BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493035
Length=2136
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18300.1 | Symbols: | Trimeric LpxA-like enzyme | chr4:1011... 3001 0.0
AT2G34970.1 | Symbols: | Trimeric LpxA-like enzyme | chr2:1474... 2049 0.0
AT3G02270.1 | Symbols: | Trimeric LpxA-like enzyme | chr3:4489... 904 0.0
> AT4G18300.1 | Symbols: | Trimeric LpxA-like enzyme | chr4:10118852-10120981
FORWARD LENGTH=2130
Length=2130
Score = 3001 bits (1625), Expect = 0.0
Identities = 1972/2138 (92%), Gaps = 30/2138 (1%)
Strand=Plus/Plus
Query 1 ATGGGTGCTCAGAAGAAACCCGCCGTGGCTAGGGTTCGAGATGATTCGGAGGATCTGACT 60
||||||||||||||||||||||| | ||||| |||||| || ||||| |||||||| | |
Sbjct 1 ATGGGTGCTCAGAAGAAACCCGCGGCGGCTAAGGTTCGTGAGGATTCAGAGGATCTAAGT 60
Query 61 CGTCAACGGTTACAAGCCATAGTTCTAGCGGACAGCTTCACCACTCAATTCCGTCCCATA 120
|||||||| ||||||||||| ||||||| |||||||||||||||||||||||| |||||
Sbjct 61 CGTCAACGATTACAAGCCATTCTTCTAGCCGACAGCTTCACCACTCAATTCCGTTCCATA 120
Query 121 ACCCTAGAACGCCCTAAGGTACTATTGCCGCTAGTGAACATCCCGATGATTGATTACACT 180
||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 121 ACCCTAGAACGACCAAAGGTACTATTGCCGATAGTGAACATCCCGATGATTGATTACACT 180
Query 181 TTAGCATGGCTCGAATCAGCTGGAATCGAAGATATTTTCGTGTTCTGTTGTGTTCACTCG 240
||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||| |||
Sbjct 181 TTAGCATGGCTCGAATCAGCTGGGATCGAAGAGGTTTTTGTGTTCTGTTGTGCTCATTCG 240
Query 241 TCCCAGGTCATCGATTACCTAG-AGAAATCCGAATGGTACTCACGCTCAAACCCAAACTT 299
|| ||| ||||||||||||| | ||||||| ||||||||| ||||| |||||||||||||
Sbjct 241 TCGCAGATCATCGATTACCT-GAAGAAATCGGAATGGTACACACGCCCAAACCCAAACTT 299
Query 300 GTTGGTGAGAACGATAGTGTCTCCCAAATCCACCAGTGTTGGAGATGCTCTGCGTTATAT 359
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 300 GTTGGTGAGAACGATAGTGTCTCACAATTCCACCAGTGTTGGAGATGCTCTGCGTTATAT 359
Query 360 ATATGAACAACAGACAGAGACGTCTCAGATTCAAGGTGATTTTGTTCTTGTTAGTGGGGA 419
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 360 CTATGAACAACAGACAGAGACGTCGCAGATTCAAGGTGATTTTGTTCTTGTTAGTGGTGA 419
Query 420 TACTGTTAGTAATATGCCACTTGCTGATTTGATTCAAGAACATAGAGATAGGAAGAAGAA 479
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 420 TACTGTTAGTAATATGCCACTTGCTGATTTGATTCAACAACATAGAGATAGGAAGAAGAA 479
Query 480 AGATGAGAAAGCTATCATGACTATGGTTATTAAGAAGCAGTCTAGACTAGGATTAGGATC 539
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 480 AGATGAGAAAGCTATCATGACTATGGTTTTTAAGAAGCAGTCTAGACTAGGAATAGGATC 539
Query 540 TGATCAACTCTTCATTGCGGTAGATCCTTTAACGAAACAGCTTGTTCGTTACGAGGAAGG 599
|||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||| |
Sbjct 540 TGATCAACTCTTTGTTGCAGTAGATCCTTTAACGAAACAGCTTCTTCATTACGAGGAATG 599
Query 600 TAATGCGAGAATCGGGGACGTTTGCTTAGATAAGTCATTGTTGGATAGTACTGTTTTACT 659
|||| ||||| ||||||| |||||||||||||||| |||||||||||||||| ||| |
Sbjct 600 TAATTCGAGAGGCGGGGACTTTTGCTTAGATAAGTCCTTGTTGGATAGTACTG-TTT--T 656
Query 660 ATGCAATGATATGCAGGATTGTTACATTGACATTTGTTCTCCTGAGGTGCTTAGTCTCTT 719
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 ATGCAGTGATATGCAGGATTGTTACATTGACATTTGTTCTCCTGAGGTGCTTAGTCTCTT 716
Query 720 TGAGGATAACTTTGATTATCAACATCTGCGCCGTCATTTTGTCAATGGTTTGCTTGTTGA 779
||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||
Sbjct 717 TGAGGATAACTTTGATTATCAGCATATGCGCCGTCATTTTGTTAATGGTTTGCTTGTTGA 776
Query 780 TGATATTATGGGTTACAAGATTTTTACTCATGAGATTCAGTCGAGTTTTTATGCTACAAG 839
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||
Sbjct 777 TGATATTATGGGTTACAAGATTTTCACTCATGAGATTCAGTCGAGTTGTTATGCTGCAAG 836
Query 840 GATTGAAAATTTACGGAGCTATGATA-TGGTTAGCAAGAATATAATCCAGAGGTGGACAT 898
||| || ||||||||||||||||| | | ||||||||| |||||||||||||||||||||
Sbjct 837 GATCGACAATTTACGGAGCTATGACACT-GTTAGCAAGGATATAATCCAGAGGTGGACAT 895
Query 899 ACCCGTTCGTACCTGATATCAATTTCAGCGGAAAAT-GCTCTCTAATGCTCGGGAGACAG 957
|||||| ||||||| ||||| |||||||||| ||| || || ||| ||||||||||| |
Sbjct 896 ACCCGTACGTACCTAATATCGATTTCAGCGG-GAATCGCCCTGTAAAGCTCGGGAGACGG 954
Query 958 GGGATATACCGGGCTTCTGATGCAGTTCAATCACGCTCTGCTGATATTGGAGCTTCCACT 1017
|||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||||||
Sbjct 955 GGGATATACCGGGCTTCTGATGCAGTTCAATCACACACTGCAGATGTTGGAGCTTCCACT 1014
Query 1018 GTCATTGGATACGGCACCAGAATTGGTAATGGAGGTAAAATCTTTAACTCTGTTATTGGG 1077
||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1015 GTCATTGGATATGGCACCAAAATTGGTAATGGAGGTAAAATCTATAACTCTGTTATTGGG 1074
Query 1078 AATGGATGTTCTATTGGATCAAATGTCGTGATAGAAGGCTCGTACATATGGAACAATGTT 1137
|| ||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||
Sbjct 1075 AACGGATGTTGTATTGGATCAAATGTGGTGATACAAGGCTCATACATATGGAACAATGTT 1134
Query 1138 ACGATTGAAGATGGGTGTGAGATAAGGAATGCTATTGTCTGTGATGGAGTGAAAATCAGA 1197
||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||
Sbjct 1135 ACGATTGAAGATGGGTGTGAGATAAGGAACGCTATTGTCTGTGATGGTGTGAAAGTCAGA 1194
Query 1198 GCAGGAGCTGTTCTGCAGCCTGGTGTTGTTTTGTCTTTCAATGTTGTAGTTGGGCGGGAC 1257
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1195 GCAGGAGCTGTTCTGCAGCCTGGTGTTGTTTTGTCTTTCAGTGTTGTAGTTGGGCGGGAC 1254
Query 1258 TTTGTTGTACCTGCATATTCAAAGGTCTCTTTACTTCAACAGCCAACTACAGAAGACAGC 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 TTTGTTGTACCTGCATATTCAAAGGTCTCTTTACTTCAACAGCCAACTACAGAAGACAGC 1314
Query 1318 GATGAAGAGATGGAATATGCTGGTAGTAGCAGCGAGACTGCAGATCTTTTATCAGGTGTA 1377
||||||||| |||||||||||| ||||||||||| ||||||||||| || ||||| ||
Sbjct 1315 GATGAAGAGCTGGAATATGCTGATAGTAGCAGCGGGACTGCAGATCATTCGTCAGGCCTA 1374
Query 1378 AATAATTTGCAAATTGAGTCCAAAGCATCTGAGCTTGGTCCTGATGGAACAGGTTACATA 1437
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1375 AATAATTTGCAAATTGAGTCCAAAGCATCTGAGCTTGGTCCTGATGGAGCAGGTTACATC 1434
Query 1438 TGGGAAGTATGTGACAGCGCTCATGATGAGGAGTGGAAACATTCTGTTGTACCAATCCCC 1497
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435 TGGGAAATATGTGACAGCGCTCATGATGAGGAGTGGAAACATTCTGTTGTACCAATCCCC 1494
Query 1498 ATGGATAAACTTGCCGATATCACTCAGGCCATGGACGATGATGACATAGAGGATGAAAGT 1557
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1495 ATGGATAAACTTGCCGATATCACTGGGGCCATGGACGATGATGACATAGAGGATGACATT 1554
Query 1558 GTTGTCCCACCTGCTGGAGAGTTGAAATCCGATACTGATAGTATTAACACTGATGCAAAT 1617
|||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1555 GTTGTCCCACCTTCTGGAGAGTTGAAATCTGATACTGATATTATTAACACTGATGCAAAT 1614
Query 1618 GATGACTATGGCTACTTTGAGAGAGAGGTTGAAGAA-ACCTTCTTAA-TGGCCATT-ATT 1674
||| ||||||| ||||||||||||||||||||||| | ||||||| || || || |
Sbjct 1615 GATTCCTATGGCGACTTTGAGAGAGAGGTTGAAGAAGAA-TTCTTAAGTG-CCGTTGAA- 1671
Query 1675 AAGGATGATCT--G-G-ACCAT-GTAATTCGCTT-GATTAACTCACGCCGATTTGCGTAC 1728
|||||| | | | | || || ||||||| ||| ||||||||||| ||| || ||||||
Sbjct 1672 AAGGATAA-CAAAGCGGAC-ATTGTAATTC-CTTTGATTAACTCACACCGGTTGGCGTAC 1728
Query 1729 AACATGG-CATCTGCAGATTGTGCTGGAGCAGTATTCTACTCTATGATGAGACTGGCAGT 1787
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1729 AACATGGAC-TCTGCAGATTGTGCTGGAGCAGTATTCTACTCTATGATGAGACTGGCAGT 1787
Query 1788 AAATACTCCACATAATTCTGCTAGTGAATTGTACAGAAACGCAACGACTATCATTACTAA 1847
||| | ||||||||||||||||| |||||||||||||||||| | | | |||| |||||
Sbjct 1788 AAAGAGTCCACATAATTCTGCTACTGAATTGTACAGAAACGCGATGGGTGTCATAACTAA 1847
Query 1848 ATGGAAGGGACTTCTTGGGTTTTATTTAAAGCAAATTGATGAACAGATAGAGGTGATGAT 1907
|||||||||| |||||||||| ||||||||||||| ||||| ||||||||| ||||| ||
Sbjct 1848 ATGGAAGGGAGTTCTTGGGTTCTATTTAAAGCAAACTGATGCACAGATAGAAGTGATAAT 1907
Query 1908 GAAATTCGAAGAGATGTGTGAGGAATCTGAAGAGTTGGGGCCTTTGTTTGCTAAGA-TTG 1966
||||||||||||||||||| ||||||||||||||||| | |||||||||||||| | ||
Sbjct 1908 GAAATTCGAAGAGATGTGTCAGGAATCTGAAGAGTTGAGCCCTTTGTTTGCTAA-ACTTC 1966
Query 1967 TGCATTTTCTGTATGACAAAGACGTGGTGCAAGAAGATGCGATATTGAGATGGGGGGAAG 2026
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1967 TGCCTTTTCTGTATGACAAAGACGTGGTGCAAGAAGATGCGATCTTGAGATGGGGGGAAG 2026
Query 2027 AGAAAGCAGGCGCAGACGAATCTGACAAAGTTTATCTGAA-ACAATGTGAGGCATTCATA 2085
|||||||||| |||||||| | |||||||||||||||||| | |||||||| ||||||||
Sbjct 2027 AGAAAGCAGGAGCAGACGATTGTGACAAAGTTTATCTGAATA-AATGTGAGTCATTCATA 2085
Query 2086 CAGTGGCTCAAGGAAGCATCTGAGGAGgaagaagaaga 2123
|||||||||||||||||||||||||||||||||||||
Sbjct 2086 AAGTGGCTCAAGGAAGCATCTGAGGAGGAAGAAGAAGA 2123
> AT2G34970.1 | Symbols: | Trimeric LpxA-like enzyme | chr2:14746307-14748781
FORWARD LENGTH=2475
Length=2475
Score = 2049 bits (1109), Expect = 0.0
Identities = 1858/2206 (84%), Gaps = 105/2206 (5%)
Strand=Plus/Plus
Query 1 ATGGGTGCTCAGAAGAAA--C-CCGCCGTGGCTAGGG-TTCGAGATGATTCGGAGGAT-C 55
|||||||||||||||||| | ||||| ||||||| ||| ||| ||| |||||| | |
Sbjct 34 ATGGGTGCTCAGAAGAAAGGCGGCGCCGCCGCTAGGGTTTC-AGAGGATGCGGAGG-TAC 91
Query 56 TGACTCGTCAACGGTTACAAGCCATAGTTCTAGCGGACAGCTTCACCACTCAATTCCGTC 115
|| ||| || || || ||||| || |||| || ||||| ||| |||| |||| ||||
Sbjct 92 AGAGTCGCCACCGATTGCAAGCAATTCTTCTTGCCGACAGTTTCGCCACGAAATTTCGTC 151
Query 116 CCATAACCCTAGAACGCCCTAAGGTACTATTGCCGCTAGTGAACATCCCGATGATTGATT 175
|| |||||||||||||||| |||||||| || ||| |||| || | |||||||||||||
Sbjct 152 CCGTAACCCTAGAACGCCCAAAGGTACTGTTACCGATAGTTAATGTTCCGATGATTGATT 211
Query 176 ACACTTTAGCATGGCTCGAATCAGCTGGAATCGAAGATATTTTCGTGTTCTGTTGTGTTC 235
|||| || |||||||||||||| |||||||| || || ||||||| |||||||||| ||
Sbjct 212 ACACATTGGCATGGCTCGAATCTGCTGGAATAGAGGAGGTTTTCGTCTTCTGTTGTGCTC 271
Query 236 ACTCG-TCCCAGGTCATCGATTACCTAGAGAAATCCGAATGGTACTCACGCTCAAACCCA 294
| ||| | ||||| ||||| || || ||||||||||| ||||| | || | | |||
Sbjct 272 ATTCGAT-GCAGGTTATCGAATATCTGGAGAAATCCGAGTGGTA-T-TCG--C--ATCCA 324
Query 295 AACTTG-TTGGTGAGAACGATAGTGTCTCCCAAATCCACCAGTGTTGGAGATGCTCTGCG 353
|||||| || ||||||||||| | ||| | |||||||| ||||| |||||||||| ||||
Sbjct 325 AACTTGCTT-GTGAGAACGATTGAGTCGCACAAATCCATCAGTGCTGGAGATGCTTTGCG 383
Query 354 TTATATATATGAACAACAGACAGAGACGTCTCAGATTCAAGGTGATTTTGTTCTTGTTAG 413
||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 384 TTACATGTATGAACAACAGACAGAGACGTCTCAGATTCAAGGTGATTTCGTTCTTGTTAG 443
Query 414 TGGGGATACTGTTAGTAATATGCCACTTGCTGATTTGATTCAAGAACATAGAGATAGGAA 473
||| |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 444 TGGAGATACTGTGAGTAATATGCCACTTGCTGATTTGATTCAAGAGCATAGAGAGAGGAA 503
Query 474 GAAGAAAGATGAGAAAGCTATCATGACTATGGTTATTAAGAAG-C---A----GT---C- 521
||||||||||||||||||||| |||||||||||||||||| || | | | |
Sbjct 504 GAAGAAAGATGAGAAAGCTATTATGACTATGGTTATTAAGCAGTCTAAATCTTCTCCACT 563
Query 522 TA-G-A-C--T-AGGATTAGGATCTGATCAACTCTTCATTGCGGTAGATCCTTTAACGAA 575
|| | | | | | |||||||| | ||||| || |||||||| || |||||||| || ||
Sbjct 564 TACGCATCAGTCAAGATTAGGAACAGATCAGCTTTTCATTGCTGTTGATCCTTTGAC-AA 622
Query 576 A-CAGCTTGTTCGTTACGAGGAAGGT-A-ATGCGAGAAT-C--G-GGGAC-GTTTGCTTA 627
| |||||| ||| ||||||||||| | | || || || | | ||| | |||||||||
Sbjct 623 AGCAGCTTCTTCATTACGAGGAAGATAAGAT-TGATCATCCAAGTGGGTCAGTTTGCTTA 681
Query 628 GATAAGTCATTGTTGGATAGT-A-----CTGTTTTACTATGCAATGATATGCAGGATTGT 681
|| |||||||||||||||| | | |||||||| ||||||||||||||||||||||
Sbjct 682 GAGAAGTCATTGTTGGATACTAATCCTTCTGTTTTAGTATGCAATGATATGCAGGATTGC 741
Query 682 TACATTGACATTTGTTCTCCTGAGGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAA 741
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 742 TACATTGACATATGTTCTCCTGAAGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAA 801
Query 742 CATCTGCGCCGTCATTTTGTCAATGGTTTGCTTGTTGATGATATTATGGGTTACAAGATT 801
|||||||| |||||||||||||| ||| ||||||| ||||||||||||||||| || ||
Sbjct 802 CATCTGCGTCGTCATTTTGTCAAAGGTGTGCTTGTGGATGATATTATGGGTTATAAAATC 861
Query 802 TTTACTCATGAGATTCAGTCGAGTTTTTATGCTACAAGGATTGAAAATTTACGGAGCTAT 861
|| |||||||||||||| ||||| |||||| |||||||| ||||| || ||||||
Sbjct 862 TTCACTCATGAGATTCACTCGAG---CTATGCTGGTAGGATTGATAATTTCCGAAGCTAT 918
Query 862 GATA-TGGTTAGCAAGAATATAATCCAGAGGTGGACATACCCGTT-CGTACCTGATATCA 919
|| | | ||||||||| ||||||| |||||||||||||| || || ||||| ||||| |
Sbjct 919 GACACT-GTTAGCAAGGATATAATTCAGAGGTGGACATATCC-TTATGTACCAGATATTA 976
Query 920 ATTTCAGCGGAAAAT--GCTCTCTAATGCTCGGGAGACAGGGGATATACCGGGCTTCTGA 977
||||||| || |||| || |||||| |||||||||||| ||||||||| |||||||||
Sbjct 977 ATTTCAGTGG-AAATCGGC-CTCTAAAGCTCGGGAGACAAGGGATATACAAGGCTTCTGA 1034
Query 978 TGCAGTTCAATCACGCTCTGCTGATATTGGAGCTTCCACTGTCATTGGATACGGCACCAG 1037
|| |||||||||||| ||||||||| |||||||||| ||||||||||||||||| || |
Sbjct 1035 TGTAGTTCAATCACGATCTGCTGATGTTGGAGCTTCTACTGTCATTGGATACGGTACGAA 1094
Query 1038 AATTGGTAATGGAGG-TAAAATCTTTAACTCTGTTATTGGGAATGGATGTTCTATTGGAT 1096
||||||| |||| || ||||||| | ||||| ||||||||||||||||| ||||||||||
Sbjct 1095 AATTGGTCATGG-GGATAAAATCATGAACTCGGTTATTGGGAATGGATGCTCTATTGGAT 1153
Query 1097 CAAATGTCGTGATAGAAGGCTCGTACATATGGAACAATGTTACGATTGAAGATGGGTGTG 1156
||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1154 CAAATGTGGTGATTGAAGGCTCATACATATGGAACAATGTTACTATTGAAGATGGGTGTG 1213
Query 1157 AGATAAGGAATGCTATTGTCTGTGATGGAGTGAAAATCAGAGCAGGAGCTGTTCTGCAGC 1216
|||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1214 AGATAAGGAACGCTATTGTGTGTGATGGGGTGAAAATCAGAGCAGGAGCTGTTCTGCAGC 1273
Query 1217 CTGGTGTTGTTTTGTCTTTCAATGTTGTAGTTGGGCGGGACTTTGTTGTACCTGCATATT 1276
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct 1274 CTGGTGTTGTTTTGTCTTTCAATGTTGTAGTTGGACGGGACTTTGTTGTGCCTGCATACT 1333
Query 1277 CAAAGGTCTCTTTACTTCAACAGCCAACTACAGAAGACAGCGATGAAGAGATGGAATATG 1336
||||||| || |||||||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct 1334 CAAAGGTTTCCCTACTTCAACAGCCAACGACAGAAGACAGTGATGAAGAGCTGGAATATG 1393
Query 1337 CTGGTAGTAGCAGCGAGACTGCAGATCTTTTATCAGGTGTAAATAATTTGCAAATTGAGT 1396
||| ||||||||||| |||||| |||| ||| ||||| ||||| | |||||| ||||
Sbjct 1394 CTGATAGTAGCAGCGGGACTGCGGATCATTTGTCAGGCCTAAATC-T--GCAAATGGAGT 1450
Query 1397 CCAAAGCATCTGAGCTTGGTCCTGATGGAACAGGTTACATATGGGAAGTATGTGACAGCG 1456
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct 1451 CCAAAGCATCTGAGCTTGGTCCTGATGGAGCAGGTTACATATGGGAAGTATGTGA-AGGG 1509
Query 1457 -CTCATGATGAGGAGTGGAAACATTCTGTTGTACCAATCCCCATGGATAAACTTGCCGAT 1515
||||||||||||||||||| |||||||||| ||||||||||| |||||||||| | ||
Sbjct 1510 GCTCATGATGAGGAGTGGAAGCATTCTGTTGCACCAATCCCCAAGGATAAACTTTCTGAG 1569
Query 1516 ATCACTCAGGCCATGGACGATGATGACATAGAGGATGAAAGTGTTGTCCC-ACCTGCTGG 1574
|| ||||||||||| ||||||||||||| ||| ||||||||||| ||||| || | ||||
Sbjct 1570 ATTACTCAGGCCATAGACGATGATGACACAGATGATGAAAGTGTCGTCCCGACTT-CTGG 1628
Query 1575 AGAGTTGAAATCCGATACTGATAGTATTAACACTGATGCAAATGATGACTATG--G---- 1628
|||||||||||| ||| ||||||||||||||||||||| |||||| | ||| |
Sbjct 1629 AGAGTTGAAATCTGATGCTGATAGTATTAACACTGATGTGAATGATCCCAATGATGATTA 1688
Query 1629 CTA---CTTTGAGAGAGAGGTTGAAGAAACCTTCTTAATGGCCATTATTAAG-GA-TGAT 1683
||| |||||||| ||||||||||| ||| |||||| ||| || ||| || | ||
Sbjct 1689 CTATTACTTTGAGAAAGAGGTTGAAGGGACCGTCTTAAGGGCTGTTG--AAGAGAAT-AT 1745
Query 1684 C----TGGACCATGTAA-T-TCGCTTGATTAACTCAC-GCCGATT-TGCGTACAACATGG 1735
| |||||| ||||| | | | ||||||| | || | || | | | ||||||||
Sbjct 1746 CAAAGTGGACCTTGTAACTATGGA--GATTAACGGGCTGCGG-TTGT-CATTCAACATGG 1801
Query 1736 CATCTGCAGATTGTGCTGGAGCAGTATTCTACTCTATGATGAGACTGGCAGTAAATACTC 1795
|||||||||||||||||||||| ||| | ||| ||||| | ||||||| | ||||||
Sbjct 1802 AATCTGCAGATTGTGCTGGAGCAACATTTTTCTCGATGATAAAACTGGCACTTGATACTC 1861
Query 1796 CACATAATTCTGCTAGTGAATTGTACAGAAACGCAACGACTATCATTACTAAATGGAAGG 1855
|||| ||||||| |||||| ||||| | ||||||| ||| ||||||||| ||||||||||
Sbjct 1862 CACACAATTCTGGTAGTGAGTTGTATAAAAACGCAGCGAGTATCATTACAAAATGGAAGG 1921
Query 1856 GA-CTTCTTGGGTTTTATTTAAAGCAAATTGATGAACAGATAGAGGTGATGATGAAATTC 1914
| |||||||| || || |||| ||||||||||||||||||| ||||| ||||||||
Sbjct 1922 -ATCTTCTTGGCTTCTACGCAAAGAAAATTGATGAACAGATAGAAGTGATCATGAAATTT 1980
Query 1915 GAAGAGATGTGTGAGGAATCTGA-A--GAGTTGGGGCCTTTGTTTGCT-AAGATTGTGCA 1970
|||||||||||| |||||||| | | |||||||| |||||||| | || ||| | ||
Sbjct 1981 GAAGAGATGTGTCAGGAATCTCACAAAGAGTTGGGCCCTTTGTTCACACAA-ATTCTACA 2039
Query 1971 TTTTCTGTATGACAAAGACGTGGTGCAAGAAGATGCGATATTGAGATGGGGGGAAGAGAA 2030
| |||| |||||||| |||||| ||||||||||||||||| ||||||||| |||||||||
Sbjct 2040 TCTTCTATATGACAAGGACGTGTTGCAAGAAGATGCGATACTGAGATGGGAGGAAGAGAA 2099
Query 2031 AGCAGGCGCAGACGAATCTGACAAAGTTTATCTGAAACAATGTGAGGCATTCATACAGTG 2090
|||||||| || ||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct 2100 GGCAGGCGCGGATGAAGCTGACAAAGTATATCTGAAACAATGTGATACATTCATACAGTG 2159
Query 2091 GCTCAAGGAAGCATCTGAGGAGgaagaagaagaagaagaTAGCTGA 2136
|||||| |||||||||||||||||||| ||||| || || || |||
Sbjct 2160 GCTCAAAGAAGCATCTGAGGAGGAAGATGAAGATGATGA-AGATGA 2204
> AT3G02270.1 | Symbols: | Trimeric LpxA-like enzyme | chr3:448977-451007
REVERSE LENGTH=2031
Length=2031
Score = 904 bits (489), Expect = 0.0
Identities = 1045/1298 (81%), Gaps = 99/1298 (8%)
Strand=Plus/Plus
Query 61 CGTCAACGGTTACAAGCCATAGTTCTAGCGGACAGCTTCACCACTCAATTCCGTCCCATA 120
|||||||||||||||||||| |||| || ||||| ||| |||| || ||| |||| ||
Sbjct 64 CGTCAACGGTTACAAGCCATTCTTCTCGCTGACAGTTTCGCCACGAAACTCCTTCCCTTA 123
Query 121 ACCCTAGAACGCCCTAAGGTAC-TATTGCCGCTAGTGAACA-TCCCGATGATTGATTACA 178
||| |||||||||| || || | | || ||||||||||| | |||| |||||||||||||
Sbjct 124 ACCTTAGAACGCCCCAATGT-CTTGTTACCGCTAGTGAATATTCCC-ATGATTGATTACA 181
Query 179 CTTTAGCATGGCTCGAATCAGCTGGAATCGAAGATA-TTTTCGTGTTCTGTTGTGTTCAC 237
| ||||| ||||||||||| ||||| || ||||| | ||||| | ||| || || |
Sbjct 182 CCTTAGCTTGGCTCGAATCTGCTGGCATAGAAGA-AGTTTTC--G-TCT-TT-TG----C 231
Query 238 TCG-TCCCAGGTCATCGATTACCTAG-AGAAATCCGAATGGTACTCACGCTCAAACCCAA 295
||| | || ||||||||||| || | | || || || ||||||| ||| | || |
Sbjct 232 TCGAT-GCAAGTCATCGATTATCT-GAACAACTCTGACTGGTACT--CGCAC-AA---AG 283
Query 296 ACTTGT-TGGTGAGAACGATAGTGTCTCC-C-AAA-TCCACCAGTGTTGGAGATGCTCTG 351
|||| | ||| | ||| |||| ||| || | ||| |||||||||| ||| |||||| ||
Sbjct 284 ACTT-TACGGTAAAAACTATAGAGTCACCGCAAAACTCCACCAGTGCTGGTGATGCTTTG 342
Query 352 CGTTATATATATGAACAACAGACAGAGACGTCTCAGATTCAAGGTGATTTTGTTCTTGTT 411
|||||||| || || || |||| ||||||||||||||||||||||| ||||||||||||
Sbjct 343 CGTTATATCTACGAGCAGCAGATTGAGACGTCTCAGATTCAAGGTGACTTTGTTCTTGTT 402
Query 412 AGTGG-GGATACTGTTAGTAATATGCCACTTG-CTG-ATTTGATTCAAGAACATAGAGAT 468
| ||| | || ||||||||| ||||| | || | | | ||||||||||||| ||||||
Sbjct 403 AATGGATG-TATTGTTAGTAACATGCC-CCTGAC-GCAGCTGATTCAAGAACACAGAGAT 459
Query 469 AGGAAGAAGAAAGATGAGAAAGCTATCATGACTATGGTTATTAAGAAGCAGTCTAGACTA 528
|| || |||||||||||||||||||||||||||||||||| | || | ||||| |||
Sbjct 460 AGAAAAAAGAAAGATGAGAAAGCTATCATGACTATGGTTA-TCAG-A-CAGTC---ACT- 512
Query 529 GGATTA-GGATCTGATCAACTCTTCATTGCGGTAGATCCTTTAACGAAACAGCTTGTTCG 587
|| | |||| ||||||||||||| || ||| |||||||||| ||||||||| ||
Sbjct 513 -CATCACCGATC--ATCAACTCTTCATCGCTGTAAATCCTTTAACAAAACAGCTTCTTTA 569
Query 588 TTACGAGGAAGGTAATGCGAGAATCGGGGACGTTTGCTTAGATAAGTCATTGTTGGA--- 644
|||||| | ||| | | || | | | ||||| ||||| |||||| ||||
Sbjct 570 TTACGATG-AGG--A--C---AA-C----A--TCTGCTTCGATAAATCATTGCTGGATCG 614
Query 645 TAGT--A-CTGTTTTACTATGCAATGATATGCAGGATTGTTACATTGACATTTGTTCTCC 701
|| | | ||||||| |||| | ||||||||||||||||||||||||||| |||||||
Sbjct 615 TAATCCATCTGTTTTGTTATGTAGTGATATGCAGGATTGTTACATTGACATATGTTCTCT 674
Query 702 TGAGGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAACATCTGCGCCGTCATTTTGT 761
||||||||||||||| |||| ||||||||| ||||| |||||| |||| || |||||||
Sbjct 675 TGAGGTGCTTAGTCTATTTGTGGATAACTTCGATTACCAACATATGCGTTGTGATTTTGT 734
Query 762 C-AATGGT-TTGCTTGTTGATGATATTATGGGTTACAAGATTTTTACTCATGAGATTCAG 819
|| ||| || |||| |||||| ||||| |||||||||||||| |||||||||||| ||
Sbjct 735 GGAA-GGTGTT-CTTGCTGATGACATTATCGGTTACAAGATTTTCACTCATGAGATT-AG 791
Query 820 -TCGAGTTTTTATGCTACAAGGATTGAAAATTT-ACGGAGCTATGATATGGTTAGCAAGA 877
||| ||| ||||| | |||||||||||||| | |||||||||| ||||| ||||||
Sbjct 792 CTCGTGTT---ATGCTTCTAGGATTGAAAATTTCA-GGAGCTATGACATGGTGAGCAAGG 847
Query 878 ATATAATCCAGAGGTGGACATACCCGT-TCGTACCTGATATCAATTTCAGCGGAAAAT-G 935
|||||||||||||| |||||| ||||| | ||||| ||||| || ||||||||||| | |
Sbjct 848 ATATAATCCAGAGGCGGACATTCCCGTAT-GTACCGGATATGAAGTTCAGCGGAAA-TCG 905
Query 936 CTCTCT-AATGCTCGGGAGACAGGGGATATACCGGGCTTCTGATGC-AGTTCAATCACGC 993
| |||| || ||||| |||||| ||||| ||| |||||||||||| | | || | || |
Sbjct 906 CACTCTTAA-GCTCGAGAGACAAGGGATCTACAAGGCTTCTGATGCTACT-CAGTTAC-C 962
Query 994 -TCTGCTGATATTGGAGCTTCC-ACTGTCATTGGATACGGCACCAGA-ATTGGTAATGG- 1049
|||||| || ||||||||||| | |||||||||| | | ||| | | ||||| | |||
Sbjct 963 ATCTGCTCATGTTGGAGCTTCCTA-TGTCATTGGACATGCCACAA-ATATTGGGAGTGGG 1020
Query 1050 AGGTAAAATCTTTAACTCTGTTATTGGGAATGGATGTTCTATTGGATCAAATGTCGTGAT 1109
| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1021 AC-TAAGATCTTGAACTCTGTTATTGGGAATGGATGTTCTATTGGATCAAATGTGGTGAT 1079
Query 1110 AGAAGGCTCGTACATATGGAACAATGTTACGATTGAAGATGGGTGTGAGATAAGGAATGC 1169
||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 1080 CCAAGGCTCATACATATGGAACAATGTTACGGTTGAAGATGGATGTGAGATAAGGAATGC 1139
Query 1170 TATTGTCTGTGATGGAG-TGAAAATCAGAGCAGGAGCTGTTCTGCAGCCTGGTGTTGTTT 1228
|||||| ||||||| || ||||| | | ||||||||| || || | ||||||||||| |
Sbjct 1140 TATTGTATGTGATG-AGGTGAAAGTGTGTGCAGGAGCTATTGTGAAACCTGGTGTTGTGT 1198
Query 1229 TGTCTTTCAATGTTGTAGTTGGGCGGGACTTTGTTGTACCTGCATATTCAAAGGTCTCTT 1288
||||||| || |||||||| ||| |||||||||||||||||||||||||| |||| ||
Sbjct 1199 TGTCTTTTAAGGTTGTAGTCGGGAGGGACTTTGTTGTACCTGCATATTCACAGGTTTCAC 1258
Query 1289 TACTTCAACAGCCAACTACA-GAAGACAGCGATGAAGA 1325
|||| | ||| |||| | | |||||||| ||||||||
Sbjct 1259 TACTCCGACAACCAA-TGGAAGAAGACAGTGATGAAGA 1295
Score = 387 bits (209), Expect = 3e-106
Identities = 568/733 (77%), Gaps = 58/733 (8%)
Strand=Plus/Plus
Query 1405 TCTGAGCTTGGTCCTGATGGAACAGGTTACATATGGGAAGTATGTGACAGCGCTCATGAT 1464
||| ||||||||| ||||||| |||||||||||| | | | | |||| | |||
Sbjct 1330 TCTAAGCTTGGTCTTGATGGAGCAGGTTACATAT--G--G--CGCCA-AGCG-T-GTGAA 1380
Query 1465 GAGGAGTGGAAACATTCTGTTGTACCAATCCCCATGGATAAACTTGCCGATATCACTCAG 1524
|| |||||||| ||||||||| ||||||||||| ||||||||||| || |||| | ||
Sbjct 1381 GACGAGTGGAAGCATTCTGTTCCACCAATCCCCAAAGATAAACTTGCTGAGATCATTAAG 1440
Query 1525 GCCATGGACGATGATGACATAGAGGATGAAAGTGTTGTCCCACCTGCTGGAGAGTTGAAA 1584
||||| ||||||||||||| || ||||||||||||||| || || | || || ||
Sbjct 1441 GCCATTGACGATGATGACACGGATGATGAAAGTGTTGTCACAACTTCCGGCGA--TG--- 1495
Query 1585 TCCGATACTGATAGTATTAACACTGATGCAAATGATGACTATGGCTACTTTGAGAGAGAG 1644
| |||| ||||||||||| ||| || | || | | ||||||||||||||
Sbjct 1496 -CTAATAC---TAGTATTAACA---ATG---AT-CT--CT-TTG--ACTTTGAGAGAGAG 1539
Query 1645 GTTGAAGAAACCTTCTTAATGGCCATTAT-TAAG-G-ATGA-TCT-G--GACCATG-TAA 1696
||||| | |||||||||| || | | | ||| | || | | | | |||| ||
Sbjct 1540 GTTGATGGCACCTTCTTAA-GGGC--TGTCGAAGAGAAT-ATTGTAGCCGACCTTGCGGT 1595
Query 1697 TTCGCTTGATTAACTCACGCCGATTTG-CGTACAACATGGCATCTGCAGATTGTGCTGGA 1755
|| | ||| ||||||| ||| ||| | || ||||||| ||||||| ||||||||||
Sbjct 1596 TTTG-GAGATAAACTCACTCCG-GTTGTCATATAACATGGAATCTGCACATTGTGCTGGT 1653
Query 1756 GCAGTATTCTACTCTATGATGAGACTGGCAGTAAATACTCCACATAATTCTGCTAGTGAA 1815
||| |||||||||||||||||| ||| ||||| | ||||||||||| ||| || |||
Sbjct 1654 GCAATATTCTACTCTATGATGAAACTAGCAGTTAGTACTCCACATAGCTCTATTAATGAC 1713
Query 1816 TTGTACAGAAACGCAACGACTATCATTACTAAATGGAAGGGACTTCTTGGGTTTTATTTA 1875
||||| ||||||||| ||| |||||||||| ||||||||||||||||||||| ||| ||
Sbjct 1714 TTGTATAGAAACGCATCGAGTATCATTACTCGATGGAAGGGACTTCTTGGGTTCTATGTA 1773
Query 1876 AAGCAAATTGATGAACAGATAGAGGTGATGAT-GAAATTCGAAGAGATGTGTGAGGAATC 1934
||| ||| ||||||||||||||| || || || || ||| |||||||||||||| |||||
Sbjct 1774 AAGAAAAGTGATGAACAGATAGAAGTAAT-ATCGAGATTGGAAGAGATGTGTGAAGAATC 1832
Query 1935 TG---AAGAGTTGGGGCCTTTGTTTGCTAAGATTGTGCATTTTCTGTAT---G-ACA-AA 1986
|| | |||||||| ||||||||||| | ||| | | || | ||||| | | | ||
Sbjct 1833 TGCTCATGAGTTGGGAACTTTGTTTGCTCATATTTTACGTTATATGTATGAGGAAGAGAA 1892
Query 1987 -GACGTGGTGCAAGAAGATGCGATATTGAGATGGGGGGAAGAGAAAGCAGGCGCAGACGA 2045
||| | ||||||||| ||| || ||||||||| ||| |||||||| || || || ||
Sbjct 1893 TGACCTTTTGCAAGAAGTTGCAATCTTGAGATGGTCGGATGAGAAAGCCGGAGCTGATGA 1952
Query 2046 ATCTGACAAAGTTTATCTGAAACAATGTGAGGCATTCATA-CAGTGGCTCAAGGAAGCAT 2104
||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||| |||
Sbjct 1953 ATCTGACAAAGTTTATCTGAAACAATGCGAGCCATTCATAAC-GTGGCTCAAGGAAACAT 2011
Query 2105 CTGAGGAGgaaga 2117
|||| || |||||
Sbjct 2012 CTGACGATGAAGA 2024
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105923149950
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5