BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492998
Length=6092
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18600.1 | Symbols: WAVE5, ATSCAR-LIKE, SCARL | SCAR family ... 4595 0.0
> AT4G18600.1 | Symbols: WAVE5, ATSCAR-LIKE, SCARL | SCAR family
protein | chr4:10239881-10247372 REVERSE LENGTH=6153
Length=6153
Score = 4595 bits (2488), Expect = 0.0
Identities = 3047/3316 (92%), Gaps = 41/3316 (1%)
Strand=Plus/Plus
Query 2804 ATGAAAGG-TTCTTGCCAGAAAAGCCTTTCGAAACATATTCTTCTTTGGCAGAATTGCAG 2862
||| |||| ||||| |||||||| || |||||| ||| |||||||| |||||||||
Sbjct 2851 ATGGAAGGAGTCTTGTCAGAAAAGTCTCCCGAAACGTATCCTTCTTTGTCAGAATTGCCT 2910
Query 2863 GAAGAAAAGATTTTGCATGAAGAAGCTGATGATGGTATGCGCCCATGTCTTTCTGAAGCT 2922
||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct 2911 GAAGAAAAGATTTTGGATGAAGAAGCTGATGATGCCATGCACCCATGTCTTTCTGAAGCT 2970
Query 2923 TTTACTGATGAACAAATCTCACCTAAAGTTCTTGATTCCACAAATTCGCCTGTGGCAGAA 2982
||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 2971 GTTAGTGATGAACAAAGCTCACCTAACGTTCTTGGTTCCACAAATTCGCCTGTGGCAGAA 3030
Query 2983 GCTGTTCCACATGAACAAACCACACTTGAAGATTTTGTTGGCAGAGATCCATGTTTGGTA 3042
||||||||||| | |||| | || ||||||| |||||||||| ||||||||||||||||
Sbjct 3031 GCTGTTCCACAAGCGCAAATCTCAGTTGAAGAATTTGTTGGCATAGATCCATGTTTGGTA 3090
Query 3043 GAAGCTGTTCATGATAAGAGGGTTTTGCCAGAAGAACAGGTCACCTCATGTATCTATTTA 3102
|||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 3091 GAAGCTGTTCCTGATATGAGGGATTTGCCAGAAGAACATATCACCTCATGTATCTATTTA 3150
Query 3103 ACAAATGTGGTGCCTATTGAAGAAGTCTTGCCAGAAGAACCTTTAGATGTGTGTGCATCT 3162
||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||
Sbjct 3151 ACAAATGTGGTGCCTATCGAAGAAGTCTTGCCAGAAGAACCTTTTGAAGCGTGTGCATCT 3210
Query 3163 TTGGGAAAATTGCCTAAAGATAAGATCTCACAAGAAAAATCTGATGAGGCTATTCAT-C- 3220
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
Sbjct 3211 TTGGGAAAATTGCCTAAAGATAAGATCTCACAAGAAGAATCTGATGAGGCTACACATACG 3270
Query 3221 -CGTCTTGTGCCAAAACTGAAAGTCATGAAAATTTCTCACTGCAAGTTCTTGATT-CATC 3278
||||||||||||| |||||||| ||||| || |||||||| |||||||| ||| || |
Sbjct 3271 TTGTCTTGTGCCAAAGCTGAAAGTGATGAACATGTCTCACTGGAAGTTCTTAATTCCA-C 3329
Query 3279 AAATTTGTCTGTGGCAGAAGCTATTCCACATGAACAAACCACACTTGACGAATTTGTTGG 3338
||||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||
Sbjct 3330 AAATTTGTCTGCGGCAGAAGCTATTCCAAATGAGCAAGTCACACTTGACGAATTTGTTGG 3389
Query 3339 CGTAGATCCGTGTTTGGGAGAAGCTGTTCTTGATGAAAG-GGTTTTGCCAGAAGAACTTG 3397
| ||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||
Sbjct 3390 CATAGATCCGTGTTTGGGAGAAGTTGTTCTTGATG-AAGAGGTTTTGCCAGAACAACTTG 3448
Query 3398 ACACCACATGTCTGTCTTTGAAAAAAGCCGCGCCCATCGA-AACAATCTTTCCAGAAGAA 3456
|||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||||
Sbjct 3449 ACACCACATGTCGGTCTTTGACGAAAGCTGCGCCCATC-ATGACAATCTTTCCAGAAGAA 3507
Query 3457 CCTCCCGAAGTGTATCCTTCTTTGGAAGAATTGCCAGAAGAAAAGATCTCGCAAG-A-AA 3514
||||| |||||||||||||||||||||||||||||||||||||||||| | |||| | ||
Sbjct 3508 CCTCCGGAAGTGTATCCTTCTTTGGAAGAATTGCCAGAAGAAAAGATCGCACAAGAAGAA 3567
Query 3515 -AA---GA--A-GCTACTCATCCATATTTTTCTGAAGCTGTTTGTGATGAGAAGATCTCA 3567
|| || | ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3568 GAAGTTGATGATGCTACTCATCCATATTTTTCTGAAGCTGTTTGTGATGAGAAGATCCCG 3627
Query 3568 CCACTGGAAGATCCTGGTTCCACACATCCATCTTTGGAAGAATCCGATACGT-TCGAGG- 3625
|||||||||||||||||||||||||||||||||||||||||||||| | ||| | ||||
Sbjct 3628 CCACTGGAAGATCCTGGTTCCACACATCCATCTTTGGAAGAATCCGTTCCGTAT-GAGGA 3686
Query 3626 AGACCTCGCATGAAGAACTTGTTGGAACAAATCCATTTTTGGAATTAGCTGTTCCCAACG 3685
|| |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||
Sbjct 3687 AG-CCTCGCATGAAGAACTTGTTGGCACAAATCCATTTTTGGAATCAGCTTTTCCCAACG 3745
Query 3686 AAATGGGTTTTCCAGACGAACCTGGCGTCACATATCGGTCTGT-GGCAGAAGCTGTTTCT 3744
|||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 3746 AAATCGGTTTTCCAGACGAACCTGGCGTCACATATCGGTCT-TCGGCAGAAGCTGTTTCT 3804
Query 3745 AAGGGAAAGAACTTGCCGGAAGAACCCTTACCTACTTATCCGTCTTGGGCAGATGTTGTA 3804
|||| |||||||||||| |||||| |||||||||| ||||||||||||||||| ||||||
Sbjct 3805 AAGGAAAAGAACTTGCCAGAAGAATCCTTACCTACATATCCGTCTTGGGCAGAAGTTGTA 3864
Query 3805 CCTGATGAAAAGATCTCTGGAGAAGAACTTCATTCCACAAATCCATCTTCTGCAGAAGCA 3864
|||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct 3865 CCTGATGAAAAGATCTCTCGAGAAGAACTTGATTCCACATATCCATCTTCTGCAGAAGCT 3924
Query 3865 GTTTTTAAAGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAAC-GGTTCC 3923
|||||| | ||||| ||| |||||||||||||| || |||||||||||||||| || ||
Sbjct 3925 GTTTTTGATGAAAATATCTCAGGCTCAGAAGCTCCTGGTTCCACAACAGAAACTGG-TCG 3983
Query 3924 ACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTCCTTGAATGAAGCAGT 3983
||| |||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||
Sbjct 3984 ACAAAACAAAACCTTCCCTGAAAAAACTTTTGCCACGGAAAATTCCTTGAACGAAGCAGT 4043
Query 3984 TTTTGATGAAAAGATCTCAGGCTCAGAAGCTTCTAGTTCCACTACAGAAACTAATCCACA 4043
|||||||||||||||| |||||||||||||||||| |||||| ||||||||| ||||||
Sbjct 4044 TTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACTGGTCCACA 4103
Query 4044 CAACAAAACCTTCACTGAAGAACCTTTTGCCACGGAAAATTCCCTGAAAGAAGCAGATTT 4103
||||||||||||| |||||||||||||||||| |||||||| | |||| ||||||| |||
Sbjct 4104 CAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTTCTTGAACGAAGCAGTTTT 4163
Query 4104 TGATGAAAAGATCCCTGGTTCAGAAGCTCCTGGTTCTGCAACCGAAACTGGTCCACACAA 4163
||||||||||||||| || ||||||||||||| ||| |||| |||||||||| ||||||
Sbjct 4164 TGATGAAAAGATCCCAGGCTCAGAAGCTCCTGTTTCCACAACAGAAACTGGTCTACACAA 4223
Query 4164 -CAAATCATTC-CTTGAAGAACCTGTTGCCAGAGATATTTCCTTGAACGAAGCAGTTGTT 4221
||| | ||| | ||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 4224 TGAAA-CCTTCAC-TGAAGAACCTGTTGCCACAGATATTTCCTTGAACGAAGCAGTTTTT 4281
Query 4222 GATGAAAAGATCCCAGGCTCAGAAGCTTCTTGTTCCACAAGAGAAACTGTTCCACACAAC 4281
| ||||| |||||||||||||||||| || ||||| ||| |||||||| || |||||||
Sbjct 4282 GGTGAAATTATCCCAGGCTCAGAAGCTCCTGGTTCCGCAACAGAAACTGGTCTACACAAC 4341
Query 4282 GAAACCTTCCCTGGAGAACCTGTTGCCACAGATCTTTCCTTGGTCA-AAGCTGTTTTTGA 4340
|||||||||||| | ||||| ||||||| ||||||| ||| | |||| ||||||||
Sbjct 4342 AAAACCTTCCCTGAAAAACCTTTTGCCACGGATCTTT-CTTTAAAAGAAGCAGTTTTTGA 4400
Query 4341 TGAAAGGATCCCAGGCTCAGAAGATTCTAGTTCCTCAATAGAAACCGGTCTACACAACAA 4400
||||| ||||||||||||||||| |||||||||| ||| |||||| ||| |||||||||
Sbjct 4401 TGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAACTAGTCCACACAACAA 4460
Query 4401 AACCTTCCCTGGAGAACCTGTTGCCACGGAGCTGTCCTTGACCGAAGCTGGTTTTGATGA 4460
|||||||||| ||||| || || |||| || ||||||| ||||||||||| |||||||||
Sbjct 4461 AACCTTCCCTAGAGAAACTATTACCACAGATCTGTCCTCGACCGAAGCTGTTTTTGATGA 4520
Query 4461 AAAGATCCCCGGCTCAGAAGCTCCTAGTTCCACAACAGAAACTGGTCCACACAACAAAAC 4520
||||||| | ||||||| || |||||||| |||||||||||||||| |||||||||||
Sbjct 4521 AAAGATCACAGGCTCAGGAGTTCCTAGTTTCACAACAGAAACTGGTTCACACAACAAATG 4580
Query 4521 CTTCCCTGAAGAACCTGTTACCAACGAAAATATTCTGCCAAAAGAACCTGCTGCTGCATA 4580
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 4581 CTTCCCTGAAGAACCTGTTCCCAAGGAAAATATTCTGCCAAAAGAACCTGCTGCTGCATA 4640
Query 4581 TCTGGCTTTGGCTGAAGGTATTCCTGACCAAAAAGTATTCTTGGATGATGCCGCACTTTT 4640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4641 TCTGGCTTTGGCTGAAGGTATTCCTGACCAAAAAGTATTCTTGGATGATGCCGCACTTTT 4700
Query 4641 GTTATTTGCAGAAGCTATTTTCGATCAAAAGTTTTCACCAGAATTTCCAGATTCCACATA 4700
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct 4701 GTTATTTGCAGAAGCTATTTTCGATCAAAAGTTTTCACCAGAAGTTCCGGATTCCACGTA 4760
Query 4701 TCCTTCTTTGAAAGAACCAGAAATGCATGTTGCCGCACCATCTTTAGTAACAGATCTTCC 4760
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 4761 TCCTTCTTTGAAAGAACCAGAAATGCATGTTGCCGCACCATGTGTAGTAACAGATCTTCC 4820
Query 4761 TGCTAAAAACATCAAGGTAAAAGAAGGTGAAGTACATAATGAACCTTACTCAGCATCTGA 4820
|||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||
Sbjct 4821 TGCTAAAAACATCAAGGTAAAAGAAGGTGAAGTACATAATGAGCCCTACACAGCATCTGA 4880
Query 4821 CGTTTCTATGAACCAGAAGAGTGGTTTATTGGAACCGGAGTCTACTGAAAGAACAATTCC 4880
||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||
Sbjct 4881 TGTTTCTATGAATCAGAAGAGTGGTTTATTGGAACCAGAATCTACTGAAAGAACATTTCC 4940
Query 4881 CTCGAGTGGTGGTACTGACACGATTTCTCCAGATACTCAGAAATCTCTTCCAAATGGTAC 4940
|||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 4941 CTCGAGCGGTGGTACTGTTACGATTTCTCCAGATACTCAGAATTCTCTTCCAAATGGTAC 5000
Query 4941 AAGTGTTGAATCAATCAGTATATGGAGCAATGGAGGACTCCTTGGACTTGCGCCATTGAA 5000
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 5001 AAGTGTTGAATCAATAAGTATATGGAGCAATGGAGGACTCCTTGGACTCGCGCCATTGAA 5060
Query 5001 ACCTCCAGTTTTTGCTGAGCCTAATGCTGGAAGCCAACATATACAGAACGAGATCAACGA 5060
||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct 5061 ACCTCCAGTATTTGCTGAGCCTAATTCTGGAAGCCAACATATAAAGCACGAGATCAACGA 5120
Query 5061 AGCTAGTGTTCTTTCGACAAGGACGCAGGAATCATCGAGCCGATCAGTTGAAAATACTGA 5120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 5121 AGCTAGTGTTCTTTCGACAAGGAAGCAGGAATCATCGAGCCGATCAGTTGAAAATGCTGA 5180
Query 5121 GAAGAGCTCACTTCCATTAGTTGTTTCAGATCCCACGTCTCAACAACACAGCAACATGTC 5180
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 5181 GAAGAGCTCACTTCCATTAATTGTTTCAGATCCCACGTCTCAACAACAAAGCAACATGTC 5240
Query 5181 GAGTCTCTCTCCCATGCAGAGCACTGGAACATCATTCAGAGTTTTTGGCTTAAGTCATAG 5240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 5241 GAGTCTCTCTCCCATGCAGAGCACTGGAACATCGTTCAGAGTTTTTGGCTTAAGTCATAG 5300
Query 5241 ATTACTCATGGCTGGGTTTGGGGGAAACTCTTCTTCATCTTGCAAATTTGAATCCGTACC 5300
||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||
Sbjct 5301 ATTACTCATGGCTGGGTTTCGGGGAAACTCTTCTTCAACTTGCAAATTTGAATCTGTACC 5360
Query 5301 AAGTAGTAGCTATG-TAACCGGAGTAGCAGCTATCGAAGACAAGACTCAGCAAACTCCTG 5359
||||||||||||| || || ||||||| ||||||||||||| ||||||||||| |||||
Sbjct 5361 TAGTAGTAGCTATGATA-CCAGAGTAGCTGCTATCGAAGACAGGACTCAGCAAAGTCCTG 5419
Query 5360 GTGGCTCAAGCTATGAGGAGCAATGGGATTATGAATCATCTCTCTTTGGTTCGCCTACTT 5419
|||| ||||||| ||||||||||| |||||||||||||||||||||||| || |||||||
Sbjct 5420 GTGGTTCAAGCTTTGAGGAGCAATTGGATTATGAATCATCTCTCTTTGGCTCACCTACTT 5479
Query 5420 CATCACCACCGGTTGAACATATGAAAATATCATTCAACCCAATAGAAGCCTCTCCAGTTC 5479
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5480 CATCCCCACCGGTTGAACATATGAAAATATCATTCAACCCAATAGAAGCCTCTCCAGTTC 5539
Query 5480 CTAAATTGAAACTGAGAATCCCATGCCAACCTCGGTACAATGGTGAAAATGCGGATATGT 5539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5540 CTAAATTGAAACTGAGAATCCCATGCCAACCTCGGTACAATGGTGAAAATGCGGATATGT 5599
Query 5540 TCCCTTCGTTTCAGCTGGTTCCAGAGGCTAGCAACTCTGAAGACGACGACGACAACAGTG 5599
|||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct 5600 TCCCTTCGTTTCAGTTGGTTCCAGAGGCTAGCAACTCTGATGACGGCGATGACAACAGTG 5659
Query 5600 ACACCTTTTGTCAGTCATCTCCTTGTGCTTCTGACAATTGTTTGTCAGATTCTGAGCTAT 5659
||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||| |
Sbjct 5660 ACACCTTTTGTCAGTCATCTCCTTGTGTTTCCGACTATTGTTTGTCAGATTCTGAGCTGT 5719
Query 5660 GGGAATCTGATGAAAGCCCTAGAAAATCTGTATCAAGCTTAAAGCAAGTTGAAGAGAGAA 5719
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 5720 GGGAATCTGATGAAAGCCCTAGAATATCTGTATCAAGCTTGAAGCAAGTTGAAGAGAGAA 5779
Query 5720 GTAGACATGGCGATATGGGTTCTTTTTCTGGTTCACTTCTTGATCTTCCATGTTACGACG 5779
|||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 5780 GTAGACATGGTGATATGGGTTCTTTTTCTGGTTCGTTTCTTGATCTCCCATGTTACGACG 5839
Query 5780 CTGTAGATCATCAATCCACATCTTCAAGACTAGAGCAAGAACAAGTTCCAGAATACAAAC 5839
| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 5840 CCGTAGATCATCAATCCACATTTTCAAGACTAGAGCAAGAACAAGTTCCGGAATACAAAC 5899
Query 5840 CATCTGTCTCAGAGATCATCCGT-CATTGGCCACCAAACCAACCAAAAAGCAGTCCCAGT 5898
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct 5900 CATCTGTCTCAGAGATCATCCGTGC-TTGGCCACCAAACCAACCAAAAAGCAGTCCCTGT 5958
Query 5899 AATGAAGCAAACTTAGACGCAAACACGGT-TCTGAAGAAAACGCAAGATCAATCTCTCGG 5957
|||||||||||| |||||||||||||||| || |||||||||||||||||||||||| ||
Sbjct 5959 AATGAAGCAAACGTAGACGCAAACACGGTGTC-GAAGAAAACGCAAGATCAATCTCTTGG 6017
Query 5958 ATTTGTAGCTACAGATGACGACGGTGGTGATAGTGTTTGTCTTGATGAACATAAAACCAG 6017
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 6018 GCTTGTAGCTACAGATGACGAGGGTGGTGATAGTGTTTGTCTTGATGAACATAAAACCA- 6076
Query 6018 AAGG-ATCTAATTGATTCTTTGTTGTACATTCCTCTCTGTCATTTCAATTTTCAGGTAAA 6076
|||| |||||||||||||||||||||||||||||||||||||||||| |||||| || ||
Sbjct 6077 AAGGGATCTAATTGATTCTTTGTTGTACATTCCTCTCTGTCATTTCAGTTTTCATGTTAA 6136
Query 6077 AACAAACACTATTTAT 6092
|||| ||||||||||
Sbjct 6137 CACAAGCACTATTTAT 6152
Score = 4224 bits (2287), Expect = 0.0
Identities = 2655/2833 (94%), Gaps = 23/2833 (1%)
Strand=Plus/Plus
Query 1 ATGCCGTTGGTGAGGTTCAAGATACGGAACGAGCTAAGCTTAGGTGGGCCGGAGATTCAA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCGTTGGTGAGGTTCAAGATACGGAACGAGCTAAGCTTAGGTGGGCCGGAGATTCAA 60
Query 61 CGTAGCGCCGCCGTGGAAGATGAAGAACCTAAGGCGATTCTCGGCGCTGTTGAAGTGGCT 120
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 61 CGTAGCGCCTCCGTGGAAGATGAGGAACCTAAGGCGATTCTCGGCGCTGTTGAAGTAGCT 120
Query 121 GGACTCATCGGTATCCTTCGTCAGTTAGGCGATCTCGCTGAATTTTCCGCAGAAGTATTT 180
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 121 GGACTCATCGGTATTCTTCGTCAGTTAGGCGATCTCGCTGAATTTTCTGCAGAAGTATTT 180
Query 181 AACGGCTTACAAGAAGAAGTAACTGTAACGGCATCTAGGTGTCAGAAGTTGACAAGCCGT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AACGGCTTACAAGAAGAAGTAACTGTAACGGCATCTAGGTGTCAGAAGTTGACAAGCCGT 240
Query 241 GTTAGACGGATAGAGTCAGCGCTTTCACCTCTTGAAAAGGCTGTTCTCTCACAGACAAGC 300
||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct 241 GTTAGACGGATAGAGTCAGCGCTCTCACCTCTTGAAAAGGCTGTTCTATCGCAGACAAGC 300
Query 301 CACATACATTTTGCATACACAGCAGGCTCTGAGTGGCATCCTCGTATAAGGAATGGACAT 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 301 CACATACATTTTGCATACACTGCAGGCTCTGAGTGGCATCCTCGTATAAGGAATGGACAT 360
Query 361 AGTCATTTTGTTCAGAGTGATTTACCACTGTGTGTTATGGAAAGTTATGAACAATGCAGA 420
||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 361 AGTCATTTTGTTCAGAGTGATTTGCCTCTGTGTGTTATGGAAAGTTATGAGCAATGCAGA 420
Query 421 GATCCTCCTCCGTTGCATCTGCTTGAACGATTTGCCGAAGGTGGTCCTGGATCGTGTCTG 480
||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||||
Sbjct 421 GATCCTCCTCCTTTGCATCTGCTTGACCGATTTGCTGTAGGTGGTCCTGGATCGTGTCTG 480
Query 481 AGAAAATACTCAGACCCAACATTCTTTAGAAAGGAATTAAGCAACCCCAGTAAAACAGAT 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 481 AGAAAATACTCAGACCCAACATTCTTTAGAAAGGAGTTAAGCAACCCCAGTAAAACAGAT 540
Query 541 GATATCAAAGTCCAGAGAGATCAGGCTCACCGCAAAAGAAAGAAAAAGAGGTTACCACAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GATATCAAAGTCCAGAGAGATCAGGCTCACCGCAAAAGAAAGAAAAAGAGGTTACCACAA 600
Query 601 AGAAACATTTGCAGATCAAATGCAGTGTCTACATCTGACGAAACTAGTGGGGCTCATCTC 660
|||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||
Sbjct 601 AGAAACATTTGCAGATCAAATGCAGTGTCTACATCTGATGAAACTAATGGCGCTCATCTC 660
Query 661 AGTAATCTTACTGATGACAGACAAACAACTTCTCAGAGTACGTCCACAGTTGACATGCCA 720
||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 661 AGTTCTTTTACTGATGACAGACCAACAACTTCTCGGAGTACGTCCACAGTTGACATGCCA 720
Query 721 CGTAGCTCTAATATGCAAGATTTATCTGATACTGTAGACCAATCTCATCTGCAAGGGCAG 780
|||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||
Sbjct 721 CGTAGCTCTAATATGCAAGATTTATCGGATATTGTAGACCAATCTTATCTGCAAGGGCAG 780
Query 781 TCAGATGCGCAAGAACGAAGTGAAGCACAAGTACAATCAGATTTCCAAGAGTCATCAAAA 840
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 TCAGGTGCGCAAGAACAAAGTGAAGCACAAGTACAATCAGATTTCCAAGAGTCATCAAAA 840
Query 841 GCTCGCGATTCTATAACTGGTTCAGGTTATATCGAGTATGTCATCAATCAAAGTCCTGTT 900
||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 841 GCTCGTGATTCTATAACTGGTTCAGGTTATATAGAGTATGTCATTAATCAAAGTCCTGTT 900
Query 901 AATGAA-CCTGACGTGAAGCTAGTAGAAGGATTTCTGTCTGGGTCCTTACAACCTGCTGA 959
|| || ||||| |||||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct 901 GAT-AAGCCTGAAGTGAAGCTAGTAGAGGGATTCCTGTCTGGGTCCTTATGTCCTGCTGA 959
Query 960 TAGAATAGGTTCAGCTGTTCCTGCAGGCTGCATTGAAGTTGTAGATGATAATATCCTATA 1019
||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 960 TAGAATAGGTTCAACTGTTCCCGAAGGCTGCATTGAAGTGGTAGATGATAATATCCTATA 1019
Query 1020 TAGCCCCTCAGAAGACCTACATGTGCCTTGTGCTTCTATTGTTTGTGATGAGAAGAAAGA 1079
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 1020 TAGCCCCTCAGAAGACCTACTTGTGCCTTCTGCTTCTAATGTTTGTGATGAGAAGAAAGA 1079
Query 1080 AACACTTGAATCAATGGTGGAGAAAAGCAGCGAAGATGATGAACCATCAGAGATACATGA 1139
|||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct 1080 AACACTTGAATCGATGGTGGAGAAAAGCCGCAAAGATGATGAACCATCAGAGCTACATGA 1139
Query 1140 GTCAAAATTTGGCCCAGTAACACCAGACAGGGTAAGGCAAAATCAAAGGGACTTTGATAG 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 GTCAAAATTTGGCCCAGTAACACCAGACAGGGTAAGGCAAAATCAAAGGGACTTTGATAG 1199
Query 1200 GACGTATATTTTGTTTGATGAGGTAGATAGTGTGGGAGAAAAACAAAGTAAGAGTCAGGC 1259
||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 1200 GACATATATTTTGTTTGATGAGGTAGATATTGTGGGAGAAAAACAAAGTAAGAGCCAGGC 1259
Query 1260 CAACTATATTGATGGAACACTAGGCATTGAGAACGAAGGAGAAAATAAGAGTGAACAAGA 1319
|||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 1260 CAACAATATTGATGGAACACTAGGAATTGAGAACGAAGGAGAAGATAAGAGTGAACAAGA 1319
Query 1320 GAGTGAAGCAGATGAATTTGTGGATGCACGTAATACAATTGAATCAGAATCGGAGAGTGA 1379
||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1320 GAGTGAAGCAGATGAGTTTGTTGATGCTCGTAATACAATTGAATCAGAATCGGAGAGTGA 1379
Query 1380 TATTGATGGAGTACCAAAACCGAAACTGGAGCATTACTTTGGGGATATTAGTACTTATTG 1439
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1380 TATTGATGGAGTACCAAAACCGAAATTGGAGCATTACTTTGGGGATATTAGTACTTATTG 1439
Query 1440 TTCGGAAGATGCTAACAGTGACAACGATGATGGATCAGAAGATATA-CAATATGAAGACA 1498
||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |
Sbjct 1440 TTCGGAAGATGCTAACAGTGACAACAATGATGGATCAGAAGATATAACA-TATGAAGAAA 1498
Query 1499 TGGCAAATTATCCACGCCATGAAAATTCTGAAGATGAATCTTGTTCAGGTTCTTAttttt 1558
||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1499 TGGCACATGATCCACGCCATGAAAATTCTGAAGATGAATCTTGTTCAGGTTCTTACCTTC 1558
Query 1559 ttGAAGATTCAAATGTGTC-ATGTTGCATGTCAGATCCAGTGTGTAAGAAAACTCTGTCT 1617
|||||| |||||||| || | ||||| | ||||||||||||||| || ||||||||| |
Sbjct 1559 CTGAAGACTCAAATGTTTCCA-GTTGCCTATCAGATCCAGTGTGTGAGGAAACTCTGTTT 1617
Query 1618 CATGATGAGAATTCTCAAAAGCCATGGGAATTTTTTGCTA-GCTGCCCTTCGTTATTGGC 1676
|||||||||||||||||||||||||||||||||||| | | | |||||||||||||||||
Sbjct 1618 CATGATGAGAATTCTCAAAAGCCATGGGAATTTTTTACCATG-TGCCCTTCGTTATTGGC 1676
Query 1677 TGAAAAAGCCTTTCCGGATGTAACAATTTTGCGAGAAGAACCTGTCGCTG-CACATCACT 1735
|||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct 1677 TGAAAAAGCCGTTCCGGATGTAACAATTTTGCGAGAAGAACCTGTCA-TGGCACATCCCT 1735
Query 1736 TGTTGGCAGGAGACTGGGCTAATGAAAAGATATCATCTGAAGAACCTAGTT-TCCCATAC 1794
|||| |||||||||| |||||||||||||||||||||||||||| || || || ||| |
Sbjct 1736 TGTTTGCAGGAGACTCTGCTAATGAAAAGATATCATCTGAAGAACGTA-TTATCTCATGC 1794
Query 1795 CCGTCTCTGAAAGATGCTATTCCTGCTGAAAAGATCTTGCCAGAAGAACATTCGGTCAAC 1854
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1795 CCGTCTCTGAAAGATGCTATTCCTGCTGAAAAGATCTTGCCAGAAGAACATTTGGTCAAC 1854
Query 1855 TATCCATCTCTCGCAGAAGCTATTCCCCGTGAAAAGATCTCGCCAGGAGAGTCTATTGCC 1914
||||||||||| | | | |||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1855 TATCCATCTCTTG-A-A-GCTATTCCCCATGAAAAGATCTTGCCAGGAGAGTCTATTGCC 1911
Query 1915 GAATATCCATCTTTTGCAGAAATCGT-CCTCCAAGAAAAAATCTTGTCGGAAAAGTCTTT 1973
||||||| ||||||||||||||| | || | ||||||| |||||||| |||||||||||
Sbjct 1912 AAATATCCTTCTTTTGCAGAAATCATACCGC-AAGAAAAGATCTTGTCTGAAAAGTCTTT 1970
Query 1974 GGAAGAAGCTGTGCCTGACAATATGACCCCAGCAGGAGAACCTGATGCTACTCATCCATC 2033
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1971 GGAAGAAGCTGTGCTTGACAATATGACCCCAGCAGGAGAACCTGATGCTGCTCATCCATC 2030
Query 2034 ATTTCCCGAAGCTGTTCAAGACAAGAAACTTTCACCAGAAGTTCTTGATTCGAAAttttt 2093
||||||| |||||||||||||||||||| | |||||||||||||||||||||||| | ||
Sbjct 2031 ATTTCCCAAAGCTGTTCAAGACAAGAAAATCTCACCAGAAGTTCTTGATTCGAAAATATT 2090
Query 2094 ttCTGTGCCAGAAGCTGTTTCACAAGAGCCAATCTCACTTGAAGAGTTTGATGGGATATA 2153
|||||||||| ||||||||||||||||||||||||| |||||||| |||| | ||||| |
Sbjct 2091 TTCTGTGCCAAAAGCTGTTTCACAAGAGCCAATCTCCCTTGAAGAATTTGTTAGGATACA 2150
Query 2154 TCCATGTTTGGCTGAAGCTGTTCATGATGAAAGGTTCTTGACAGAAGAGCCTTCCACCAC 2213
||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||| |||
Sbjct 2151 TCCATGTTTGGCTGAAGCTGTTCCTGATGAAAGGTTCTTGATAGAAGAACCTCCCAGCAC 2210
Query 2214 ATGTTTGTCTTTGACAAAAGCCATCCCTA-TCGAAAAAGTATTGCCAGAAAAACCTTTGG 2272
|||||||||||||||||||||||| |||| | |||| | |||||||||||||| ||||||
Sbjct 2211 ATGTTTGTCTTTGACAAAAGCCATGCCTACT-GAAATATTATTGCCAGAAAAAACTTTGG 2269
Query 2273 AATCGTCTCAATATTTGGCAGAATTGCCTAAAGAAGATATATTGCAAGAAAAAACTGTTG 2332
|||||||||| ||||||| |||||||||| |||||||||| |||||||||||| ||||||
Sbjct 2270 AATCGTCTCATTATTTGGAAGAATTGCCTGAAGAAGATATCTTGCAAGAAAAATCTGTTG 2329
Query 2333 ATTCTACACGTCCATCTTGTGCCAAAGCTGTTGCAGAAACAAATTTATCACAAGAAGTTC 2392
||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||||
Sbjct 2330 ATTCTACACATCCATCTTGTGCCAAAGCTGCTGCAGAAACAAATCTATCACCAGAAGTTC 2389
Query 2393 TTGATGCCTTAAACTTGTCTGTGACAGAAGCTGTTCCGCAAGAGAAAA-TCTCACTTGAA 2451
||||| || ||| ||||||||| ||||||||||||||||||| | || |||||||||||
Sbjct 2390 TTGATTCCACAAAATTGTCTGTGGCAGAAGCTGTTCCGCAAGA-ACAAGTCTCACTTGAA 2448
Query 2452 GAATTTGTTGGCATCAATCCGTGTTTGGTAGAAACGGTTCCTGATGAAAGGCTCTTGCCA 2511
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2449 GAATTTGTTGGCATCAATCCGTGTTTGGTAGAAGCGGTTCCTGATGAAAGGCTCTTGCCA 2508
Query 2512 GAAGAACCTGTCACCACATATCTGTCTTTAACAAAAGCTGTGGCCATTGAAAAGGTCTTG 2571
|||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||
Sbjct 2509 GAAGAACCTGACACCACATATCTGTCTTTGACAAAAGCCGTGGCTATTGAAAAGGTCTTG 2568
Query 2572 TCAGAAGAGATTTTGGAAACATATCATTCTTTGGCAGAATTGCTTGAAGAAGAGATTTCA 2631
||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct 2569 TCAGAAGAGCTTTTGGAAACATATCCTTCTTTGGCAGAATTGCCTGAAGAAGAGTTTTTG 2628
Query 2632 CAGGAAGAAACTGATGATGCCACACATACATCTGAAGCTGTTAGTGATGAAGGAATCTCC 2691
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2629 CAGGAAGAAACTGATGATGCCACACATACATCTGAAGCTGTTAGTGATGAAGAAATCTCC 2688
Query 2692 CCAGAAGTTTCTGATTCCACAAATTTGTCTCTTGAA-AACGCTCTTCCACAAGAGCAAAT 2750
| |||||||||||||||||||||||||||||||||| || |||||||||| |||||| ||
Sbjct 2689 CAAGAAGTTTCTGATTCCACAAATTTGTCTCTTGAAGAA-GCTCTTCCACTAGAGCACAT 2747
Query 2751 CTCACTTGAAGAATTTGTTGGCATAAATCAGTGTTTGGCAGAAGCGGTTCCTGATGAAAG 2810
||||| ||||||||||||||||||| |||||||||||| ||||| || |||||| |||||
Sbjct 2748 CTCACATGAAGAATTTGTTGGCATAGATCAGTGTTTGGTAGAAGTGGCTCCTGAGGAAAG 2807
Query 2811 GTTCTTGCCAGAA 2823
|||||||||||||
Sbjct 2808 GTTCTTGCCAGAA 2820
Score = 647 bits (350), Expect = 0.0
Identities = 504/578 (87%), Gaps = 12/578 (2%)
Strand=Plus/Plus
Query 3859 GAAGCAGTTTTTAAAGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAAC- 3917
|||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 4036 GAAGCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACT 4095
Query 3918 GGTTCCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTCCTTGAATGA 3977
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 4096 GG-TCCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTTCTTGAACGA 4154
Query 3978 AGCAGTTTTTGATGAAAAGATCTCAGGCTCAGAAGCTTCTAGTT-CCACTACAGAAACTA 4036
|||||||||||||||||||||| |||||||||||||| || ||| |||| |||||||||
Sbjct 4155 AGCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTCCT-GTTTCCACAACAGAAACTG 4213
Query 4037 ATCCACACAACAAAACCTTCACTGAAGAACCTTTTGCCACGGAAAATTCCCTGAAAGAAG 4096
|| |||||| |||||||||||||||||||| ||||||| || | |||| |||| ||||
Sbjct 4214 GTCTACACAATGAAACCTTCACTGAAGAACCTGTTGCCACAGATATTTCCTTGAACGAAG 4273
Query 4097 CAGATTTTGATGAAAAGATCCCTGGTTCAGAAGCTCCTGGTTCTGCAACCGAAACTGGTC 4156
||| ||||| ||||| ||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct 4274 CAGTTTTTGGTGAAATTATCCCAGGCTCAGAAGCTCCTGGTTCCGCAACAGAAACTGGTC 4333
Query 4157 CACACAACAAATCATTCCTTGAAGAACCTGTTGCCA-GAGATATTTCCTTGAACGAAGCA 4215
|||||||||| | |||| |||| ||||| |||||| | ||| |||| || || ||||||
Sbjct 4334 TACACAACAAAACCTTCCCTGAAAAACCTTTTGCCACG-GATCTTTCTTTAAAAGAAGCA 4392
Query 4216 GTTGTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTTGTTCCACAAGAGAAACT-GTTCC 4274
||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| || ||
Sbjct 4393 GTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAACTAGT-CC 4451
Query 4275 ACACAACGAAACCTTCCCTGGAGAACCTGTTGCCACAGATCTTTCCTTGGTCAAAGCTGT 4334
||||||| ||||||||||| ||||| || || |||||||||| |||| | | |||||||
Sbjct 4452 ACACAACAAAACCTTCCCTAGAGAAACTATTACCACAGATCTGTCCTCGACCGAAGCTGT 4511
Query 4335 TTTTGATGAAAGGATCCCAGGCTCAGAAGATTC-TAGTTCCTCAATAGAAACCGGT-CTA 4392
||||||||||| |||| ||||||||| || ||| ||||| | ||| |||||| ||| | |
Sbjct 4512 TTTTGATGAAAAGATCACAGGCTCAGGAG-TTCCTAGTTTCACAACAGAAACTGGTTC-A 4569
Query 4393 CACAACAAAACCTTCCCTGGAGAACCTGTTGCCACGGA 4430
||||||||| |||||||| |||||||||| ||| |||
Sbjct 4570 CACAACAAATGCTTCCCTGAAGAACCTGTTCCCAAGGA 4607
Score = 640 bits (346), Expect = 0.0
Identities = 498/572 (87%), Gaps = 8/572 (1%)
Strand=Plus/Plus
Query 3976 GAAGCAGTTTTTGATGAAAAGATCTCAGGCTCAGAAGCTTCTAGTTCCACTACAGAAACT 4035
||||| |||||||||||||| |||||||||||||||||| || ||||||| |||||||||
Sbjct 3919 GAAGCTGTTTTTGATGAAAATATCTCAGGCTCAGAAGCTCCTGGTTCCACAACAGAAACT 3978
Query 4036 AATCCACACAACAAAACCTTCACTGAAGAACCTTTTGCCACGGAAAATTCCCTGAAAGAA 4095
|| ||| |||||||||||| ||||| || |||||||||||||||||||| |||| |||
Sbjct 3979 GGTCGACAAAACAAAACCTTCCCTGAAAAAACTTTTGCCACGGAAAATTCCTTGAACGAA 4038
Query 4096 GCAGATTTTGATGAAAAGATCCCTGGTTCAGAAGCTCCTGGTTCTGCAACCGAAACTGGT 4155
|||| |||||||||||||||||| || ||||||||| || ||| |||| |||||||||
Sbjct 4039 GCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACTGGT 4098
Query 4156 CCACACAACAAATCATTCCTTGAAGAACCTGTTGCCA--GAGATATTTCCTTGAACGAAG 4213
|||||||||||| | |||| |||||||||| |||||| || | |||| |||||||||||
Sbjct 4099 CCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGA-AAATTT-CTTGAACGAAG 4156
Query 4214 CAGTTGTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTTGTT-CCACAAGAGAAACTGTT 4272
||||| ||||||||||||||||||||||||||||| || ||| |||||| |||||||| |
Sbjct 4157 CAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTCCT-GTTTCCACAACAGAAACTGGT 4215
Query 4273 CCACACAACGAAACCTTCCCTGGAGAACCTGTTGCCACAGATCTTTCCTTGGTCAAAGCT 4332
| |||||| ||||||||| ||| ||||||||||||||||||| |||||||| | ||||
Sbjct 4216 CTACACAATGAAACCTTCACTGAAGAACCTGTTGCCACAGATATTTCCTTGAACGAAGCA 4275
Query 4333 GTTTTTGATGAAAGGATCCCAGGCTCAGAAGATTCTAGTTCCTCAATAGAAACCGGTCTA 4392
||||||| ||||| |||||||||||||||| | || ||||| ||| |||||| ||||||
Sbjct 4276 GTTTTTGGTGAAATTATCCCAGGCTCAGAAGCTCCTGGTTCCGCAACAGAAACTGGTCTA 4335
Query 4393 CACAACAAAACCTTCCCTGGAGAACCTGTTGCCACGGAGCTGTCCTTGACCGAAGCTGGT 4452
||||||||||||||||||| | ||||| |||||||||| || || || | ||||| | |
Sbjct 4336 CACAACAAAACCTTCCCTGAAAAACCTTTTGCCACGGATCTTTCTTTAAAAGAAGCAGTT 4395
Query 4453 TTTGATGAAAAGATCCCCGGCTCAGAAGCTCCTAGTTCCACAACAGAAACTGGTCCACAC 4512
||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||
Sbjct 4396 TTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAACTAGTCCACAC 4455
Query 4513 AACAAAACCTTCCCT-GAAGAACCTGTTACCA 4543
||||||||||||||| || ||| || ||||||
Sbjct 4456 AACAAAACCTTCCCTAGA-GAAACTATTACCA 4486
Score = 459 bits (248), Expect = 2e-127
Identities = 387/455 (85%), Gaps = 6/455 (1%)
Strand=Plus/Plus
Query 4092 AGAAGCAGATTTTGATGAAAAGATCCCTGGTTCAGAAGCTCCTGGTTCTGCAACCGAAAC 4151
|||||| | |||||||||||| ||| | || ||||||||||||||||| |||| |||||
Sbjct 3918 AGAAGCTGTTTTTGATGAAAATATCTCAGGCTCAGAAGCTCCTGGTTCCACAACAGAAAC 3977
Query 4152 TGGTCCACACAACAAATCATTCCTTGAAGAACCTGTTGCCA-GAGATATTTCCTTGAACG 4210
||||| ||| |||||| | |||| |||| || || |||||| | || | |||||||||||
Sbjct 3978 TGGTCGACAAAACAAAACCTTCCCTGAAAAAACTTTTGCCACG-GAAAATTCCTTGAACG 4036
Query 4211 AAGCAGTTGTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTTGTTCCACAAGAGAAACTG 4270
|||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 4037 AAGCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACTG 4096
Query 4271 TTCCACACAACGAAACCTTCCCTGGAGAACCTGTTGCCACAGATC-TTTCCTTGGTCAAA 4329
|||||||||| |||||||||||| ||||||| |||||| || |||| ||| | ||
Sbjct 4097 GTCCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTTC-TTGAACGAA 4155
Query 4330 GCTGTTTTTGATGAAAGGATCCCAGGCTCAGAAGATTCTAGTT-CCTCAATAGAAACCGG 4388
|| ||||||||||||| ||||||||||||||||| | || ||| || ||| |||||| ||
Sbjct 4156 GCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTCCT-GTTTCCACAACAGAAACTGG 4214
Query 4389 TCTACACAACAAAACCTTCCCTGGAGAACCTGTTGCCACGGAGCTGTCCTTGACCGAAGC 4448
||||||||| |||||||| ||| ||||||||||||||| || | ||||||| ||||||
Sbjct 4215 TCTACACAATGAAACCTTCACTGAAGAACCTGTTGCCACAGATATTTCCTTGAACGAAGC 4274
Query 4449 TGGTTTTGATGAAAAGATCCCCGGCTCAGAAGCTCCTAGTTCCACAACAGAAACTGGTCC 4508
| ||||| ||||| ||||| ||||||||||||||| ||||| |||||||||||||||
Sbjct 4275 AGTTTTTGGTGAAATTATCCCAGGCTCAGAAGCTCCTGGTTCCGCAACAGAAACTGGTCT 4334
Query 4509 ACACAACAAAACCTTCCCTGAAGAACCTGTTACCA 4543
|||||||||||||||||||||| ||||| || |||
Sbjct 4335 ACACAACAAAACCTTCCCTGAAAAACCTTTTGCCA 4369
Score = 255 bits (138), Expect = 3e-66
Identities = 200/230 (87%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 4328 AAGCTGTTTTTGATGAAAGGATCCCAGGCTCAGAAGATTCTAGTTCCTCAATAGAAACCG 4387
|||||||||||||||||| ||| |||||||||||| | || ||||| ||| |||||| |
Sbjct 3920 AAGCTGTTTTTGATGAAAATATCTCAGGCTCAGAAGCTCCTGGTTCCACAACAGAAACTG 3979
Query 4388 GTCTACACAACAAAACCTTCCCTGGAGAACCTGTTGCCACGG-AGCTGTCCTTGACCGAA 4446
||| ||| |||||||||||||||| | || || ||||||||| | | ||||||| ||||
Sbjct 3980 GTCGACAAAACAAAACCTTCCCTGAAAAAACTTTTGCCACGGAAAAT-TCCTTGAACGAA 4038
Query 4447 GCTGGTTTTGATGAAAAGATCCCCGGCTCAGAAGCTCCTAGTTCCACAACAGAAACTGGT 4506
|| | |||||||||||||||||| |||||||||||| ||| |||||||||||||||||||
Sbjct 4039 GCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACTGGT 4098
Query 4507 CCACACAACAAAACCTTCCCTGAAGAACCTGTTACCAACGAAAATATTCT 4556
|||||||||||||||||||||||||||||| || ||| |||||| ||||
Sbjct 4099 CCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAAT-TTCT 4147
Score = 224 bits (121), Expect = 8e-57
Identities = 195/230 (85%), Gaps = 8/230 (3%)
Strand=Plus/Plus
Query 3858 AGAAGCAGTTTTTAAAGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAAC 3917
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4386 AGAAGCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAAC 4445
Query 3918 G-GTTCCACACAACAAAACCTTCCCT-GAAGAACCTTTTGCCATGGAAAAT-TCCTTGAA 3974
|| ||||||||||||||||||||| || ||| || || ||| || | |||| ||
Sbjct 4446 TAGT-CCACACAACAAAACCTTCCCTAGA-GAAACTATTACCACAGATC-TGTCCTCGAC 4502
Query 3975 TGAAGCAGTTTTTGATGAAAAGATCTCAGGCTCAGAAGCTTC-TAGTTCCACTACAGAAA 4033
||||| |||||||||||||||||| ||||||||| || ||| ||||| ||| |||||||
Sbjct 4503 CGAAGCTGTTTTTGATGAAAAGATCACAGGCTCAGGAG-TTCCTAGTTTCACAACAGAAA 4561
Query 4034 CTAATCCACACAACAAAACCTTCACTGAAGAACCTTTTGCCACGGAAAAT 4083
|| | ||||||||||| |||| ||||||||||| || ||| |||||||
Sbjct 4562 CTGGTTCACACAACAAATGCTTCCCTGAAGAACCTGTTCCCAAGGAAAAT 4611
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 304008579824
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5