BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493134 Length=1020 Score E Sequences producing significant alignments: (Bits) Value AT4G17440.1 | Symbols: | Protein of unknown function (DUF1639)... 1443 0.0 > AT4G17440.1 | Symbols: | Protein of unknown function (DUF1639) | chr4:9727740-9729263 FORWARD LENGTH=1061 Length=1061 Score = 1443 bits (781), Expect = 0.0 Identities = 901/959 (94%), Gaps = 8/959 (1%) Strand=Plus/Plus Query 35 tctctctctcctctctGCTTTTTGCTTTCTAGGGTTTTTGATCATCTCTCAGGTGAATAG 94 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 27 TCTCTCTCTCCTCTCTGCTTTTTACCTTCTAGGGTTTTTGATCATCTCTCAGGTGAATAC 86 Query 95 GTTTCGGTATAATCTCATCCCAATGTCTGCTAATTCCAAGTCGGAGAGGTCTGCTTCTCA 154 |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 87 GTTTTGGTATAATCTCATACCAATGTCTGCGAATTCCAAGTCGGAGAGGTCTGCTTCTCA 146 Query 155 ATCGGCGGAGACGGTGGCTGTTTCTAACCGTGTCGTGGCGTCACGGTCAAGTCGTCAGCC 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 147 ATCGGCGGAGACGGTGGCTGTTTCTAACCGTGTCGTGGCGTCACGGTCAAGTCGTCAGCC 206 Query 215 GCGGCTCTCTTTCTCCTCCTTTGCTCCGTCATCAGAGCACGATTACTTGAAGAAGCTGAA 274 ||| ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| Sbjct 207 GCGTCTCTCTTTCTCCTCCTTTGCTCCCTCATCAGAGCACGATAACCTGAAGAAGCTGAA 266 Query 275 ATCCGATGAGATTTCTCC-GACgagagaggaagttccagtgtcggtgaaggagagagaag 333 |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||| Sbjct 267 ATCCGATGAGATTTCTCCCG-CGAGAGAGGAAGTGCCGGTGTCGGTGAAGGAGAGAGAAG 325 Query 334 aaacggaggaggaggaagcgaagaggacttggaatctaaggccgaggaaggCTTTTGGTG 393 |||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||| Sbjct 326 AAACGGAGGAGGAGGAAGCGAAGAGGACGTGGAATCTTCGTCCGAGGAAGGCTTATGGTG 385 Query 394 GTTTGAAGAAAGGAAACGGCGTATTCGCGACGGAGGTGTGCGGTGGCGGAGGAGGAGGAG 453 ||| |||||||||||||||||| ||| || ||||||| ||||||||||| |||||||||| Sbjct 386 GTTCGAAGAAAGGAAACGGCGTGTTCACGGCGGAGGTTTGCGGTGGCGGCGGAGGAGGAG 445 Query 454 TAGGTTCGGAGGTGAAGAATCAGAAATCAAGCGGAGGAATAGAGCCGAAATCGAACAGGC 513 | ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| Sbjct 446 --G-TTCGGAGGTGAAGAATCAGAAATCAGGCGCAGGAATTGAGCCGAAATCGAACAGGC 502 Query 514 AGAGAGGAATACCGGCGGAATCTCCTGGATTAGGCGGTGGTGAGGTTGCGAACGAGAATC 573 |||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct 503 AGAGAGGAATCCCGGCGGAATCACCCGGATTAGGCGGTGGTGAGGTTGCAAACGAGAATC 562 Query 574 GCAGGCTTTGGGTTGCTCTTTCTCGAGACGAGATCGAAGAAGATTTGTTTAGCATGAGTG 633 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct 563 ATAGGCTTTGGGTTGCTCTAGCTCGAGACGAGATCGAAGAAGATTTGTTCAGCATGAGTG 622 Query 634 GGAACAGGCCATCTCGCCGGCCAAGAAAGAGGGCAAAAGCTTTGCAGAAATATCTCGATG 693 |||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||| Sbjct 623 GGAACAGGTCATCTCGCCGGCCAAGGAAGAGGGCAAAAGCTATGCAGAAACATCTCGATG 682 Query 694 TCATTTTCCCTGGATTGTGTCTCGTTGGGATGAATGCTGATTGCTTCAGAGTATCCACTT 753 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 683 TCATTTTCCCTGGATTGGGTCTCGTTGGGATGAATGCTGATTGCTTCAGAGTAGCCACTT 742 Query 754 CTCCGGCTAAGTGATGATCGATGCAAAGGAGTCTTTTGGTGAAGGAAAAAGATAGGTATG 813 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 743 CTCCGGCTAAGTGATGATCGATGCAAAGGAGTCTTTTGGTGAAGGAAAAAGATAGGTATG 802 Query 814 CTGGTGATCAAGAATCCAGATACACCACAGTAGAAGATAGGAAGGAGATATATCAAGAGA 873 ||||||||| |||||||||||||| ||||||||||| ||||||| |||||| |||||||| Sbjct 803 CTGGTGATCGAGAATCCAGATACATCACAGTAGAAGCTAGGAAGAAGATATCTCAAGAGA 862 Query 874 CATGTTCTTGTCTCATATCAAACTTAGTAGTAACTAAATTATAAGTAAATATCGGTAAGT 933 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 863 CATGTTCTTGTCTCATATCAAACTTAGTAGTAACTAAACTATAAGTAAATATCGGTAAGG 922 Query 934 TCATATAATTATAGATATATA-AA-GAAAAGAGAGCCAGAGGGGTTTGTTTTTGAGTTA 990 ||||||||||||||||||||| || || | |||||| |||||||||||||||||||||| Sbjct 923 TCATATAATTATAGATATATATAAAGAGA-GAGAGCGAGAGGGGTTTGTTTTTGAGTTA 980 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49982976265 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5