BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493065
Length=3720
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205... 5792 0.0
AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 | chr3:2300875... 167 8e-40
> AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205-10027415
FORWARD LENGTH=3846
Length=3846
Score = 5792 bits (3136), Expect = 0.0
Identities = 3533/3726 (95%), Gaps = 21/3726 (1%)
Strand=Plus/Plus
Query 1 ATGGAGGAGAAATCTCCGAAGAAGAATGATGGTGGAAATCAGAAAGTGTCGTTTTTCAAA 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGGAGAAATCTTCGAAGAAGAATGATGGTGGAAATCAGAAAGTGTCGTTTTTCAAA 60
Query 61 CTGTTTTCGTTTGCCGACAAAACCGACGTAGTTTTGATGACCGTCGGGACTATCGCCGCC 120
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 61 CTCTTTTCGTTCGCCGACAAAACCGACGTAGTTTTGATGACCGTCGGGACTATTGCCGCC 120
Query 121 ATGGGTAACGGCCTAACTCAGCCGCTCATGACTCTAATCTTTGGCCAGCTCATAAATGCC 180
|||||||||||| ||||||||| |||||||||||||||||||||||||||| || |||
Sbjct 121 GCGGGTAACGGCCTTACTCAGCCGTTCATGACTCTAATCTTTGGCCAGCTCATTAACGCC 180
Query 181 TTTGGCACCACCGATCCAGATCATATGGTTAGAGAAGTGTGGAAGGTTGCTGTAAAGTTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TTTGGCACCACCGATCCAGATCATATGGTTAGAGAAGTGTGGAAGGTTGCTGTAAAGTTT 240
Query 241 ATTTACCTTGCAGTATACTCTGGTGTCGTCGCCTTCCTCCAGGTCTCATGCTGGATGGTT 300
|| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct 241 ATATACCTTGCAGTATACTCTTGTGTCGTCGCATTCCTCCAGGTATCATGCTGGATGGTA 300
Query 301 ACTGGAGAACGTCAATCCGCCACAATTCGTGGTCTATA-CTTGAAAACGATATTAAGACA 359
|| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 301 ACGGGAGAACGTCAATCCGCCACAATTCGTGGTCTATACCTT-AAAACGATATTAAGACA 359
Query 360 AGATATTGGCTACTTCGATACGGAGACAAACACCGGAGAGGTTATTGGAAGAATGTCTGG 419
|||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 360 AGATATTGGCTATTTCGATACTGAGACAAACACCGGAGAGGTTATCGGAAGAATGTCTGG 419
Query 420 AGACACAATTTTGATTCAAGACGCCATGGGAGAAAAGGTTGGAAAATTCATACAACTAGC 479
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
Sbjct 420 AGACACAATTTTGATTCAAGACGCCATGGGAGAAAAGGTTGGCAAATTCACACAACTA-C 478
Query 480 AATG-ACGTTCTTTGGAGGATTCGTGATTGCCTTTTCTAAAGGCTGGCAGTTAACGTTG- 537
||| || ||| |||||||||||| |||||| |||| ||||||| || ||| | | |
Sbjct 479 TATGTACTTTCCTTGGAGGATTCGCGATTGCGTTTTATAAAGGCCCGCTTTTAGC-TGGT 537
Query 538 GTTCTTTGCAGTTGTATCCCTCTGATTGTGATCGCAGGTGCAGCCATGTCTCTGATCATG 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 GTTCTTTGCAGTTGTATCCCTCTGATTGTGATCGCAGGTGCAGCCATGTCTCTGATCATG 597
Query 598 TCTAAAATGGCTGGTCGTGGTCAAGTCGCTTACGCAGAGGCTGGAAACGTAGTTGAACAA 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 TCTAAAATGGCTGGTCGTGGTCAAGTCGCTTACGCAGAGGCTGGAAACGTAGTTGAACAA 657
Query 658 ACCGTCGGAGCCATTAGAACAGTAGTAGCGTTTACGGGGGAGAAACAAGCAACGGAAAAA 717
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 658 ACCGTTGGAGCCATTAGAACAGTAGTAGCGTTTACGGGAGAGAAACAAGCAACGGAAAAA 717
Query 718 TACGAAAGCAAGCTCGAGATAGCTTACAAGACTGTGGTTCAACAGGGTTTGATCTCTGGT 777
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 718 TACGAAAGCAAGCTCGAGATCGCTTACAAGACAGTGGTTCAACAGGGTTTGATCTCTGGT 777
Query 778 CTAGGGCTTGGCACAATGCTAGCTGTGATATTTTGCAGCTACGGTTTAGCGGTTTGGTAT 837
| || ||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||
Sbjct 778 TTCGGCCTTGGTACAATGTTAGCCGTGATCTTTTGCAGCTACGGTTTAGCGGTTTGGTAT 837
Query 838 GGTGCAAAGCTGATAATGGAGAAAGGTTACAATGGCGGACAAGTCATCAATATAATTTTC 897
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 838 GGTGCAAAGCTGATAATGGAGAAAGGTTACAATGGCGGACAAGTCATCAATGTGATTTTT 897
Query 898 GCAGTTTTGACTGGAGGAATGTCATTAGGGCAAACATCGCCGAGTTTGAATGCTTTCGCT 957
||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 898 GCAGTCTTGACCGGAGGAATGTCGTTAGGGCAAACATCGCCAAGTTTGAATGCTTTCGCT 957
Query 958 GCAGGGAGAGCTGCAGCTTTCAAAATGTTCGAAACTATCAAGAGGACTCCAAAGATTGAT 1017
|| || |||||||| |||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 958 GCTGGAAGAGCTGCCGCTTTCAAAATGTTCGAAACGATCAAGAGGAGTCCAAAGATTGAT 1017
Query 1018 GCTTACGATATGAGCGGTTCTGTTCTTGAGGATATTAGAGGAGACATTGAGCTTAAAGAT 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 GCTTACGATATGAGCGGTTCTGTTCTTGAGGATATTAGAGGAGACATTGAGCTTAAAGAT 1077
Query 1078 GTTTACTTTAGGTATCCGGCTAGGCCCGATGTTCAAATCTTTGCTGGATTCTCGCTCTTT 1137
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1078 GTTTACTTTAGGTATCCGGCTAGGCCTGATGTTCAAATCTTTGCTGGATTCTCACTCTTT 1137
Query 1138 GTATCGAACGGCACA-ACAGTTGCTTTGGTGGGACAGAGCGGAAGCGGAAAATCGACAGT 1196
||| | || |||| | || || ||||||||||||||||||||||||||||||||||| ||
Sbjct 1138 GTACCAAATGGCA-AGACGGTGGCTTTGGTGGGACAGAGCGGAAGCGGAAAATCGACGGT 1196
Query 1197 TATCAGTCTAATCGAGAGGTTCTATGATCCGGAGTCAGGTCAAGTATTGATAGACAACAT 1256
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1197 TATCAGTCTAATCGAAAGGTTCTATGATCCGGAGTCAGGACAAGTATTGATAGACAACAT 1256
Query 1257 AGATTTGAAGAAACTTCAGCTCAAATGGATAAGAAGCAAAATCGGTTTGGTTAGCCAAGA 1316
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 TGATTTGAAGAAACTTCAGCTCAAATGGATAAGAAGCAAAATCGGTTTGGTTAGCCAAGA 1316
Query 1317 ACCTGTGTTGTTTGCGACCACAATAAGGGAGAACATTGCTTATGGGAAAGAAGACGCGAC 1376
|||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1317 ACCTGTCTTGTTTGCGACCACGATAAAGGAGAACATTGCTTATGGGAAAGAAGACGCGAC 1376
Query 1377 TGATCAGGAGATTCGAACTGCGATTGAGCTCGCTAATGCGGCTAAATTTATTGATAAACT 1436
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1377 TGATCAAGAGATTCGAACTGCGATTGAGCTCGCTAATGCGGCTAAATTCATTGATAAACT 1436
Query 1437 CCCACAGGGTTTGGATACAATGGTAGGAGAGCACGGGACGCAAATGTCTGGCGGGCAGAA 1496
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1437 CCCACAGGGTTTGGATACAATGGTAGGAGAGCACGGGACACAAATGTCTGGCGGGCAGAA 1496
Query 1497 ACAGAGGCTAGCGATCGCTAGGGCGATTTTGAAAAACCCTAAAATATTGCTTTTAGACGA 1556
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1497 ACAGAGACTAGCAATCGCTAGGGCGATTTTGAAAAACCCTAAAATATTGCTTTTAGATGA 1556
Query 1557 AGCCACAAGCGCGTTAGACGCAGAATCCGAACGCATTGTTCAAGACGCGCTAGTGAACTT 1616
||| |||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct 1557 AGCAACAAGCGCCTTAGACGCAGAATCCGAACGGATTGTTCAAGATGCGCTCGTGAACTT 1616
Query 1617 AATGTCAAATCGGACTACCGTTGTGGTTGCTCACCGTTTGACCACAATTAGAACTGCCGA 1676
||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||| ||
Sbjct 1617 AATGTCAAACCGGACTACCGTTGTGGTCGCTCACCGGTTGACCACAATAAGAACTGCAGA 1676
Query 1677 CGTAATCGCTGTTGTCCACCAAGGGAAAATTGTCGAGAAAGGGACTCACGATGATATGAT 1736
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct 1677 CGTAATCGCTGTTGTCCACCAAGGAAAAATTGTCGAGAAAGGAACTCACGATGAGATGAT 1736
Query 1737 TCAAAATCCTGAGGGAGCTTATTCACAGCTTGTTCGTCTTCAAGAAGGATCAAAAGAAGA 1796
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1737 TCAAGATCCCGAGGGAGCTTATTCACAGCTTGTTCGTCTTCAAGAAGGATCAAAAGAAGA 1796
Query 1797 AGCTAACGAATCAGAGAGACCTGAAACGAGCTTAGACGTCGAGAGATCAGGAAGTCATAG 1856
||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct 1797 AGCTACCGAATCAGAGAGACCTGAAACAAGCTTAGACGTCGAGAGGTCAGGAAGTCTTAG 1856
Query 1857 GTTATCATCGGCAATGAGAAGATCCGTTAGCCGGAATTCATCGAGCAGTCGCCATTCTTT 1916
| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1857 GCTATCATCTGCGATGAGAAGATCCGTTAGCCGGAATTCATCGAGCAGCCGCCATTCTTT 1916
Query 1917 CTCTCTCGCTTCCAATATATTCTTTCCGGGAGCAGTTAACATCAACCAAACCGATGAGAT 1976
|||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||
Sbjct 1917 CTCTCTCGCTTCCAATATGTTCTTTCCGGGAG---TTAACGTCAACCAAACCGACGAGAT 1973
Query 1977 CGAAGACGAGGAAAA-AACCGTGAGACACAAGAAAGTGTCATTAAAACGGCTTGCTCGCC 2035
|||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||| ||
Sbjct 1974 GGAAGACGAGGAAAACAAC-GTGAGGCACAAGAAAGTGTCATTAAAACGACTTGCTCACC 2032
Query 2036 TCAACAAACCGGAAATTCCGGTTTTATTGCTCGGTTCAATTGCTGCAATGGTTCACGGAA 2095
| ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||
Sbjct 2033 TTAACAAACCGGAAATTCCGGTTTTGGTACTCGGTTCAATTGCTGCAATGGTTCATGGAA 2092
Query 2096 CGTTGTTTCCCATCTTCGGTTTACTGCTTTCGAGCTCGATCAATATGTTCTATGAACCAG 2155
|| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||
Sbjct 2093 CGGTGTTTCCCATCTTCGGTTTATTGCTTTCCAGCTCAATCAATATGTTCTATGAACCAG 2152
Query 2156 CAAAGATACTGAAGAAAGATTCACATTTTTGGGCGCTGATTTATATCGCTCTCGGTTTAG 2215
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2153 CAAAGATACTGAAGAAAGATTCACATTTTTGGGCGCTGATTTATATCGCTCTCGGTTTAA 2212
Query 2216 CCAATTTCTTCATGATCCCGATCCAAAACTATTTCTTTGGAATCGCTGGAGGGAAATTGA 2275
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2213 CCAATTTCGTCATGATCCCGGTCCAAAACTATTTCTTTGGAATCGCTGGAGGGAAATTGA 2272
Query 2276 TTAAACGCATCAGATCAATGTGTTTTGATAAAGTGGTTCATCAAGAAATCAGTTGGTTCG 2335
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2273 TTAAACGCATCCGATCAATGTGTTTTGATAAAGTGGTTCATCAAGAAATCAGTTGGTTCG 2332
Query 2336 ATGATACAGCAAATTCCAGCGTGAGGAGTTTGGTAGGAGATGCATTGGCGTTAATAGTAC 2395
|||| ||||| |||||||| | || ||||||||||||||||||||||||||||||||
Sbjct 2333 ATGACACAGCCAATTCCAG-G--AG---TTTGGTAGGAGATGCATTGGCGTTAATAGTAC 2386
Query 2396 AAAACATAGCTACTGTAACCACCGGGTTGATAATAGCGTTTACAGCGAATTGGATGCTAG 2455
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2387 AAAACATAGCTACTGTAACCACTGGGTTGATAATAGCGTTTACAGCGAATTGGATCCTAG 2446
Query 2456 CTCTCATAGTTCTTGCTCTCTCACCATTTATTGTCATCCAAGGATATGCTCAAACCAAGT 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2447 CTCTCATAGTTCTTGCTCTCTCACCATTTATTGTCATCCAAGGATATGCTCAAACCAAGT 2506
Query 2516 TCCTGACTGGTTTCAGCGCAGATGCTAAGGCGATGTATGAAGAAGCGAGTCAAGTGGCGA 2575
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2507 TCTTGACTGGTTTCAGCGCTGATGCTAAGGCGATGTATGAAGAAGCGAGTCAAGTGGCGA 2566
Query 2576 ATGATGCAGTGAGCAGCATTAGAACGGTTGCATCTTTCTGTGCAGAGG-GCAAAGTGATG 2634
||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||
Sbjct 2567 ATGATGCAGTGAGCAGCATAAGAACGGTTGCATCTTTCTGTGCAGAGGAG-AAAGTGATG 2625
Query 2635 GATTTATACCAACAAAAATGCGATGGACCGAAGAAGAACGGTGTTCGGTTAGGTCTTTTG 2694
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2626 GATTTATACCAACAAAAATGCGATGGACCGAAGAAGAACGGTGTCCGGTTAGGTCTTTTG 2685
Query 2695 AGCGGTGCGGGTTTCGGTTTCTCTTTCTTTTTTCTCTATTGCATCAATTGTGTATGTTTC 2754
|||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 2686 AGCGGTGCTGGTTTCGGTTTCTCATTCTTTTTCCTCTATTGCATCAATTGTGTATGTTTC 2745
Query 2755 GTCAGTGGTGCGGGGTTGATTCAAATAGGTAAAGCCACATTTGGTGAAGTCTTCAAGGTT 2814
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2746 GTCAGTGGTGCCGGGTTGATTCAAATTGGTAAAGCCACATTTGGTGAAGTCTTCAAGGTT 2805
Query 2815 TTCTTTGCATTGACGATCATGGCTATTGGAGTTTCTCAAACGAGTGCTATGGCACCTGAT 2874
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2806 TTCTTTGCATTGACGATTATGGCGATTGGAGTTTCTCAAACGAGTGCTATGGCACCTGAT 2865
Query 2875 ACAAACAAAGCTAAAGACTCTGCAGCTTCAATTTTCGATATTCTTGATAGTAAACCAAAG 2934
|||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| |||
Sbjct 2866 TCAAACAAAGCTAAAGACTCTGCAGCTTCGATTTTCGATATTCTCGATAGTACACCGAAG 2925
Query 2935 ATCGATTCGAGCTCTGATGAAGGTACTACGTTACAAAACGTTCATGGCGATATCGAATTC 2994
|| ||||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||
Sbjct 2926 ATTGATTCTAGCTCTGATGAAGGTACAACGTTACAAAACGTTAATGGTGATATCGAATTC 2985
Query 2995 CGACATGTTAGTTTCCGGTACCCGATGCGACCGGACGTTCAGATTTTCCGTGATTTGTGC 3054
||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||
Sbjct 2986 CGACATGTTAGTTTCCGATACCCAATGCGACCGGACGTTCAGATTTTCAGAGATTTGTGC 3045
Query 3055 TTGACTATCCCTTCCGGAAAGACCGTTGCACTTGTTGGAGAGAGCGGGAGCGGGAAATCG 3114
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3046 TTGACTATCCCTTCTGGAAAGACCGTTGCACTTGTTGGAGAGAGCGGGAGCGGGAAATCA 3105
Query 3115 ACGGTGATCAGCATGATTGAGAGGTTTTATAATCCAGATTCAGGCAAGATTTTGATCGAT 3174
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3106 ACGGTGATAAGCATGATTGAGAGGTTTTATAATCCAGATTCAGGCAAGATTTTGATCGAT 3165
Query 3175 CAGGTGGAAATTCAGACATTTAAATTGAGTTGGTTAAGGCAACAGATGGGTTTGGTTAGT 3234
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3166 CAGGTGGAGATTCAGACATTTAAATTGAGTTGGTTAAGGCAACAGATGGGTTTGGTTAGT 3225
Query 3235 CAGGAACCGATTTTGTTCAACGAGACGATCAGATCAAACATAGCTTATGGAAAAACTGGT 3294
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 3226 CAAGAACCGATTTTGTTCAACGAGACGATCAGATCAAACATAGCTTATGGTAAAACCGGT 3285
Query 3295 GGAGCCACAGAGGAAGAGATTATAGCAGCAGCAAAAGCCGCAAATGCACATAACTTCATC 3354
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3286 GGAGCCACAGAGGAAGAGATTATAGCAGCAGCAAAAGCCGCAAACGCACATAACTTCATC 3345
Query 3355 AGCTCATTGCCTCAGGGTTATGATACGTCGGTTGGAGAACGCGGTGTTCAGCTATCGGGC 3414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3346 AGCTCATTGCCTCAGGGTTACGATACGTCGGTTGGAGAACGCGGTGTTCAGCTATCGGGC 3405
Query 3415 GGTCAGAAGCAGAGGATTGCGATTGCGCGTGCGATTTTGAAAGATCCTAAGATCTTGTTG 3474
|||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 3406 GGTCAGAAACAGAGGATTGCGATTGCGCGCGCGATTTTGAAAGATCCTAAGATTTTGTTG 3465
Query 3475 CTCGATGAAGCGACGAGTGCATTGGACGCAGAATCTGAGCGTGTGGTTCAGGATGCGCTT 3534
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 3466 CTTGATGAAGCGACGAGTGCATTGGACGCAGAATCTGAGCGTGTTGTTCAGGATGCACTT 3525
Query 3535 GATCGAGTTATGGTGAATCGAACCACTGTAGTTGTGGCTCATCGGCTCACGACGATTAAG 3594
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3526 GATCGAGTTATGGTTAATCGAACCACTGTAGTTGTGGCTCATCGGCTTACGACGATTAAG 3585
Query 3595 AATGCAGACGTGATTGCGGTTGTGAAAAACGGCGTTATTGCGGAAAAAGGAAGGCATGAG 3654
|| ||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||
Sbjct 3586 AACGCAGACGTGATCGCGGTTGTGAAAAACGGAGTTATTGCTGAGAAAGGAAGGCATGAG 3645
Query 3655 ACACTGATGAAGATTTCAGGTGGCGCTTATGCATCTCTTGTCACTCTGCACATGAGTGCA 3714
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 3646 ACACTGATGAAGATTTCAGGTGGTGCTTATGCTTCTCTTGTCACTCTGCACATGAGTGCA 3705
Query 3715 AATTAA 3720
||||||
Sbjct 3706 AATTAA 3711
> AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755-23013909
REVERSE LENGTH=4143
Length=4143
Score = 167 bits (90), Expect = 8e-40
Identities = 453/624 (73%), Gaps = 42/624 (7%)
Strand=Plus/Plus
Query 3088 GTTGGAGAGAGCGGGAGCGGGAAATCGACGGTGATCAGCAT-GATTGAGAGGTTTTATAA 3146
||||||||||||||||||||||||||||| ||||| || | | | |||||||||| |
Sbjct 3508 GTTGGAGAGAGCGGGAGCGGGAAATCGACAGTGATT-GCGTTGCTACAGAGGTTTTACGA 3566
Query 3147 TCCAGATTCAGG-CAAGAT---T-TTGATCGATCAGGTGGAAATTCAGACATTTAAATTG 3201
|| ||||| || || ||| | ||||| || | || | || ||||||| | ||
Sbjct 3567 CCCTGATTCTGGTCA-GATCACTCTTGATGGA---GTTG-AGATAAAGACATTGCAGCTG 3621
Query 3202 AGTTGGTTAAGGCAACAGAT-GGGTTTGGTTAGTCAGGAACCGATTTTGTTCAACGAGAC 3260
| ||||||||||| || | ||| ||| | || ||||||||| |||||||||| || ||
Sbjct 3622 AAATGGTTAAGGCAGCAAACCGGGCTTG-TGAGCCAGGAACCGGTTTTGTTCAATGAAAC 3680
Query 3261 GATCAGATCAAACATAGCTTATGGAAAAACTGGTGGA-GCCACAGAGGAA--GAGATTA- 3316
||| || ||||||| |||||||| ||| || | | || || || || || || |
Sbjct 3681 GATTAGGGCAAACATTGCTTATGGTAAAGGAGGAG-ATGCTACTGA--AACCGAAAT-AG 3736
Query 3317 TAGCAGCAGCAAAAGCCG-CAAATGCACATAACTTCATCAGCTC-ATTGCCTCAGGGTTA 3374
|| | ||||| | || | || || ||| ||||||||| | | | | ||||| ||
Sbjct 3737 TATCCGCAGCTGA-GCTATCTAACGCTCATGGCTTCATCAG-TGGACTACAACAGGGCTA 3794
Query 3375 TGATACG-TCGGTTGGAGAACGCGGTGTTCAGCTATCGGGCGGTCAGAAGCAGAGGATT- 3432
|||||| | ||| || ||| | || ||||| |||| || || || |||||||| | |
Sbjct 3795 TGATACAAT-GGTGGGTGAAAGAGGAGTTCAATTATCAGGTGGGCAAAAGCAGAG-AGTA 3852
Query 3433 GCGATTGCGC-GTGCGATT-TTGAAAGATCCTAA-GATCTTGTTGCTCGATGAAGCGACG 3489
|| || || | | || || || ||||| ||||| | | ||| | || |||||||| ||
Sbjct 3853 GCCATAGC-CAGAGCAATCGTT-AAAGACCCTAAAG-TGTTGCTACTTGATGAAGCCACA 3909
Query 3490 AGTGCAT-TGGACGCAGAATCTGAGCGTGTGGTTCAGGATGCGCTTG-ATCGAGTTATGG 3547
||||| | | ||||| || || |||||||||||||||||||| ||| | || |||||||
Sbjct 3910 AGTGC-TCTAGACGCTGAGTCAGAGCGTGTGGTTCAGGATGCA-TTGGACCGGGTTATGG 3967
Query 3548 TGAATCGAACCACTGTAGTTGTGGCTCATCGGCTCA-CGACGATTAAGAATGCAGACGTG 3606
| || |||||||| || || ||||| |||||| | | | || || ||||| || || ||
Sbjct 3968 TTAACCGAACCACCGTGGTGGTGGCACATCGGTT-ATCAACAATCAAGAACGCCGATGTA 4026
Query 3607 ATTGCGGTTGTGAAAAACGGCGTTATTGCGGAAAAAGGAAGGCATGAGACACTGATGAAG 3666
||||| || || || || || || || | ||| || |||| ||||||||| |||| ||
Sbjct 4027 ATTGCAGTGGTTAAGAATGGAGTCATCGTGGAGAAGGGAAAGCATGAGACTTTGATTAAT 4086
Query 3667 ATTTCAGGTGGCGCTTATGCATCT 3690
|| || ||| | |||||| |||
Sbjct 4087 ATCAAAGATGGTGTTTATGCTTCT 4110
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 185266520499
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5