BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg493294

Length=315
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G15910.1 | Symbols: ATDI21, DI21 | drought-induced 21 | chr4...   516    5e-146


> AT4G15910.1 | Symbols: ATDI21, DI21 | drought-induced 21 | chr4:9028461-9029423 
FORWARD LENGTH=665
Length=665

 Score =  516 bits (279),  Expect = 5e-146
 Identities = 303/315 (96%), Gaps = 0/315 (0%)
 Strand=Plus/Plus

Query  1    ATGGCCGCTCGTTCACTCTCCGGTGCCGTTAAATCTCTTTGCTCCGCCGCATCCGGCAGT  60
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  197  ATGGCCGCTCGTTCACTCTCCGGTGCCGTTAAATCTCTTTGCTCCGCCGCATCCGGAAGT  256

Query  61   CTTTCTCGTTCCATTGTCTTAAGAAGGAGTTACGTAGCGACATCGCAGAATGTGACAGCA  120
            || ||| |||||||||||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct  257  CTGTCTTGTTCCATTGTCTTAAGGAGGAGTTACGTTGCTACATCGCAGAATGTAACAGCA  316

Query  121  ACAGGATTGAGTAAGGGAGGTTCCACCAGAGTTATGGTGGGGAAGATGGAACAAAGAGCT  180
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct  317  GCAGGATTGAGTAAGGGAGGTTCCACCAGAGTTATGGTGGGGAAGATGGAACAGAGAGGT  376

Query  181  TTAGATCAAGAGGCAGAGTCTGCTTGGGGACCAGATCCAGTCACTGGATACTACAGACCT  240
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  377  TTAGATCAAGAGGCAGAGTCTGCTTGGGGACCAGATCCAGTTACTGGATACTACAGACCT  436

Query  241  TCCAATCGTGCGGCTGAGATTGATCCAGCTGAGCTCAGAGAGTTGCTCTTGAAAAACAAA  300
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  437  TCCAATCGTGCGGCTGAGATTGATCCAGCTGAGCTCAGAGAGTTGCTTTTGAAAAACAAA  496

Query  301  GCAAAGTCTTTCTGA  315
            |||||||||||||||
Sbjct  497  GCAAAGTCTTTCTGA  511



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14627914959


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5