BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493131
Length=1030
Score E
Sequences producing significant alignments: (Bits) Value
AT4G17470.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1293 0.0
AT4G17480.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 568 5e-161
AT4G17483.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 311 9e-84
> AT4G17470.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr4:9742759-9744860 REVERSE LENGTH=1181
Length=1181
Score = 1293 bits (700), Expect = 0.0
Identities = 938/1045 (90%), Gaps = 47/1045 (4%)
Strand=Plus/Plus
Query 1 CTCCATGGAGAAGAGTTTCCAACGATCTGCTCTCCTTGTGACTTTGtctctcttcttctt 60
|||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||
Sbjct 88 CTCCATGGAGAAGAGTTTCCAAAGGTCTGCTCTCCTTGTGACTTTG--TCTC-TCTTCTT 144
Query 61 cttctccattccggtttcactctctgttccattcgttctgtttcATGGGTTTGGTGGTGA 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 145 CTTCTCCATTCCGGTTTCACTCTCTGTTCCATTCGTTCTGTTTCACGGGTTTGGAGGTGA 204
Query 121 ATGCTCAAATAATAAAGTTAGCAACTTAACACAGTTCCTTATCAACCACTCCGGCTACCC 180
|||||| ||| | ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 205 ATGCTCCAATGACAAAGTGAGCAACTTAACACAGTTCCTCATCAACCACTCCGGCTACCC 264
Query 181 TGGAACTTGCGTAGAAATAGGAAATGGAGTGCAAGATTCCTTGTTCATGCCGCTTAGGCA 240
|||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||
Sbjct 265 TGGAACTTGCGTAGAAATAGGAGATGGAGTGAAAGATTCCTTATTCATGCCGCTTAGGCA 324
Query 241 ACAAGCGAGTATAGCTTGTGAGAAAATTAAACAGATG-AAGGAGCTGAGTGAAGGTTACA 299
|||||| || ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 325 ACAAGCCAGCATAGCTTGTGAGAAAATTAAACAGATGCCA-GAGCTGAGTGAAGGTTACA 383
Query 300 ACATTGTTGCAGAGTCTCAAGGAAACTTAGTCGCTAGAGGACTAATCGAGTTTTGCGACA 359
|||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 384 ACATAGTGGCAGAGTCTCAAGGAAACTTGGTCGCTAGAGGCCTAATCGAGTTTTGCGATA 443
Query 360 ATGCTCCACCAGTCATCAACTATGTCTCCTTAGGAGGACCTCATGCTGGCGTCGCTGCAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 ATGCTCCACCAGTCATCAACTATGTCTCCTTAGGAGGACCTCATGCTGGCGTCGCTGCAA 503
Query 420 TCCCCAAGGGGTGT-ACCTCTCCATTTTGTATGCTCCTGAAGGCAGTGTTT-GCAGTGAT 477
||||| |||||||| | || ||||||| || ||| ||||||| || ||| ||||||||
Sbjct 504 TCCCCGAGGGGTGTGAT-TCAGCATTTTGCATACTCATGAAGGC-GTTTTTTGCAGTGAT 561
Query 478 CTACACCGACCTCGCTCAAGACCATACTGCTCCAAGTGGTTATGTCAAAAAACCTATGGA 537
|||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 562 TTACAGCGATTTTGCTCAAGATCATACTGCTCCAAGTGGTTATGTCAAAAAACCTATGGA 621
Query 538 AATAGCAAATTATCTGGAACACTCCAAGTATCTGCCAAAGCTAAACAACGAGAGACCTGG 597
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 622 AATAAAAAATTATTTGGAACACTCCAAGTATCTGCCAAAGCTAAACAACGAGAGACCTGG 681
Query 598 --A------C-C-ACTTTTAAAGACCGTTTCACCAGCTTGCAAAACTTGGTTCTCATCAT 647
| | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 682 CGAGAAAAACTCCACTTTTAAAGACCGTTTCACCAGCTTGCAAAACTTGGTTCTCATCAT 741
Query 648 GTTC-AGAAATGATACAATATTGGTTCCAAGAGAAACTTCTTGGTTCGGATATTACCCGG 706
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 742 GTTCCAGAA-TGATACAATATTGGTTCCAAGAGAAACTTCTTGGTTCGGATATTACCCGG 800
Query 707 GTGGAGCTTCATCTTCAACACCTGTTTTGCCTCCTTAAAAGGTCAACCAGGCAGAAATCA 766
|||||||||||||||||||||||||||||||||| ||||| ||| || | | |
Sbjct 801 ATGGAGCTTCATCTTCAACACCTGTTTTGCCTCCTCAAAAGA-CAA--AG-C-----T-A 850
Query 767 TCTACAAAGCTCTATACTGAGGATTGGATTGGTCTGAAAACCTTGGATGATGCTGGAAAA 826
| ||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 T--ACA---CT-------GAGGATTGGATTGGTCTGAAAACCTTGGATGATGCTGGAAAA 898
Query 827 GTGAAGTTTATTAGTGTCCCTTGCGGACACATCGAGATAGCTGAAGAAGACCTTGTTAAA 886
|||| |||||||||||||||| ||||||||||||| ||| | |||||||||||||| |||
Sbjct 899 GTGAGGTTTATTAGTGTCCCTGGCGGACACATCGAAATAACGGAAGAAGACCTTGTCAAA 958
Query 887 TACGTTGTGCCTTACCTCCAGAACGAGTCTACGTTCACTTCTGAACACGA-AGCAATGTA 945
||||||||||||||||||||||| |||||| |||| ||||||||||||| | |||| ||
Sbjct 959 TACGTTGTGCCTTACCTCCAGAATGAGTCTTTGTTCTCTTCTGAACACGAGA-CAATATA 1017
Query 946 GACATTGCAATCGTGAACCCATTTAATAAAAAAGGCCTCATCCGAAAATAAGGTCCTATA 1005
|||||| ||||| | |||||||| |||||| |||||| |||||| ||||| ||||||
Sbjct 1018 GACATTACAATCTTTAACCCATT-AATAAATT-GGCCTCGTCCGAATCTAAGGGCCTATA 1075
Query 1006 TCATCAATGTAACATCATCATCTAT 1030
|||||||||||||||||||||||||
Sbjct 1076 TCATCAATGTAACATCATCATCTAT 1100
> AT4G17480.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr4:9745006-9746966 REVERSE LENGTH=1341
Length=1341
Score = 568 bits (307), Expect = 5e-161
Identities = 743/941 (79%), Gaps = 80/941 (9%)
Strand=Plus/Plus
Query 2 TCCATGGAGAAGAGTTTCCA-ACGATCTGCTCTCCTTGTGACTTTGtctctcttcttctt 60
|||||||||||||||||||| | ||| |||||||||||||| ||| ||| |||||||
Sbjct 117 TCCATGGAGAAGAGTTTCCAGA-AATCAGCTCTCCTTGTGACCTTG--ACTC-TCTTCTT 172
Query 61 cttctccattccggtttcactctctgttccattcgttctgtttcATGGGTTTGGTGGTGA 120
| | | |||||| |||||| |||| ||||||||| |||||||||||||| || | | | |
Sbjct 173 C-T-T-CATTCCAGTTTCAATCTCGGTTCCATTCATTCTGTTTCATGGGATTAGAGATCA 229
Query 121 ATGCTCAAATAATAAAGTTAGCAACTTAACACAGTTCCTTATCAACCACTCCGGCTACCC 180
|||||| ||| | ||| |||| ||| |||| |||||| ||||| ||| ||| |||
Sbjct 230 ATGCTCCAATGGTGGAGTGAGCAGCTTCGTACAGCTCCTTAGCAACCTCTCTAGCT-CCC 288
Query 181 -TGGAACTTGCGTAGAAATAGGAAATGGAGTGCAAGATTCCTTGTTC-ATGCCGCTTAGG 238
|||| ||||| |||||||||||||||||| ||||||||| || | |||||||||| |
Sbjct 289 ATGGATCTTGCTTAGAAATAGGAAATGGAGAGCAAGATTCGGTG-ACTATGCCGCTTACG 347
Query 239 CAACAAGCGAGTATAGCTTGTGAGAAAATTAAACAGATGAAGGAGCTGAGTGAAGGTTAC 298
|||||||||||| |||| ||||||||| |||||||||||||||| ||||| |||| |||
Sbjct 348 CAACAAGCGAGTGTAGCGTGTGAGAAAGTTAAACAGATGAAGGATTTGAGTCAAGGCTAC 407
Query 299 AACATTGTTGCAGAGTCTCAAGGAAACTTAGTCGCTAGAGGACTAATCGAGTTTTGCGAC 358
|||||||||||| |||||||||||||||| || |||||||| |||||||||||||| |||
Sbjct 408 AACATTGTTGCACAGTCTCAAGGAAACTTGGTAGCTAGAGGTCTAATCGAGTTTTGTGAC 467
Query 359 AATGCTCCACCAGTCATCAACTATGTCTCCTTAGGAGGACCTCATGCTGGCGTCGCTGCA 418
|||||||| || ||| |||||||| | || |||||||| |||||||||||| | | | |
Sbjct 468 AATGCTCCTCCGGTCTTCAACTATATATCTTTAGGAGGTCCTCATGCTGGCATATCCG-A 526
Query 419 -ATCCCCAAGGGGTGTACCTCTCCATTTTG-TATGCTCCTGAAGGCAGTGTTTGCAGTGA 476
|| ||||| ||||| ||| || |||| | | | ||||| || || | |
Sbjct 527 CATTCCCAA---GTGTAATTCTACACTTTGCGA-GTTGCTGAAAACA------GC-G-G- 573
Query 477 TCTACACCGACCTCGCT-CAAGACCATACTGCTCCAAGTGGTTATGTCAAAAAACCTATG 535
||||||||||| ||| | ||||| |||| |||||||||||||||| |||| | ||||
Sbjct 574 TCTACACCGACTTCG-TACAAGATCATATTGCTCCAAGTGGTTATATCAAGATTCCTACA 632
Query 536 GAAATAGCAA-ATTATCTGGAACACTCCAAGTATCTGCCAAAGCTAAACAACGAGAGACC 594
|| ||| || |||| ||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 633 GATATA-AAAGATTACCTGGAACACTCCAAGTATCTGCCAAAGATCAACAACGAGAGACC 691
Query 595 T-------GG---ACCACTTTTAAAGACCGTTTCACCAGCTTGCAAAACTTGGTTCTCAT 644
| || ||||||||||||||||| ||||| |||||||| |||||||| || |
Sbjct 692 TAACGAAAGGAACACCACTTTTAAAGACCGGTTCACTAGCTTGCACAACTTGGTCCTTGT 751
Query 645 CATG-TTCAGAAATGATACAATATTGGTTCC-AAGAGAAACTTCTTGGTTCGGATATTAC 702
|||| || || |||| || || || |||| || ||||| |||||||||||||||||||
Sbjct 752 CATGTTTGAG-GGTGATGCAGTAGTGATTCCTAA-AGAAAGTTCTTGGTTCGGATATTAC 809
Query 703 CCGGGTGGAGCTTCATCTTCAACACCTGTTTTGCCTCCTTAAAAGGTCAACCAGGCAGAA 762
|||| |||||| | || | |||||| ||||| |||| || | | |||
Sbjct 810 CCGGATGGAGC-T--TC--C-ACACCTCTTTTGTCTCC--------TC-A--A--CAG-- 848
Query 763 ATCATCTACAAAGCTCTATACTGAGGATTGGATTGGTCTGAAAACCTTGGATGATGCTGG 822
|||||||||||||||||||||||||||||||||||||| ||||||| ||| |
Sbjct 849 -------ACAAAGCTCTATACTGAGGATTGGATTGGTCTGAAAACATTGGATGCTGCCAG 901
Query 823 AAAAGTGAAGTTTATTAGTGTCCCTTGCG-GACACATCGAGA-TAGCTG-AAGAAGACCT 879
|||||| |||||| | ||||||||| ||| | ||| | ||| |||| | |||| ||| |
Sbjct 902 AAAAGTTAAGTTTGTCAGTGTCCCTGGCGAG-CACCTA-AGAATAGC-GCAAGACGACGT 958
Query 880 TGTTAAATACGTTGTGCCTTACCTCCAGAACGAGTCTACGT 920
||| ||| |||| |||||||||||| ||||| || || |||
Sbjct 959 TGTAAAACACGTCGTGCCTTACCTCAAGAACCAGCCTGCGT 999
> AT4G17483.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr4:9747344-9748892 REVERSE LENGTH=934
Length=934
Score = 311 bits (168), Expect = 9e-84
Identities = 503/660 (76%), Gaps = 42/660 (6%)
Strand=Plus/Plus
Query 68 attccggtttcactctctgttccattcgttctgtttcATGGGTTTGGTGGTGAATGCTCA 127
|||||||||||| ||||| |||| ||| | || ||||| || |||| | | |||| ||
Sbjct 67 ATTCCGGTTTCAATCTCTATTCCCTTCATACTCTTTCACGGAATTGGAGATAAATGTTC- 125
Query 128 AATAATAAAGTTAGCAACTTAACACAGTTCCTTATCAACCACTCCGGCTAC-CCTGG-AA 185
| | |||||| ||||| || || |||| | ||||| ||| |||| | ||||| |
Sbjct 126 --TGGTGGAGTTAGTAACTTCACGCAACTCCTAACCAACCTCTCTGGCT-CTCCTGGCTA 182
Query 186 CTTGCGTAGAAATAGGAAATGGAGTGCAA-GATTCCTTGTTCATGCCGCTTAGGCAA-CA 243
|||| |||||||||||||||||| || || || | ||||||||| | || | || ||
Sbjct 183 -TTGCTTAGAAATAGGAAATGGAG-AAAAGGACTCATGGTTCATGCCAC-TAAGAAAGCA 239
Query 244 AGCGAGTATAGCTTGTGAGAAAATTAAA-CAGATGAAGGAGCTGAGTGAAGGTTACAACA 302
| | ||| |||| ||||||||| | ||| | |||||| | | | ||| ||||||||||||
Sbjct 240 AACAAGTGTAGCGTGTGAGAAAGTGAAAGC-GATGAAAGTGTTAAGTCAAGGTTACAACA 298
Query 303 TTGTTGCAGAGTCTCAAGGAAACTTAGTCGCTAGAGGACTAATCGAGTTTTGCGACAATG 362
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct 299 TTGTTGCAGAGTCTCAAGGAAACTTAGTTGCTAGAGGACTAATCGAGTTCTGCGATAATG 358
Query 363 CTCCACCAGTCATCAACTATGTCTCCTTAGGAGGACCTCATGCTGGCGTCGCTGCAATCC 422
|||| || || || |||||| |||| |||||||| |||||||||||| | || |||||
Sbjct 359 CTCCTCCTGTTATAAACTATATCTCTTTAGGAGGTCCTCATGCTGGCATTGCCAAAATCC 418
Query 423 CCAAGGGGTGTACCTCT--CC-ATTTTGTATGCTCC-TGAAGGCAGTGTTTGCAGT--GA 476
| ||| |||| ||| || | | ||| | | ||||| | |||| | ||| ||
Sbjct 419 CTAAG---TGTAATTCTGGCCCAATATGTGCGATAGGTGAAG-CTTTGTT-GAAGTTAGA 473
Query 477 --TCTACACCGACCTCGCTCAAGACCATACTGCTCCAAGTGGTTATGTCAAAAAACCTA- 533
|||| || ||| ||| |||||| |||| |||||| ||||||||| |||| | |||
Sbjct 474 GGTCTATACTGACTTCGTTCAAGATCATATTGCTCCTAGTGGTTATATCAAGATTCCTGG 533
Query 534 TGGAAATAGCAAATTATCTGGAACACTCCAAGTATCTGCCAAAGCTAAACAACGAGAGAC 593
|| |||| |||| ||| |||| |||||||||||||| |||||||| ||||| |||||||
Sbjct 534 TG-AAATTTCAAAGTATTTGGAGCACTCCAAGTATCTACCAAAGCTTAACAATGAGAGAC 592
Query 594 CTG--GA------C-C-ACTTTTAAAGACCGTTTCACCAGCTTGCAAAACTTGGTTCTCA 643
||| || | | ||||| |||||||| ||||| | ||| || || || |||||
Sbjct 593 CTGACGAAAGAAACTCTACTTTCAAAGACCGATTCACTAACTTACACAATTTAGTTCTTG 652
Query 644 TCATGTTC-AGAAATGATACAATATTGGTTCC-AAGAGAAACTTCTTGGTTCGGATATTA 701
|||||||| ||| |||||||| || | || || ||||||| | ||||| || |||||
Sbjct 653 TCATGTTCGAGAGC-GATACAATGTTAATCCCTAA-AGAAACTGCATGGTTTGGTTATTA 710
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50485317735
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5