGCCCTTCTCCGCCGTCGTCACCTAGTCCTCCTTCACCGCCTATTATC 1539
||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1750 CCACCGTTCACCGGCCCTTCTCCGCCGTCGTCACCTAGTCCTCCTTTACCGCCTGTTATT 1809
Query 1540 CCCAGTCCGCC-AGGTT-TAGGCCCG 1563
|| ||||| || | || ||||||||
Sbjct 1810 CCTAGTCCTCCCA--TTGTAGGCCCG 1833
Score = 145 bits (78), Expect = 2e-33
Identities = 90/96 (94%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 1294 TCACCGCCGACAACACCATCTCCTGGTGGTTCTCCTCCTTCACCGTCTATTTCTCCTAGT 1353
||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1525 TCATCGCCGACAACACCTTCTCCCGGTGGTTCTCCTCCTTCACCGTCTATTTCTCCTAGT 1584
Query 1354 CCTCCGATCACTGTCCCGTCTCCTCCTTCCACGCCA 1389
|||||||||||||||||||||||||| || || |||
Sbjct 1585 CCTCCGATCACTGTCCCGTCTCCTCCGTCAACCCCA 1620
> AT4G13340.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr4:7758610-7761057 FORWARD LENGTH=2448
Length=2448
Score = 939 bits (508), Expect = 0.0
Identities = 865/1033 (84%), Gaps = 42/1033 (4%)
Strand=Plus/Plus
Query 201 CGTTGATCCATCACTAGTCTTCGAGAATCC-ACGACTACGAAGTGCTTACATAGCTCTTC 259
||||||||| || ||| |||||||||||| | || | |||| |||||| |||||||| |
Sbjct 162 CGTTGATCCTTCTCTAAACTTCGAGAATCCGA-GATTGCGAAATGCTTATATAGCTCTAC 220
Query 260 AAGCTTGGAAACAAGCTATTCTCTCTGATCCAAACAACTTCACAACAAACTGGATCGGTT 319
|||||||||||||||| |||||||||||||||||||| ||||| | || |||||||| |
Sbjct 221 AAGCTTGGAAACAAGCGATTCTCTCTGATCCAAACAATTTCACTTCGAATTGGATCGGAT 280
Query 320 CTGATGTTTGCAGTTACACCGGAGTTTACTGTGCTCCGGCG-TTAGATAATCGCCGGATC 378
| |||| || | ||||||||||||| |||| |||||||| || |||||||| |||
Sbjct 281 CCAATGTCTGTAACTACACCGGAGTTTTCTGTTCTCCGGCGCTT-GATAATCGGAAGATT 339
Query 379 CGTACCGTCGCCGGAATAGATCTCAATCACGCTGATATTGCTGGTTATTTGCCTCAAGAG 438
||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| |||||
Sbjct 340 CGTACCGTCGCCGGAATCGATCTCAATCACGCAGATATCGCTGGTTATTTACCTGAAGAG 399
Query 439 CTTGGTTTGTTAACAGATCTCGCTTTGTTTCATGTTAATTCAAACCGGTTTTGTGGAACC 498
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 400 CTTGGTTTGTTATCAGATCTTGCTTTGTTTCATGTTAATTCAAACCGGTTTTGTGGTACT 459
Query 499 GTACCGCATCGGTTTAATCGGCTTAAGCTTTTATTCGAGCTTGATCTCAGTAATAACCGG 558
||||| || |||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 460 GTACCACACCGGTTTAACCGGCTTAAGCTTTTATTCGAGCTTGATCTTAGTAACAACCGG 519
Query 559 TTCGCCGG-AA-TATTCCCTACCGTTGTACTC-CAGTTGCCGTCGTTGAAGTTTCTGGAT 615
||||| || || | |||| || ||||| || || || ||||||||||||||| | |||
Sbjct 520 TTCGCTGGGAAGT-TTCCG-ACGGTTGT-CTTGCAATTACCGTCGTTGAAGTTTTTAGAT 576
Query 616 CTAAGGTTTAACGAGTTCGAAGGACCTGTGCCTAGAGAGCTCTTCAGCAAAGATCTTGAT 675
|| ||||||| || || |||||| |||| || | |||||| || || |||||||||||
Sbjct 577 CTCCGGTTTAATGAATTTGAAGGAACTGTACCGAAAGAGCTTTTTAGTAAAGATCTTGAC 636
Query 676 GCGATTTTCATTAACCATAACCGGTTCCGGTTTGAGTTACCGGATAATTTGGGAGATTCT 735
||||||||||| ||||||||||||||||||||||| |||||||| ||||| || |||||
Sbjct 637 GCGATTTTCATAAACCATAACCGGTTCCGGTTTGAATTACCGGAGAATTTTGGTGATTCG 696
Query 736 CCGGTTTCCGTTATCGTTGTGGCGAATAATCATTTCCACGGTTGTATTCCGA-CGAGTTT 794
|||||||| ||||| ||| |||||||||| | ||||| |||||| | || | |||| ||
Sbjct 697 CCGGTTTCGGTTATTGTTTTGGCGAATAACCGGTTCCATGGTTGTGTACC-ATCGAGCTT 755
Query 795 GGGTG-ATATGAAGAATCTTGAA-GAGATCATTTTTATGAACAATGGGT-TTGATTCTTG 851
|| || | |||||||||||| || |||||||| || ||||||||||| | || |||||||
Sbjct 756 GG-TGGAGATGAAGAATCTT-AACGAGATCATCTTCATGAACAATGG-TCTTAATTCTTG 812
Query 852 TTTACCGCC-GCAGATCGGACGGTTGAAA-AACGTAACGGTTTTTGATTTCAGTTTTAAC 909
||||||| | | | ||||||||||| ||| ||||| ||||| ||||| ||||||||||
Sbjct 813 TTTACCGTCTG-ATATCGGACGGTT-AAAGAACGTGACGGTGTTTGACGTCAGTTTTAAT 870
Query 910 GAACTGGTTGGGTCGTTACCGGCGAGTATTGGCGGGATGGTTTCGTTGGAGCAG-TTAAA 968
||||| |||||| ||||||||| |||| |||| | |||||||||| |||||||| ||||
Sbjct 871 GAACTTGTTGGGCCGTTACCGGAGAGTGTTGGTGAGATGGTTTCGGTGGAGCAGCTTAA- 929
Query 969 TGTGGCGCATAATA-GATTCTCTGGTAGGATTCCGGCGAGTATTTGTCAGTTGCCGAGG- 1026
|||||||||||||| | || || || | |||||||||||||||||||||||| |||| |
Sbjct 930 TGTGGCGCATAATATG-TTGTCGGGGAAGATTCCGGCGAGTATTTGTCAGTTACCGAAGC 988
Query 1027 TTGGAGAATTTCACTT-TCAGTTACAATTTCTTCACCGGAGA-GCCACCCGTGTGTCTC- 1083
||| |||||||||||| | |||||||||||||| |||||||| || || |||||| |
Sbjct 989 TTG-AGAATTTCACTTAT-AGTTACAATTTCTTTACCGGAGAAGCG-CCTGTGTGTTTGA 1045
Query 1084 GGTTTGCCTGG-GTTTGATGATCAGCGGAATTGTTTGCCGGCGA-GACCTGCGCAGAGAT 1141
|||| ||| || ||||||||||| | | ||||||||||||| || ||||||| ||||| |
Sbjct 1046 GGTT-GCC-GGAGTTTGATGATCGGAGAAATTGTTTGCCGG-GAAGACCTGCTCAGAGGT 1102
Query 1142 CTCC-GGGACAATGTGCGGC-TTTCTCTTCTCTTCCACCGGTGGATTGTGGTTCATTTGG 1199
|||| ||| |||||| || ||| | | ||| ||| ||||| ||||||| || ||| |
Sbjct 1103 CTCCAGGG-CAATGTAAAGCGTTTTTGT-CTCGTCCGCCGGTAAATTGTGGATCGTTTAG 1160
Query 1200 ATGTGGCCGTTCT 1212
||||||||||||
Sbjct 1161 TTGTGGCCGTTCT 1173
> AT3G24480.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr3:8901154-8902638 REVERSE LENGTH=1485
Length=1485
Score = 905 bits (490), Expect = 0.0
Identities = 920/1123 (82%), Gaps = 48/1123 (4%)
Strand=Plus/Plus
Query 114 TCTCTCAGACAACGAAGTCCGGCTAAT-CACACAACGTCAGCTTCTCTACTTCCGTGACG 172
|||||| |||| ||||||| | | || || || ||||| |||||||||| ||| ||||
Sbjct 99 TCTCTCCGACACCGAAGTCAGATTCATCCA-ACGCCGTCAACTTCTCTACTACCGCGACG 157
Query 173 AGTTCGGCGACCGCGGCGAGAATGTCGTC-GTTGATCCATCACTAGTCTTCGAGAATCCA 231
||||||| ||||| || ||||||||| | || |||||||||||| |||||||||||||
Sbjct 158 AGTTCGGTGACCGTGGTGAGAATGTC-ACAGTAGATCCATCACTAATCTTCGAGAATCCG 216
Query 232 CGACTACGAAGTGCTTACATAGCTCTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCA 291
|| || || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 217 CGGCTTCGTAGTGCTTACATAGCTCTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCT 276
Query 292 AACAACT-TCACAACAAACTGGATCGGTTCTGATGTTTGCAGTTACACCGGAGTTTACTG 350
|| || | |||| || |||||||| || |||| || | ||||||||||||| |||
Sbjct 277 AATAA-TATCACTGTTAATTGGATCGGATCCAATGTCTGTAACTACACCGGAGTTTTCTG 335
Query 351 TGCTCCGGCG-TTAGATAATCGCCGGATCCGTACCGTCGCCGGAATAGATCTCAATCACG 409
| || || || ||||| || ||||||||||||||||||||| |||||||| ||||
Sbjct 336 TTCTAAAGCTCTT-GATAACCGGAAGATCCGTACCGTCGCCGGAATCGATCTCAACCACG 394
Query 410 CTGATATTGCTGGTTATTTGCCTCAAGAGCTTGGTTTGTTAACAGATCTCGCTTTGTTTC 469
| ||||| ||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||
Sbjct 395 CCGATATCGCTGGGTATTTACCTGAAGAGCTTGGTTTGTTAACAGATCTAGCTTTGTTTC 454
Query 470 ATGTTAATTCAAACCGGTTTTGTGGAACCGTACCGCATCGGTTTAATCGGCTTAAGCTTT 529
|||||||||| || || || ||||| || || || ||| ||| || | |||||||||||
Sbjct 455 ATGTTAATTCGAATCGATTCTGTGGTACTGTTCCTCATAAGTTCAAGCAGCTTAAGCTTT 514
Query 530 TATTCGAGCTTGATCTCAGTAATAACCGGTTCGCCGGAATA-TT-CCCTACCGTTGTACT 587
| |||||||||||||| ||||| || ||||||||||||| | || ||| || || || ||
Sbjct 515 TGTTCGAGCTTGATCTTAGTAACAATCGGTTCGCCGGAA-AGTTTCCC-ACGGTGGTTCT 572
Query 588 CCAGTTGCCGTCGTTGAAGTTTCTG-GATCTAAGGTTTAACGAGTTCGAAGGA-CCTGTG 645
|| ||||||||||||||||| || ||||| ||||||| ||||| |||||| || ||
Sbjct 573 TCATTTGCCGTCGTTGAAGTT-CTTAGATCTCCGGTTTAATGAGTTTGAAGGAACC-GTA 630
Query 646 CCTAGAGAGCTCTTCAGCAAAGATCTTGATGCGATTTTCATTAACCATAACCGGTTCCGG 705
|| | |||||| || || ||| |||| ||||||||||| || ||||||||||||||||||
Sbjct 631 CCGAAAGAGCTTTTTAGTAAAAATCTAGATGCGATTTTTATAAACCATAACCGGTTCCGG 690
Query 706 TTTGAGTTACCGGATAATTTGGGAGATTCTCCGGTTTCCGTTATCGTTGTGGCGAATAAT 765
|||||||||||||| ||||| || |||||||||||||| ||||| ||| | |||||||||
Sbjct 691 TTTGAGTTACCGGAAAATTTCGGTGATTCTCCGGTTTCGGTTATTGTTCTTGCGAATAAT 750
Query 766 CATTTCCACGGTTGTATTCCGACGAGTTTGGGTG-ATATGAAGAATCTTGAA-GAGATCA 823
|||||||| |||||||||||||||||||||| || | |||||||||||| || ||||| |
Sbjct 751 CATTTCCATGGTTGTATTCCGACGAGTTTGG-TGGAGATGAAGAATCTT-AATGAGATTA 808
Query 824 TTTTTATGAACAATGGGTTTGA-TTCTTGTTTACCGCCGCAGATCGGACGGTTGAAAAAC 882
|||| ||||||||||| ||||| ||||||||||||| || | |||||| ||||||| ||
Sbjct 809 TTTTCATGAACAATGG-TTTGAATTCTTGTTTACCGGCGGATATCGGAAGGTTGAAGAAT 867
Query 883 GTAACGGTTTTTGAT-TTCAGTTTTAACGAACTGGTTGGGTC-GTTACCGGCGAGTATTG 940
|| ||||| |||||| || |||||||| || || ||||| || ||| |||| |||| |||
Sbjct 868 GTGACGGTGTTTGATGTT-AGTTTTAATGAGCTTGTTGG-TCCGTTGCCGGAGAGTGTTG 925
Query 941 GCGGGATGGTTTCG-TTGGAGCAGTTAAATGTGGCGCATAATA-GATTCTCTGGTAGGAT 998
| || ||||| | ||| ||||||| ||||| || |||||| | || ||||| | |||
Sbjct 926 GTGGTATGGTGGAGGTTG-AGCAGTTGAATGTTGCTCATAATTTG-TTATCTGGGAAGAT 983
Query 999 TCCGGCGAGTATTTGTCAG-TTGCCGAGG-TTGGAGAATTTCACTT-TCAGTTACAATTT 1055
||||||||||||||||||| || || | | ||| |||||||||||| | ||||| |||||
Sbjct 984 TCCGGCGAGTATTTGTCAGCTT-CCTAAGCTTG-AGAATTTCACTTAT-AGTTATAATTT 1040
Query 1056 CTTCACCGGAGA-GCCACCCGTGTGTCTC-GGTTTGCCTGGGTTTGATGATCAGCGGAAT 1113
||| || || || || || |||||| | |||| | ||| ||||||||||| | | |||
Sbjct 1041 CTTTACTGGTGAAGCT-CCTGTGTGTTTGAGGTT-GTCTGAGTTTGATGATCGGAGAAAT 1098
Query 1114 TGTTTGCCGGCGA-GACCTGCGCAGAGATCT-C-CGGGACAATGTGCGGCTTTCTCT-TC 1169
|||||||| | || ||||||| ||||||||| | ||| |||||| | ||||||| | ||
Sbjct 1099 TGTTTGCCCG-GAAGACCTGCTCAGAGATCTTCACGG--CAATGTTCAGCTTTCT-TGTC 1154
Query 1170 TCTTCCACCGGTGGATTGTGGTTCATTTGGATGTGGCCGTTCT 1212
| || ||||||||||||| || ||||| ||||| ||||||
Sbjct 1155 ACGGCCTTCGGTGGATTGTGGATCTTTTGGTTGTGGTCGTTCT 1197
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122407340920
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5