BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493150
Length=2283
Score E
Sequences producing significant alignments: (Bits) Value
AT4G17250.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 3570 0.0
AT5G47580.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1099 0.0
> AT4G17250.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G47580.1);
Has 31 Blast hits to 31 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:9671051-9673417
FORWARD LENGTH=2367
Length=2367
Score = 3570 bits (1933), Expect = 0.0
Identities = 2172/2289 (95%), Gaps = 9/2289 (0%)
Strand=Plus/Plus
Query 1 GAGACAAATCTAGTGATGGGTTGCGACTCCCATGGCAATCTAAGCGACACAGAGTTCAGC 60
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 39 GAGACAAATCTAGTGATGGGTTGCGACTCACATGGAAATCTAAGCGACACAGAGTTCAGC 98
Query 61 AAGCCGTTGCCATCGATAGGTGTATACGTTGCTGCAGCTTCAGTGATCTGTGGAGTTGCC 120
|||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||
Sbjct 99 AAGCCGTTGCCATCCATAGGTGTATATGTCGCTGCAGCTTCACTGATCTGTGGAGTTGCT 158
Query 121 ATGTTTTCCGATCTTCTTCACGGCTTCCGGCACCGTAAGTTCTGGTTCCCTTGCAAATTC 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 159 ATGTTTTCCGATCTTCTTCACGGCTTCCGGCACCGTAAGTTCTGGTTTCCTTGCAAATTC 218
Query 181 TTCTCTCTCAACGCTACCACTCTCACCTTTATCTCTGTCTGCGTCAAACTCTCCTTGGAT 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 219 TTCTCTCTCAACGCTACCACTCTCACCTTTATCTCTGTATGCGTCAAACTCTCATTGGAT 278
Query 241 CTCAACACTTCTATGCCTAGTCGCCAAGATCAGCTTGCTAAACTCAGTAGCAGCGTCTTC 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 279 CTCAACACTTCTATGCCTAGTCGCCAAGATCAGCTTGCTAAACTCAGCAGCAGCGTCTTC 338
Query 301 GTCTGCACTGTGATGGCTAATTCCATGCCTTCTCTTGGTTTCATGGTCACACAAGATCTC 360
|| ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 339 GTATGCACCGTGATGGCTAATTCCATGCCTTCTCTTGGTTACATGGTCACGCAAGATCTC 398
Query 361 CTCATGAACCTCGTGGCTCTTGGGATTCTAGTTATCACTGATGTTGTTAATATCTGTATC 420
|||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct 399 CTCATGAACCTCACGGCTCTTGGGATTCTAGTCATCACCGATGTTGTTAACATCTGTATC 458
Query 421 CAATTGGGCACAGGAGCTATATATGTTTTTACTCAAGAACACGCTCTCGTCATTGTTCTG 480
|||||||| ||||||||||||||||| || |||||||||||||||| |||||| ||||
Sbjct 459 CAATTGGGTACAGGAGCTATATATGTGTTCCCTCAAGAACACGCTCTGGTCATTATTCTC 518
Query 481 ATGTTTTTGATGTTTATGATCTTGAGTTTCTCTGCTATCACAGTCCCGGCCACAAAGCGT 540
||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 519 ATGCTTTTGATGTTTATGATCTTGAGTTTCTCTGCTATCACTGTCCCAGCCACAAAGCGT 578
Query 541 TTCTTAGAGCTTAAGTACAAGAAGAGATACGAGTTCGCTTTGAAGCAGTGTCCTTCGTAT 600
||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 579 TTCTTGGAGCTCAAGTACAAGAAGAGATACGAGTTTGCTTTGAAGCAGTGTCCTTCGTAT 638
Query 601 ACAGAGAGAAGGAGAGGGGTTCCTAAGCTTAAAGAAGATCTGATGAAATTCTGGATGATG 660
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 639 ACAGAGAGAAGAAGAGGGGTTCCTAAGCTTAAAGAAGATCTGATGAAATTCTGGATGATG 698
Query 661 GCTCACACTTCTAGCCCTCAGTTTGTGATGGCTCGCTCTGTTACTTGCACCACCTCTGGT 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 699 GCTCACACTTCTAGCCCTCAGTTTGTGATGGCTCGCTCTGTTACTTGCACCACCACTGGT 758
Query 721 TTCCTCTGTTTCTTGAGCGCAATTACATTGGCTGAAGCCATGGTCCGTTCTTACTTTCTT 780
|||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 759 TTCCTCTGTTTCTTGATTGCAATCACATTGGCTGAAGCCATGGTCCGGTCTTACTTTCTT 818
Query 781 CAAACTCGGTCACTTGGGTTCTGCAATGGAGATTCTGATTACAAATGGTCAACCACTTTG 840
||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 CAACCCCGGTCACTAGGGTTCTGCAATGGAGATTCTGATTACAAATGGTCAACCACTTTG 878
Query 841 GTTCTAGTCTCCCAAACAGCTGCAGTAGCCATAGGAACCGTTGCTCCAGCGAGCAGATGG 900
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 879 GTTCTAGTCTCCCAGACAGCTGCAGTGGCCATAGGAACCGTTGCTCCAGCGAGCAGATGG 938
Query 901 TTGAAAGCAGTGAACTTGAGGTGTCCATTTAGAA-CAAAGAAATCTTTGAAAGATGAGTT 959
| || ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||
Sbjct 939 CTCAAGGCAGTGAACTTTAGGTGTCCATTTAGAAACAA-GAAATCTTTGAAAGATGAGTT 997
Query 960 GAGAGTAGAGAGTTATTGGGTAGAGTGTCTCGCTGAGAAGAAAGAACGTCCTTTGAACTT 1019
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 998 AAGAGTAGAGAGTTATTGGGTAGAGTGTCTCGCTGAGAAGAAAGAACGTCCCTTGAACTT 1057
Query 1020 TTGGATGCTCCATGGTCGCCGCAGCAGGAAGCTTGCACACGACGTAAACCGGTTGATGCT 1079
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1058 TTGGATGCTCCATGGTCGCTGCAGCAGGAAGCTTGCACACGACTTAAACCGGTTGATGCT 1117
Query 1080 TGATATCTGCATTGCAACACAGTATGGTATAGTTCTGGCTAGCAAGTTTCTCCGTTTCAT 1139
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1118 TGATATCTGCATTGCAACACAGTATGGTATAGTGCTGGCTAGCAAGTTTCTCCGTTTCAT 1177
Query 1140 CACGGTCTATTGTTTGAGTAGAATCTTGCTATGTTGTTTTTATTTCACCTACAAAAGTGA 1199
|||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 1178 CACGGTCTATTGTTCGAGTAGAATCTTGCTATGTTGTTTTCATTTCACCTTCAAAAGTGA 1237
Query 1200 TTCTGTTGCAAACGCTGAGTCCTCGGGTTCAAATCCATCAACGATACAATTTGTTCTGCA 1259
|||||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||
Sbjct 1238 TTCTGTTGCAAACGCTGAGTCCTCCGGTTCAAATCCATCAACCAGACAATTCGTTCTGCA 1297
Query 1260 TCTTGAAGGAGAGGAGGAGATGGTGGACTACATGGCACGGAGCAACCGTGTGGCCACAGA 1319
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1298 TCTTGAAGGAGAGGAGGAGATGGTGGACTACATGGCACGTAGCAACCGTGTGGCCACAGA 1357
Query 1320 CCACTTGATACAAAAAGGTCGGAAGAAACAACCCGTAAACTTGATAGAGCTCTTGGAGGC 1379
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1358 CCACTTGATACAAAAGGGTCGGAAGAAACAACCTGTAAACTTGATAGAGCTCTTGGAGGC 1417
Query 1380 AACAACTCCCATCTCAAAAGGATTTGAAGGGATCCGAGACTTTGACAGCGACGAGGTCGC 1439
||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct 1418 AACAACTTTCATCTCAAAAGGATTTGAAGGGATTCGAGATTTTGACAGCGACGAGGTTTC 1477
Query 1440 TTCTCTGGCCTCTGGAGAGCCACCTAATAGTTGGGCCCTTCCACTGGTAACACTGACGAG 1499
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1478 TTCTCTGGCCTCTGGAGAGCCACCTAATAGTTGGGCCCTTCCATTGGTAACACTGACGAG 1537
Query 1500 CATCGCTGTCGCTCTTCCTAACATCAAGCCTTACTCACTGAAGAAGTTAGTGAAAGCTGT 1559
||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct 1538 TATCGCTGTCGCTCTTCCTAACATCAAGCCTTGCTCGCTCAAGAAGTTAGTGAAAGCTGT 1597
Query 1560 AAACGAGGCATTGGTCTATGTCAACAAGTTCGAAGACGTCTTAGACATCGGAGGAGAGTT 1619
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1598 AAACGAGGCATTGGTCTATGTCAACAAGTTCGAAGAGGTCTTAGACATCGAAGGAGAGTT 1657
Query 1620 AGCTAATAGCAGGAAAGCTGCAGAAGTAGTTTGGTTAGGAGTTGATCTCTACCATAAATG 1679
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1658 AGCTAACAGCAGGAAAGCTGCAGAAGTTGTTTGGTTAGGAGTTGATCTCTACCATAAATG 1717
Query 1680 GCTCAACGTGGATCTTCGAAAACTATCCAAGAAACAAAGCAAAACACCACAAGAAGTTCT 1739
||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||
Sbjct 1718 GCTCAACGTGGATCTTCGAAAACTATCCAAGCAACATAGCAAAACACCACAGGAAGTTCT 1777
Query 1740 TAAAGAGCTGGTAGATATAGCA-AAGAAAGAGTTTACAGAGTCATGGGAGAAAAACCGTA 1798
|||||||||||||||||||||| || ||||||||||||||||||||||||||||| || |
Sbjct 1778 TAAAGAGCTGGTAGATATAGCACAA-AAAGAGTTTACAGAGTCATGGGAGAAAAATCGGA 1836
Query 1799 TACTATGCATGAAACATAAGCCCTCTCAATGGCCCATCAAGACTCAAGCAGCAAACTCAA 1858
||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1837 TACTATGCATGAAGCATAAGCCCTCGCACTGGCCCATCAAGACTCAAGCAGCAAACTCAA 1896
Query 1859 TGTACCGAATCAGCCAAACTCTTTTGATGAAGTACGAATCAAGAAACATTGAAACAGAGG 1918
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1897 TGTACCGAATCAGCCAAACCCTTTTGATGAAGTACGAATCAAGAAACATTGAAACAGAGG 1956
Query 1919 AGACTCTGTTGAAAGATGTGGAGAGGATGGTATCGGACATAGTATCAGGATGCTTTTGCA 1978
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1957 AGACTCTGTTGAAAGATGTGGAAAAGATGGTATCGGACATAGTATCAGGATGCTTTTGCA 2016
Query 1979 ACACGGCACAGGTAATAGGAATGAAGTGTTTGGTGACAGCAGTGGAAGTGAGAGAAGCTT 2038
|||||||||| || || ||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct 2017 ACACGGCACAAGTTATTGGAATGAAGTGTTTGGTTACAGCAGTGGAAGTGAGGGAAGCGT 2076
Query 2039 CCGTGAGAGAAGCGGCAATGCATTTGGGGAGAACAGAGAAGATACTTGAGATCGTGGACA 2098
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2077 CGGTGAGAGAAGCGGCAATGCATTTGGGGAGAACAGAGAAGATACTTGAGATCGTAGACA 2136
Query 2099 GAAGATGCATGCCTGCCTTGTCTCATCACAAAGTGGCTAAGATTGATGAATGGAGAGAGT 2158
| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2137 GGAGATGCATGCCTGCTTTGTCTCATCACAAAGTGGCAAAGATTGATGAATGGAGAGAGT 2196
Query 2159 TTTATAGGACCAATAAATCCATCTCTTTCACTCATCCTTCGTCTCAGTGTACCACCCGTG 2218
||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||
Sbjct 2197 TTTATAGGACCAATAAATCCATCACTTTCACTCATCCTTCGTCCCAGTGTACGACCCGTG 2256
Query 2219 AACTCATTCTAAATCTAGAATAACACATT--CT-GACA-AGTTTAAAGAATTAATTACTT 2274
|||||||| | || ||||||||||||||| || | || | ||||||||||||||||| |
Sbjct 2257 AACTCATTATCAACCTAGAATAACACATTTTCTTGTCACA-TTTAAAGAATTAATTACGT 2315
Query 2275 TTTGTACAT 2283
|||||||||
Sbjct 2316 TTTGTACAT 2324
> AT5G47580.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G17250.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
| chr5:19294846-19297418 REVERSE LENGTH=2573
Length=2573
Score = 1099 bits (595), Expect = 0.0
Identities = 1656/2153 (77%), Gaps = 133/2153 (6%)
Strand=Plus/Plus
Query 22 TGCGACTCCCATGGCAATCT-AAGCGACACAGAGTTCAGCAAGCCGTTGCCATCGATAGG 80
|||||| |||||||| || | || ||| ||||||||||||| || || || ||||| ||
Sbjct 240 TGCGACGCCCATGGCGATTTGAA-CGATGCAGAGTTCAGCAAACCCTTACCTTCGATTGG 298
Query 81 TGTATACGTTGCTGCAGCTTCAGTGATCTGTGGAGTTGCCATGTTTTCCGATCTTCTTCA 140
| | |||||||| | ||||||| | |||||||| | |||||| |||||||| | ||
Sbjct 299 TATCTACGTTGCCGTAGCTTCACTCATCTGTGGTCTAGCCATGGCCGCCGATCTTATACA 358
Query 141 CGGCTTCCGGCACCGTAAGTTCTGG-TTCCCTTGCAAATTCTTCTCTCTCAACGCTACCA 199
||||||||| ||||| || |||||| ||||| || || ||||||||||||||||| ||
Sbjct 359 CGGCTTCCGACACCGCAAATTCTGGTTTCCC-TGTAAGTTCTTCTCTCTCAACGCCACTT 417
Query 200 CTCTCACCTTT-ATCTCTGTCTGCGTCAAACTCTCCT-TGGATCTCAACACTTCTATGCC 257
|||| | |||| ||| ||||| | ||||||||| || |||||||||||||||| |||||
Sbjct 418 CTCTGA-CTTTCATCGCTGTCGGAATCAAACTCT-CTGTGGATCTCAACACTTCCATGCC 475
Query 258 TAGTCGCCAAGATCAGCTT-GCTAAACTCAGTAGCAGCGTCTTCGTCTGCACTGTGATGG 316
||||| || |||||| || ||||||||||| |||| |||||| || || ||||||||||
Sbjct 476 GAGTCGTCAGGATCAG-TTAGCTAAACTCAGCAGCACCGTCTTTGTATGTACTGTGATGG 534
Query 317 CTAATTCCATGCCTTCTCTTGGT-TTCATGGTCACACAA-GATCTCCTCATGAACCTCGT 374
|||||| ||||||||||| ||| || |||| || |||| |||||||||||||| || |
Sbjct 535 GTAATTCGATGCCTTCTCTGGGTATT-ATGGACA-ACAATGATCTCCTCATGAATCTTAT 592
Query 375 GGCTCTT-GGGATTCTAGTTATCACTGATGTTGTTAATATCTGTATCCAATTGGGCACAG 433
|||| || |||||||| || ||||||||||||||||| |||||||| || ||||| || |
Sbjct 593 GGCT-TTAGGGATTCTTGTCATCACTGATGTTGTTAACATCTGTATTCAGTTGGGTACTG 651
Query 434 GAGCTATATATGTTTT-TACTCAAGAACACGCTCTCGTCATTGTTCTGATG-TTTTTGAT 491
| || || |||||||| | || | ||||| ||| ||| | |||| ||| || || ||
Sbjct 652 GTGCGATTTATGTTTTCT-CTGAGGAACATTTTCTGGTCGTACTTCTCATGCTTCTT-AT 709
Query 492 GTTTATGATCTTGAGTTTCTCTGCTATCACAG-TCCCGGCCAC-AAAGCGTTTCTTAGAG 549
| ||||||||||| ||||||| || | ||||| |||| | || ||| | |||| |||
Sbjct 710 GCTTATGATCTTGTGTTTCTCGGCCACCACAGTTCCC-ACTACGAAA-AGAATCTTGGAG 767
Query 550 CTTAAGTACAAGAAGAGATACGA-GTTCGCTTTGAAGCAGTGTCCTTCGTATACAGAGAG 608
||||||||| ||||| ||||| ||| ||| || | ||||||||| | |||||||||
Sbjct 768 AGTAAGTACAATAAGAGGTACGACGTT-GCTATG-A--AGTGTCCTTTGGCTACAGAGAG 823
Query 609 AAGGAGAGGGGTTCCTAAGCTTAA---AG-AAGATCTGATGAAA-TTCTGGATGATGGCT 663
| | | ||| ||||| || || ||||| || | ||| || ||||||||||||
Sbjct 824 -A--ACA---GTTGCTAAG-AAAATTCAGCAAGATTTG-TCAAAGTTTTGGATGATGGCT 875
Query 664 CACACTTCTAGCCCTCAGTTTGTGATGGCTCGCTCTGTTACTTGCACCACCTCTGGTTTC 723
|| ||| ||||||||| || ||||||||||| ||||| || ||||| | |||||||||
Sbjct 876 CATACTAGTAGCCCTCAATTCGTGATGGCTCGTTCTGTCACGTGCACTGCTTCTGGTTTC 935
Query 724 CTCTGTTTCTTGAGCGCAATTAC-ATTGGCTGAAGCCATGGTCCGTTCTTACTTTCTTCA 782
||||| || |||| || ||||| |||| |||||| ||||| | ||||||| || |
Sbjct 936 TTCTGTCTCCTGAGTGCCATTACGCTTGG-TGAAGCTATGGTTAGGAGTTACTTT-TT-A 992
Query 783 A-A-CTCGGTCACTTGGGTTCTGCAATGGAGATTCTGATTACAAATGGTCAACCACTTTG 840
| | | ||||||||||||||||| |||||||||||||||||||||||||||| || ||
Sbjct 993 AGACCAAGGTCACTTGGGTTCTGCCATGGAGATTCTGATTACAAATGGTCAACTTCTCTG 1052
Query 841 GTTCTAGTCTCCCAAAC-AGCTGCAGTAGCCATAGGAACCGTTGCTCCAGCGAGCAGATG 899
||||| || | ||| || | || | ||||| ||||| ||| ||||||| |||| ||||||
Sbjct 1053 GTTCTTGTTTGCCAGACTA-CTACTGTAGCTATAGGGACCATTGCTCCTGCGATCAGATG 1111
Query 900 GTTGAAAGCAGTGAACTTGAGGTGTCC-ATTTAGAACAAAGAAATCTT-TGAAAGATGAG 957
||| | || |||||||| |||||||| ||| ||| |||||| | || | | |||||||
Sbjct 1112 GTTCACGGCTGTGAACTTCAGGTGTCCGATT-AGAGGAAAGAAGTATTAT-AGAGATGAG 1169
Query 958 TTGAGAGTAGAGAGTTATTGGGTAGAGTG-TCTCGCTGAGAAGAAAG-AACGTCCTTTGA 1015
|| ||| |||||||||| ||| | | || | || | |||||||| | ||| ||| || |
Sbjct 1170 TTTAGAATAGAGAGTTACTGGACACATTGGT-TCTCAGAGAAGAA-GCAACATCCCTT-A 1226
Query 1016 A-CTTTTGGATGCTCCATGGTCGCCGC-AGCAGGAAG-CTTGCACACGACGTAAACCGGT 1072
| | ||||||| ||| | | ||| | | ||||||| || |||||| | | ||| || |
Sbjct 1227 AGCCTTTGGATCCTCAAAGAACGCAGATA-CAGGAAGACT-GCACACAATGCAAAACGCT 1284
Query 1073 TGATGCTTG-ATATCTGCATTGCAACACAGTATG-GTATAGT-TCTGGCTAGCAAGTTTC 1129
||| ||| || | || |||| | |||||||| | || || | ||| |||||| ||
Sbjct 1285 GGATA-TTGGATGTATGTATTGTGATACAGTATGTG-ATTGTGTTTGG-TAGCAAAATTA 1341
Query 1130 TCCGTTTCATCACGGTCTATTGTTTGAGTA-GAATCTTGCTATGTTGTTTTTATTTCACC 1188
|||||| |||| |||| | ||| || ||| || ||||| | ||| | | | ||||| ||
Sbjct 1342 TCCGTTACATCTCGGTATCCTGTGTGGGTAAGA-TCTTG-T-TGT-GCTGTCATTTCGCC 1397
Query 1189 TACAA--A--AGTGATTCTGTTGCAAAC-GCTGAGTCC------TCGGGTTCAAATCCA- 1236
| || | ||| || || | || || | |||||| || | ||||||||||
Sbjct 1398 TT-AAGGACCAGTAATACTATCACACACAG-TGAGTCAGAAAAATCCGATTCAAATCCAA 1455
Query 1237 --TC-A-AC-G-A--TA-CAA-TTT-GTTCTGCATCTTGAAGGAGAGGAGGAGATGGTGG 1285
|| | || | | || | | ||| || ||||| |||||||||||||| | ||||||
Sbjct 1456 GCTCGAGACAGGACCTAGCGAGTTTTGTCCTGCACCTTGAAGGAGAGGACCCGCTGGTGG 1515
Query 1286 AC-TACATGGCACGGAGCAACCGTGTGGCCACAGACCACTTG-ATACAAAAAGGTCGGAA 1343
| | |||| ||||||||||| | || ||||| || ||| ||| | || || | |||
Sbjct 1516 ATGTG-ATGGTGCGGAGCAACCGGGAAGCGACAGATCA-TTGGATAGAGAAGGG-CAGAA 1572
Query 1344 -GAAACAACCCGTAAA-CTTGATAGAGCTCTTGGAGGCAACAACTCCCATCTCAAAAGGA 1401
||||||||| || || || ||||||||| ||||| |||||||| ||||| |||||||||
Sbjct 1573 AGAAACAACCAGTGAATCT-GATAGAGCTTTTGGAAGCAACAACACCCATTTCAAAAGGA 1631
Query 1402 TTTGAAGGGATC-CGAGACTTTGACAGCGACGAGGTCGCTTCTCTGGCCT-CTGGAGAGC 1459
||||||||||| | ||| || |||||| || |||| |||||||||||| | ||||| |
Sbjct 1632 TTTGAAGGGATTGC-AGAGTTCGACAGCAACAAGGTGGCTTCTCTGGCCCAC-GGAGAAC 1689
Query 1460 CACCTAATAGTTGGGCCCTTCCACTGGTAACACTGACGAGCATCGCTGTCGCTCTTCCTA 1519
| || ||| ||||||| || || || |||||||| || || || ||||| || |||||
Sbjct 1690 CGCCCAATTGTTGGGCTCTCCCGCTTGTAACACTCACAAGTATTGCTGTTGCACTTCCCG 1749
Query 1520 ACATCAAGCCTTACTCACTGAAGAAGTTAGTGAAAGCTGTAAACGAGGCATTGGTCTATG 1579
|||||||||| | ||| |||||||||||| | || ||||| ||||||||| ||| ||||
Sbjct 1750 ACATCAAGCCCTCCTCCCTGAAGAAGTTACTCAATGCTGTCAACGAGGCACTGGAATATG 1809
Query 1580 TCAACAAGTTCGAA-GACGTCTTAGACATCGGAGGAGAGTTAGCTAATAGCAGGAAAGCT 1638
|||||||||| ||| | |||| | || | ||||||||||| || ||| ||||||||||
Sbjct 1810 TCAACAAGTTTGAATG-CGTCCTGGATACCGGAGGAGAGTCAGTTAACCTCAGGAAAGCT 1868
Query 1639 GCAGAAGTAGTTTGGTTAGGAGTTGATCTCTACCATAAATGGCTCAACGTGGATCTTCGA 1698
|| || || |||||| |||| ||||||||||| || || ||| | | |||||||||||
Sbjct 1869 GCTGAGGTCGTTTGGCTAGGTGTTGATCTCTATCACAAGTGGTTTGATGTGGATCTTCGG 1928
Query 1699 AAACTATCCAAGAAACAAAGCAAAACACCACAAGAAGTTCTTAAAGAGCTGGTAGATATA 1758
|||||||| ||| ||||||| ||| | | | ||||| ||| |||||| | || ||
Sbjct 1929 AAACTATCAAAGCAACAAAG-AAATC-C-AGAAGAAACCCTTCGGGAGCTGATGGAAATC 1985
Query 1759 GCAAAGAAAGAGTT-TACAGAGTCATGGGAGAAAAACC-GTATACTATGCATGAAACATA 1816
|| ||||||||||| | ||||||||||| ||| |||| | || |||||||||| || |
Sbjct 1986 GCGAAGAAAGAGTTCT-CAGAGTCATGGCAGATGAACCTG-ATGGTATGCATGAAGCACA 2043
Query 1817 AGCCCTCTCAATGGCCCATCAAGACTCAAGCAGCAAACTCAATGTACCGAATCAGCCAAA 1876
|||||||||| |||||||||||||||| |||||| ||||| |||||||||||| | ||||
Sbjct 2044 AGCCCTCTCACTGGCCCATCAAGACTCTAGCAGCCAACTCCATGTACCGAATCTGTCAAA 2103
Query 1877 CTCTTTTGA-TGAAGT-ACGAATCAAGAAAC-ATTGAAACAGAGGA-GACTCTGTTGA-A 1931
| || | | | || | ||||||||||| || || ||| ||| ||| | ||||||||| |
Sbjct 2104 CAATTCT-ACT-AACTTACGAATCAAGAGACTATGGAA-CAGGGGAAG-CTCTGTTGAGA 2159
Query 1932 AGATG-TGGAGAGGATGGTATCGGACATAGTATCAGGATGCTTTTGCAACACGGCACAGG 1990
| | | |||| || | |||| |||||||| ||||| |||||||||||| ||||| |
Sbjct 2160 A-A-GCTGGAAAGCACAATATCAGACATAGTGTCAGGTTGCTTTTGCAACGTAGCACAAG 2217
Query 1991 TAATAGGAATGAAGTGTTTGGTGACAGCAGTGGAAGTGAGAGAAGCTTCCGTGAGAGAAG 2050
| ||| | |||||||||||| |||| || ||||| || |||| || || |||| ||
Sbjct 2218 TGATATCCGTCAAGTGTTTGGTGTCAGCTGTAGAAGTAAGGGAAGAATCAGTAAGAGGAG 2277
Query 2051 CGGCAATGCATTTGGGGAGAACAGAGAAGATACTTGAGATCGTGGACAGAAGA 2103
| || ||||| |||| |||||||||||||| || |||||| | || ||||||
Sbjct 2278 CAGCTCTGCATCTGGGAAGAACAGAGAAGATTCTAGAGATCTTAGAGAGAAGA 2330
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 113302630065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5