BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493014 Length=1506 Score E Sequences producing significant alignments: (Bits) Value AT4G18470.1 | Symbols: SNI1 | negative regulator of systemic ac... 2233 0.0 > AT4G18470.1 | Symbols: SNI1 | negative regulator of systemic acquired resistance (SNI1) | chr4:10192909-10195662 FORWARD LENGTH=1525 Length=1525 Score = 2233 bits (1209), Expect = 0.0 Identities = 1388/1474 (94%), Gaps = 13/1474 (1%) Strand=Plus/Plus Query 40 GAAATTGTGAAAGAGAAGATGTCGAAAGAGACGAA-GG--CTAACAACACTAGCAGAGTG 96 ||||||||||||||||||||||||||||||||||| || |||||| || ||||||||| Sbjct 58 GAAATTGTGAAAGAGAAGATGTCGAAAGAGACGAAGGGTAATAACAATACAAGCAGAGTG 117 Query 97 ATGAGTAGCTATGGCGGTGGCTTGGAAGCTAACACCTTGGCTATGCTTGATTCCACCGGA 156 |||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 118 ATGAGTGGCTATGGCGGTAGCTTGGAAGCTAACACCTTGGCTATGATTGATTCCACCGGA 177 Query 157 GCTAAAGACAATCGCGACGCTAACGAAGATCGTTTGCAGTATCTGGAAGCTGTTCGTGCT 216 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 178 GCTAAAGACAGTCGCGACGCTAACGAAGATCGTTTGCAGTATCTGGAAGCTGTTCGTGCT 237 Query 217 GCTTCACTTGTACCTGAGAATGGAGTTCCTCCAACCAACAAAATGTACCAAGCGATTTTC 276 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| Sbjct 238 GCTTCACTTGTACCCGAAAATGGAATTCCTCCAACCAACAAAATGTACCAAGCGATTTTC 297 Query 277 CGGATATTGAGATTTGGTAAAACACTGGAACTTATAACAGCAAGTTTCCAGCTTTTGACA 336 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 298 AGGATATTGAGATTTGGTAAAACATTGGAACTTATCACAGCAAGTTTCCAGCTTTTGACT 357 Query 337 CAATTACATCAGCGGTTTCCTTGGGTTTATGTATCTGATTCATCTGATCAGTTGGAAATT 396 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct 358 CAATTACATCAGCGGTTTCCTTGGGTTTATGTATCTGATTCAGCTGATCAGTTGGACATC 417 Query 397 GTTGACGAGGCTTGGTCACCGTTTAATTTCGGGTCTGATGTTGATTCTGATGAGAAGGAT 456 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 418 GTTGACGAGGCTTGGTCACCGTTTAATTTCGGGTCTGATGTTGATTCTGATGAAAAGGAT 477 Query 457 ATATCAGTGAGAAGCTTATTTTTTCAACAGCTGATTCAAAACATGAACAAAAGGGTTAGT 516 |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| | Sbjct 478 TTATCAGTGAGAAGCTTATTTTTGCAACAGCTGATTCAGAACATGAACAAAAGAGTTAAT 537 Query 517 GAGCCTGAGGAATCAAATTTAAAGACT-CTGGGGAATATGTTTCTGTTCAAGTATCTTGC 575 ||| ||||||||||| ||||||||| | || || |||||||||||||||||||||||||| Sbjct 538 GAGTCTGAGGAATCAGATTTAAAGA-TCCTTGGAAATATGTTTCTGTTCAAGTATCTTGC 596 Query 576 TCATGCTCTTAAGCTAGATTTCACGCCCCGGAATCAAGTGTATGAAGAAACCAAGAACTG 635 ||||| |||||||||||||||||| ||||| |||||||||||||||||||| | |||||| Sbjct 597 TCATGTTCTTAAGCTAGATTTCACACCCCGAAATCAAGTGTATGAAGAAACTATGAACTG 656 Query 636 GAGTCTTTTGAAGGAATCTTCTCTGAATCTACTTCTGGCTTCACGAAAAGTGAATTTCAA 695 |||||| || |||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 657 GAGTCTCTTAAAGGAATCTTTTCTGAATCTACTTCTGGCTTCAAGAAAAGTGAATTTCAA 716 Query 696 ACTTCTAATGAAAGATTATCTATCAACAATGTGTGCACCCATTGATGCTGATGAAAAGTC 755 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 717 ACTTCTAATGAAAGATTATCTATCAACAATGTGTGCATCCATTGATGCTGATGAAAAGTC 776 Query 756 TATCAGTTTGGTAGAATTGCACAAGGACACGCTTTCTGCTATGAAGGAACTACTAGTAAT 815 ||||||||||||||||||||||||||||| |||| |||||||||| ||||| |||||||| Sbjct 777 TATCAGTTTGGTAGAATTGCACAAGGACATGCTTACTGCTATGAAAGAACTTCTAGTAAT 836 Query 816 GATCATTGAGCTTGATTCTTCAAAGAAGAAAGCTGACTTAGAAGGGATTACCTCTAGAGG 875 |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 837 GATCATGGAGCTTGATACATCAAAGAAGAAAGCTGACTTAGAAGGGATTACCTCTAGAGG 896 Query 876 AGATGGCGTAAGGACTCCTGCAATGGAGATCATTCTCGATGAGCTGACTTATGATGGATA 935 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 897 AGATGGCGTAAGGACCCCTGCAATGGAGATCATTCTCGACGAGCTGACTTATGATGGATA 956 Query 936 CTTGCTATCAAATTTTCTTCAGGTTTTCGATGATCCTAAATGGAAGTTAGAGATTGTTCT 995 |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 957 CTTGCTGTCAAAATTTCTTCAGGTTTTCGATGATCCTAAATGGAAGCTAGAGATTGTTCT 1016 Query 996 CCAATACCTTACCAAATACATCCCTAAGCCT-TCTGTTCGTACCCGAAGAACAACTGTTC 1054 |||||||||||| |||||||| ||||||||| | ||| |||||||||||||||||||||| Sbjct 1017 CCAATACCTTACTAAATACATTCCTAAGCCTGT-TGTACGTACCCGAAGAACAACTGTTC 1075 Query 1055 CTCAATCAGAGGATTCGAAAACACTAAATGGGATCTTGAAGACATTTTCAAATGGCTTAA 1114 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct 1076 CTCAAGCAGAGGATTCGAAAACACTAAATGGGATCTTGAAGACGTTTTCAAATGGCACAA 1135 Query 1115 ATGCAAAGAACATCACTAAAAAGATAGGACCTGACATTGTTCAGATCCTCATCGGACATG 1174 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1136 ATCCAAAGAACATCACTAAAAAGATAGGACCTGACATTGTTCAGATCCTCATCGGCCATG 1195 Query 1175 CCTTTCTGGCTCGGCTTACATTCTCTGACCCTAACGAAGAAGACTCTATTACAGAGATAT 1234 |||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| Sbjct 1196 CCTTTCTGGCTCGGCTTACATTCTCTGACCCTCACGAAGGAGACTCTATTTCAGAGATAT 1255 Query 1235 GCAATAGAATCATCTCTGCATTTACAAGTCTAAAGCGAGTAGATCAGAAAATCGAGATTC 1294 ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1256 GCAGTAGTATCATCTCTGCATTTACTAGTCTAAAGCGAGTAGATCAGAAAATCGAGATTC 1315 Query 1295 TACCGTTTGGGAAAGAAGTGTTGTTTACTGCAGGAATGGTACTCAAGGCAAAAGCATAAG 1354 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1316 TACCGTTTGGGAAAGAAGTGTTGTTTACTGCAGGAATGGTACTCAAGGCAAAAGCTTAAA 1375 Query 1355 GCATCTAGGAATCAAGATTTTAACAAATCTAGAGGCTTCCATTGGATTAAAAGCAAGGAA 1414 |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| ||| Sbjct 1376 GCATCTAGGAATCAAGATTTTAACAAATCTAGAGACTTCAATTGGATTAGAAGCAAAGAA 1435 Query 1415 GGTACA-TGTAATGTAGGAATTAAGAGTTACAG-TCCAATGAATTATGAATTTATATATT 1472 | |||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1436 GTTACAATGTAATGTAGGAATTAAGAGTTACAGATC-AATGAATTATGAATTTATATATT 1494 Query 1473 CTACTATAGTTTTGCCGATACAAGATGAGTGATC 1506 ||| || |||||||| |||||| |||||||||| Sbjct 1495 CTA-TA--GTTTTGCCAATACAAAATGAGTGATC 1525 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74296806600 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5