BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493046
Length=1486
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18210.1 | Symbols: ATPUP10, PUP10 | purine permease 10 | ch... 2335 0.0
AT4G18220.1 | Symbols: | Drug/metabolite transporter superfami... 1358 0.0
> AT4G18210.1 | Symbols: ATPUP10, PUP10 | purine permease 10 |
chr4:10076079-10077748 FORWARD LENGTH=1522
Length=1522
Score = 2335 bits (1264), Expect = 0.0
Identities = 1414/1488 (95%), Gaps = 4/1488 (0%)
Strand=Plus/Plus
Query 1 AGCAATCACTTGGTAGCATT-TGCAATCAAGAGAATTAATAATAAGATACGTTAGTTCCT 59
|||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||||||
Sbjct 1 AGCAATCACTTGGTAGCATTAT-CAACCAAGAGAATTGATAATAAGATACGTTAGTTCCT 59
Query 60 CCTTGTCCATCTCCAAGGAGGTGATTCCACATCCACCATGACCGCGGATCAAGAACTACA 119
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 60 CCTTGTCCATCTCCAAGGTGGTGATTCCACATCCACCATGACGGCGGATCAAGAACTACA 119
Query 120 AGTCATCGTTCAGCAGGGAAAAGAACCAAATCCAACAGTTCAAGATGAAAGAAATTCGGT 179
| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 120 AATCATTGTTCGGCAGGGAAAAGAACCAAATCCAACAGTTCAAGATGAAAGAAATTCAGT 179
Query 180 CAGTAGCAGCCAAACAGAAGTATCTCGCTCTAACACGTACAAACGGTGGCTCCGGGTGTC 239
||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||| |
Sbjct 180 CAGTAGCAGCCAAGCAGAAGTATCTCACTCTAACACATACAAACGGTGGCTCAGGGTGAC 239
Query 240 TCTCTATACATTTTTTGTCATTTCAGGCCAAACAGTTGCTACAATTTTGGGCAGACTATA 299
| | |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 240 TTTATATACATTCTTTGTCATTTCAGGCCAAACAGTTGCTACAATTTTGGGCAGAGTATA 299
Query 300 CTATGACAACGGAGGAAACAGTAAATGGCTAGCAACGGTAGTTCAACTTGTTGGCTTTCC 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 CTATGACAACGGAGGAAACAGTAAATGGCTAGCAACGGTAGTTCAACTTGTTGGCTTTCC 359
Query 360 TGTTCTACTTCCATATTATCTCATGTCAATCAAAACACATGCAACAACTCATAGAGATGG 419
||| ||||||||||||||| || ||||| | |||||||||||||||||| ||||||||||
Sbjct 360 TGTGCTACTTCCATATTATATCTTGTCATTTAAAACACATGCAACAACTGATAGAGATGG 419
Query 420 AAAAAGAACCTCACCTAGGAACCGTGTATTGGTTTACGTAGTGCTTGGACTTCTTGTAGG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 AAAAAGAACCTCACCTAGGAACCGTGTATTGGTTTACGTAGTGCTTGGACTTCTTGTAGG 479
Query 480 AGCAGATTGCTATCTGTACTCCATCGGACTTCTTTACTTGCCCGTTTCTACATATTCCCT 539
|||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 480 AGCAGATTGCTATCTGTACTCCATTGGACTTCTTTACTTACCCGTTTCTACCTATTCCCT 539
Query 540 GATCTGTGCATCTCAGTTAGCCTTCAATGCTTTCTTCTCTTATTTTCTCAACTCACAAAA 599
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 540 GATCTGTGCATCTCAGTTAGCCTTCAATGCTTTCTTCTCTTATTTTCTTAACTCACAAAA 599
Query 600 ACTAACTCCTATCATTTTGAATTCTCTTTTTCTCCTAACTATATCTTCCACCCTACTTGC 659
||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 600 ACTTACCCCTATCATTTTAAATTCTCTTTTCCTCCTAACTATATCTTCCACCCTACTTGC 659
Query 660 GTTCAATAATGAGGAGTCAAATTCCACAAAAGTTACAAAAGGAGAGTATGTCAAAGGTTT 719
||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct 660 ATTCAATAATGAGGAGACAGACTCCACAAAAGTTACAAAAGGAGAGTATGTCAAAGGTTT 719
Query 720 CATATGCACTGTTGCTGCGTCTGCTGGGTATGGCCTAGTCTTATCCCTACAACAGCTAGC 779
||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 720 CATATGCACCGTTGCTGCGTCTGCTGGTTATGGTCTAGTCTTATCCCTACAACAGCTAGC 779
Query 780 CTTCCTTAAAGTCCTAAAGAGGCAAACTTTCTCAGAAGTTATGGATATGATAATCTACGT 839
||| || ||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 780 CTTTCTAAAAGTCCTAAAGAAGCAAAATTTCTCAGAAGTTATGGATATGATAATCTACGT 839
Query 840 GAGTCTAGTGGCCAGTGGTGTTAGTGTGGTGGGGCTTTTTGCTAGTAGCGAATGGAAAAC 899
|||||||||||||||| ||||||| |||||||||||||||||||| || || ||||||||
Sbjct 840 GAGTCTAGTGGCCAGTTGTGTTAGCGTGGTGGGGCTTTTTGCTAGCAGTGAGTGGAAAAC 899
Query 900 TTTGAGCAGTGAAATGGAAAACTACAAACCTGGGAAGGTATCCTACATTATGAACCTAGT 959
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 900 TTTGAGCAGTGAAATGGATAACTACAAACATGGGAAGGTATCCTACATTATGAACCTAGT 959
Query 960 GTGGACAGCTGTTACCTGGCAGGTATTCTCCATCGGTGGCACAGGACTGATCTTCGAGCT 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 GTGGACAGCTGTTACCTGGCAGGTATTCTCCATCGGTGGCACAGGACTGATCTTCGAGCT 1019
Query 1020 TTCCTCTCTATTCTCAAATGCAATAAGCGTTTTAGGACTCCCCGTGGTTCCCATCCTGGC 1079
|||||||||||||||||||||||||||||||| |||||||| |||||||| ||| ||||
Sbjct 1020 CTCCTCTCTATTCTCAAATGCAATAAGCGTTTTGGGACTCCCAGTGGTTCCTATCTTGGC 1079
Query 1080 TGTAATCATTTTCCATGACAAAATGAATGGGTTAAAGGTGATTTCTATGATCCTAGCTAT 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 TGTAATCATTTTCCATGACAAAATGAATGGGTTAAAGGTGATTTCTATGATCCTAGCTAT 1139
Query 1140 TTGGGGTTTCACTTCCTATGTCTACCAACAATATCTTGATGACAAAAACTTGAAGAAAAG 1199
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 TTGGGGTTTCACTTCCTATGTCTACCAACAATATCTTGATGACAAAAACTTGAAGAAAAA 1199
Query 1200 TCATGGAATCACAACAACAGAATCCCCTGACCCACCAGAAGCAGAAGAGTCAAGTTGGCA 1259
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1200 TCATGAAATCACAACAACAGAATCCCCTGACCCACCAGAAGCAGAAGAGTCAACTTGGCA 1259
Query 1260 ATCAAAATAACCTGAT-TTTTGAAAGATGGTGTCCTGCAGTTTACACACTCAATCAATCT 1318
|||||||||| ||||| |||||||||||| ||||| |||||||||| |||||||||||||
Sbjct 1260 ATCAAAATAAGCTGATATTTTGAAAGATGCTGTCCCGCAGTTTACAGACTCAATCAATCT 1319
Query 1319 GGTTAAG-AAACTTACTTTACTTATCGACCTGGAGGCATCCTACAATGAAGAATACACAA 1377
|||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1320 AGTTAAGTAAACTTACTTTACTTATCGGCCTGGAGGCATCCTACATTGAAGAATACACAA 1379
Query 1378 TACATTTTTGATGCAACTAATGTGAAGTCTCAGCTTGAAATTTTTTGCATCAATGTAACA 1437
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 1380 TACATTTTTGATGCAACTAATGTAAAGTCTCAGCTTGAAATTTTTTGCATCATTGTAACA 1439
Query 1438 GAAAGTAGATTTCATTTAAATAAATACTGAATGACTCTGGTTTAGTTT 1485
| ||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct 1440 GGAAGTAGATTTCATTTAAATAAGTAGTGAATGACTTTGGTTTAGTTT 1487
> AT4G18220.1 | Symbols: | Drug/metabolite transporter superfamily
protein | chr4:10078768-10080109 FORWARD LENGTH=1035
Length=1035
Score = 1358 bits (735), Expect = 0.0
Identities = 920/1010 (91%), Gaps = 10/1010 (1%)
Strand=Plus/Plus
Query 265 GGCCAAACAGTTGCTACAATTTTGGGCAGACTATACTATGACAACGGAGGAAACAGTAAA 324
|||||| |||||||||||||| ||||||||||||||||||| || ||||||||||| |||
Sbjct 31 GGCCAATCAGTTGCTACAATTCTGGGCAGACTATACTATGAAAATGGAGGAAACAGCAAA 90
Query 325 TGGCTAGCAACGGTAGTTCAACTTGTTGGCTTTCCTGTTCTACTTCCATATTATCTCATG 384
|||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||
Sbjct 91 TGGCTAGCAACGGTAGTTCAGCTTGTAGGCTTTCCTATTCTACTTCCATATCATCTCTTG 150
Query 385 TCAATCAAAACACATGCAACAACTCATAGAGATGGAAAAAGAACCTCACCTAGGAACCGT 444
||| ||||||||||| |||||||||| |||||||| ||| |||||||| ||||||||||
Sbjct 151 TCAGTCAAAACACATACAACAACTCAGAGAGATGGCAAATTAACCTCACTTAGGAACCGT 210
Query 445 GTATTGGTTTACGTAGTGCTTGGACTTCTTGTAGGAGCAGATTGCTATCTGTACTCCATC 504
| ||| |||||| ||||||||||||||||||||||||||| |||||| || || |||||
Sbjct 211 GCATTAGTTTACATAGTGCTTGGACTTCTTGTAGGAGCAGCTTGCTACCTATATTCCATT 270
Query 505 GGACTTCTTTACTTGCCCGTTTCTA-CATATTCCCTGATCTGTGCATCTCAGTTAGCCTT 563
||||| |||||| | || ||||||| | | |||||||||||||||||| |||||||||||
Sbjct 271 GGACTGCTTTACCTACCTGTTTCTACCCT-TTCCCTGATCTGTGCATCACAGTTAGCCTT 329
Query 564 CAATGCTTTCTTCTCTTATTTTCTCAACTCACAAAAACTAACTCCTATCATTTTGAATTC 623
|| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 330 CACCGCTTTCTTCTCTTATTTACTCAACTCACAAAAACTTACTCCTATCATTTTGAATTC 389
Query 624 TCTTTTTCTCCTAACTATATCTTCCACCCTACTTGCGTTCAATAATGAGGAGTCAAATTC 683
|||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| ||| ||||
Sbjct 390 TCTTTTCCTCCTCACTATATCTTCCACCCTCCTTGCATTTAATAACGAGGAATCAGATTC 449
Query 684 CACAAAAGTTACAAAAGGAGAGTATGTCAAAGGTTTCATATGCACTGTTGCTGCGTCTGC 743
|| |||||||||||||||||||||||||||||||||| ||||||| |||| ||| |||||
Sbjct 450 CAAAAAAGTTACAAAAGGAGAGTATGTCAAAGGTTTCGTATGCACCGTTGGTGCATCTGC 509
Query 744 TGGGTATGGCCTAGTCTTATCCCTACAACAGCTAGCCTTCCTTAAAGTCCTAAAGAGGCA 803
||||| ||| ||| ||||||||||||||||||||||||| | |||||| |||||| |||
Sbjct 510 TGGGTTTGGTCTACTCTTATCCCTACAACAGCTAGCCTTTCGTAAAGTTTTAAAGAAGCA 569
Query 804 AACTTTCTCAGAAGTTATGGATATGATAATCTACGTGAGTCTAGTGGCCAGTGGTGTTAG 863
|||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct 570 AACTTTCTCAGAAGTTATAAATATGATAATCTACATGAGTCTAGTGGCCAGTTGTGTTAG 629
Query 864 TGTGGTGGGGCTTTTTGCTAGTAGCGAATGGAAAACTTTGAGCAGTGAAATGGAAAACTA 923
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 630 CGTGGTGGGGCTTTTTGCTAGTAGCGAGTGGAAAACTTTGAGCAGTGAAATGGAAAACTA 689
Query 924 CAAACCTGGGAAGGTATCCTACATTATGAACCTAGTGTGGACAGCTGTTACCTGGCAGGT 983
||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 690 CAAACTTGGGAAGGTATCCTATGTCATGAACCTAGTGTGGACAGCTGTTACCTGGCAGGT 749
Query 984 ATTCTCCATCGGTGGCACAGGACTGATCTTCGAGCTTTCCTCTCTATTCTCAAATGCAAT 1043
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 750 ATTCTCCATCGGTTGCACAGGACTGATCTTCGAGCTTTCCTCCCTATTCTCAAATGCAAT 809
Query 1044 AAGCGTTTTAGGACTCCCCGTGGTTCCCATCCTGGCTGTAATCATTTTCCATGACAAAAT 1103
||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 810 AAGCGCTTTGGGACTCCCCGTGGTTCCTATCCTGGCTGTCATCATTTTCCATGACAAAAT 869
Query 1104 GAATGGGTTAAAGGTGATTTCTATGATCCTAGCTATTTGGGGTTTCACT-TCCTATGTCT 1162
||| || |||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct 870 GAACGGCTTAAAGGTGATTTCTATGATTCTAGCTATTTGGGGTTTCG-TATCCTATGTCT 928
Query 1163 ACCAACAATATCTTGATGACAA-AAACTTGAAGAAAAGTCATGGAATCAC-AACAACAGA 1220
||||||||||||||||||| || |||||||||||||||| ||| ||| || |||||||||
Sbjct 929 ACCAACAATATCTTGATGA-AACAAACTTGAAGAAAAGTAATGAAAT-ACCAACAACAGA 986
Query 1221 ATCCCCTGACCCACCAGAAGCAGAAGAGTCAAGTTG-GCAATCAAAATAA 1269
||||||||||| |||||||||||||| ||||||| | |||||||||||||
Sbjct 987 ATCCCCTGACCGACCAGAAGCAGAAGGGTCAAGT-GAGCAATCAAAATAA 1035
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73292795700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5