BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493156 Length=1581 Score E Sequences producing significant alignments: (Bits) Value AT4G17210.1 | Symbols: | Plant protein of unknown function (DU... 2412 0.0 > AT4G17210.1 | Symbols: | Plant protein of unknown function (DUF827) | chr4:9652585-9654257 REVERSE LENGTH=1584 Length=1584 Score = 2412 bits (1306), Expect = 0.0 Identities = 1494/1586 (94%), Gaps = 7/1586 (0%) Strand=Plus/Plus Query 1 ATGGCGAAGATCCGAACGGATGCTCCGGTGATACCTCCGGAGACTCCTCCTAGGAGCAGT 60 |||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 1 ATGGCGAAGATCAGAACGGATGCTCCGGTGATGCCTCCGGAGACTCCTCCTCGGAGCAGT 60 Query 61 GAGGTGGGAGAGATTGACACGCGCGCTCCCTTCCAATCCGTTAGAGACGCCGTTAGTTTA 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 61 GAGGTGGGAGAGATTGACACCCGCGCTCCCTTCCAATCCGTTAGAGACGCCCTTAGTTTA 120 Query 121 TTCCGTCAAGTTAGCTTTTCCAAGAAGCAACCA-C-CG-CATCT-CTCCTCCTCCTCTTC 176 ||||||||||||||||||||||||||||||||| | || | ||| ||||||||||||||| Sbjct 121 TTCCGTCAAGTTAGCTTTTCCAAGAAGCAACCACCTCGTC-TCTCCTCCTCCTCCTCTTC 179 Query 177 TCAGTCTCA-GTCTACAAAAACGGATGTGTCCGATAAGGAGATGCAACTTCTGTTGGCCG 235 ||||||||| | | |||| |||||||||||| ||||||||||||||||||||||| |||| Sbjct 180 TCAGTCTCAGGAC-ACAACAACGGATGTGTCGGATAAGGAGATGCAACTTCTGTTAGCCG 238 Query 236 AACAAGAAATGGATAGAGTCAAGCTGTGTCTTGATGGCTCTGTCGCAGCTAAAGCACAAG 295 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 239 AACAAGAAATGGATAGAGTCAAGATATGTCTTGATGGCTCTGTCGCAGCTAAAGCACAAG 298 Query 296 CTCTCTCTGATCTCGACTCTGCTCAACGAAAGGCCGCTGATTTAAGGGTTAAACTAGAAT 355 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 299 CTCTCTCTGATCTCGACTCTGCTCAACGAAAGGCTGCTGATTTAAGGGTTAAACTAGAAT 358 Query 356 CCATCAAACATTCCAGGAAATGTGCTATCTCTACCAAACACACCATGAATCAACGTTTAG 415 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 359 CCATCAAACATTCAAGGAAATGTGCTATCTCTACCAAACACACCATGAATCAACGGTTAG 418 Query 416 AACAACTTCAATCTGAAAACCAAGAAACAGAGAGCGCAAGAGAAGATTACATTTTAATTA 475 ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| Sbjct 419 AACAACTTCAATCTGAAAACCAAGAAACAGAGAGCACAAGAGAGGATTACATTTTGATTA 478 Query 476 CCGCGGAGCTGTTCATGGCGAAAAACGAGCTCGCGGAATTGAAACAACAGTTTAACCTCT 535 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 479 CCGCGGAGCTGTTCATGGCGAAATACGAGCTCGCGGAATTAAAACAACAGTTTAACCTCT 538 Query 536 CCGTGGAAGAAAGGCTAGCTGAACTTCAAAGGGCAGAGGAAGCAGAGTGTGCGTCTATGG 595 |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 539 CCGTGGAAGAGAGACTAGCTGAACTTCAGAGGGCAGAGGAAGCAGAGTGTGCGTCTATGG 598 Query 596 TTAACTCCAACAAGATCAAAGACATGTCACATGAGATAGCGGAAATGCGTGATGCTGCTG 655 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 599 TTAACTCCAACAAGATCAAAGACATGTCGCATGACATAGCGGAAATGCGTGATGCTGCTG 658 Query 656 AGCGGCTGAAGTCTGATGCTGTTAGGAAAAAGGAGGAAGAGGAAAAGATAAAGGAAGAGA 715 |||| || || |||||||||| |||||||| |||||||||||| ||||||||||||||| Sbjct 659 AGCGACTTAATTCTGATGCTGCAAGGAAAAAAGAGGAAGAGGAACAGATAAAGGAAGAGA 718 Query 716 GTATTGCCGCGAGAGAAACTTACGTGTCTAAGAAACAAGAAGCTAAGAAAAGGCTGGAGG 775 |||||||| ||||||||||||||||| |||||| | |||||||||| |||||||||||| Sbjct 719 GTATTGCCTTGAGAGAAACTTACGTGTGTAAGAAGCTAGAAGCTAAGCAAAGGCTGGAGG 778 Query 776 ATGTGAAGCAAGATTGTGACCCTGAGCTAAGGAAAGATATCGAGGAGCTAGCGGATATAT 835 || | |||| |||||||||||||||||||| ||||||||| |||||| || ||| |||| Sbjct 779 ATCTCAAGCGAGATTGTGACCCTGAGCTAAAGAAAGATATTGAGGAGTTAATGGAGATAT 838 Query 836 CTGCGGAAAACGAGAGGTTACAGGAGGAGATTAAACTAGCTCGTGAACTCAAAGAGGCTA 895 || | |||||||||||||||||||||||||||||||| || | || ||||||||||| | Sbjct 839 CTACCGAAAACGAGAGGTTACAGGAGGAGATTAAACTTTCTGGCGAGCTCAAAGAGGCAA 898 Query 896 AGAGTGCGATGCAAGAAATTTATGATGAAGAAAGCTCATACAAAAGCTTGGTGGGCTCAC 955 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 899 AGAGTGCGATGCAAGAAATTTATGATGAAGAAAGTTCATACAAAAGCTTGGTGGGTTCAC 958 Query 956 TCACTGTGGAATTGGATGGAGTGCagagagagaacagagaattgaagggaaaagagaagg 1015 ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 959 TCACTGTGGAATTAGATGGAGTGCAGAGAGAAAACAGAGAATTGAAGGGAAAGGAGAAGG 1018 Query 1016 agagacaaaaagttgaagaaggagaaTGGGTAGAAGCGAGTCGGAAAGTGGACGAAATCA 1075 |||||||| ||| |||||||||||||||||||||||||||||| ||||| || ||||||| Sbjct 1019 AGAGACAAGAAGCTGAAGAAGGAGAATGGGTAGAAGCGAGTCGTAAAGTTGATGAAATCA 1078 Query 1076 TGAGTGAAGCAGAGAAAACAAGAAAAGAAGCGGAAGAGATGAGGATGCACGTGGATGAAC 1135 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1079 TGCGTGAAGCAGAGAAAACAAGAAAAGAAGCGGAAGAGATGAGGATGAACGTGGATGAAC 1138 Query 1136 TCAGGAGAGAAGCAGCAGCAACACATATGGTAATGGGTGAAGCAGTGAAACAGCTCGAGA 1195 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1139 TCAGGAGAGAAGCAGCAGCAAAACATATGGTAATGGGTGAAGCAGTGAAACAGCTCGAGA 1198 Query 1196 TAGTTGGAAGAGCGGTGGAGAAAGCGAAAACCGCGGAGAAAAGAGCTGTGGAAGACATGA 1255 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1199 TAGTTGGAAGAGCGGTGGAGAAAGCGAAAACCGCAGAGAAAAGAGCTGTGGAAGACATGA 1258 Query 1256 AAGTTCTTACTGAGAAGAAAGAGAGTCTAACACATGATGAGCCTGATAAGAAGATTAGAA 1315 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1259 AAGTCCTTACTGAGAAGAAAGAGAGTCTAACACATGATGAGCCTGACAAGAAGATTAGAA 1318 Query 1316 TATCATTGAAAGAGTACGAAGAGTTGAGAGGAAAGCATGAAGAGTCAGAGAGAATGGTTC 1375 ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 1319 TATCACTGAAAGAGTACGAAGAATTGAGAGGAAAGCATGAAGAGTCAGAGAGAATGGTAC 1378 Query 1376 AGTTTAAAGCGAAAACGGTTGCTGCTCAACTCGAAGAGATCAATGAGAGCAGAATAGAAG 1435 |||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||| Sbjct 1379 AGTTTAAAGCGAAAACGGTTGCGGCTCAGCTGGAAGAGATCAATGAGAGCAGAATAGAAG 1438 Query 1436 GGGAGAGAAAGTTGGAGGAAAAGATTAAAGAGATGGAGGAGTTAAAAGCGGCGATTGATG 1495 |||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 1439 GGGAAAGAAAGTTGGAGGAGAAGATTAAAGAGATGGAGGAGTTAAAAGCTGCGATTGATG 1498 Query 1496 GCGCGTTGAGAAAAGCAGAGATTGCAGAGGAAGCACATTCTATTGTCGATGCTGAACTAA 1555 |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 1499 GCGCGTTGCGAAAAGCAGAGATTGCAGAGGAAGCACACAGTATTGTTGATGCTGAACTAA 1558 Query 1556 GAAAATGGAAACCGCAAGACTTGTAG 1581 ||||||||||||| |||||||||||| Sbjct 1559 GAAAATGGAAACCACAAGACTTGTAG 1584 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78061847475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5